RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PDE6HQ13956 83 aa5.34□□□□□ -1.55
USP48-203ENST00000374732 GCN1Q92616 2671 aaKnown RBP5.34□□□□□ -1.55
USP48-203ENST00000374732 NBEAQ8NFP9 2946 aa5.34□□□□□ -1.55
USP48-203ENST00000374732 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 LYZP61626 148 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 LAMA5O15230 3695 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 DMXL2Q8TDJ6 3036 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 DSCR9P59020 149 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 EGFEM1PQ0D2K5 195 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 FAM104AQ969W3 186 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 HIGD2AQ9BW72 106 aa5.33□□□□□ -1.56
USP48-203ENST00000374732 A0A1W2PPR1 153 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 P0C880 135 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 APELAP0DMC3 54 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 PRB3Q04118 309 aaPredicted RBP5.32□□□□□ -1.56
USP48-203ENST00000374732 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
USP48-203ENST00000374732 Q6ZQT0 140 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 Q8N3U1 123 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 PCNX1Q96RV3 2341 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 DNAJC9-AS1A6NH13 148 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 IGHV4-38-2P0DP08 117 aa5.32□□□□□ -1.56
USP48-203ENST00000374732 IGHV3-21A0A0B4J1V1 117 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 Q6ZR54 194 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 Q86TA4 180 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 DHRS4-AS1Q9P1J3 65 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 RP1L1Q8IWN7 2480 aaPredicted RBP5.31□□□□□ -1.56
USP48-203ENST00000374732 IGHV3-35A0A0C4DH35 117 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 CLPSL1A2RUU4 121 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 Q8N9W7 124 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 Q8NDZ9 215 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 AMELXQ99217 191 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 NAV3Q8IVL0 2385 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 TENM4Q6N022 2769 aa5.31□□□□□ -1.56
USP48-203ENST00000374732 IGF2RP11717 2491 aa5.3□□□□□ -1.56
USP48-203ENST00000374732 PKDREJQ9NTG1 2253 aa5.3□□□□□ -1.56
USP48-203ENST00000374732 IGHV7-81A0A0B4J1V7 117 aa5.3□□□□□ -1.56
USP48-203ENST00000374732 MIAQ16674 131 aa5.3□□□□□ -1.56
USP48-203ENST00000374732 ROS1P08922 2347 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 PIEZO2Q9H5I5 2752 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 ANKRD17O75179 2603 aaKnown RBP5.29□□□□□ -1.56
USP48-203ENST00000374732 IGHV3-74A0A0B4J1X5 117 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 A0A1B0GW54 56 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 CTSGP08311 255 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 IGHV3-30-3P0DP02 117 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 PRR4Q16378 134 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 ZNF625Q96I27 306 aaPredicted RBP5.29□□□□□ -1.56
USP48-203ENST00000374732 KLK15Q9H2R5 256 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 ANKHD1Q8IWZ3 2542 aaKnown RBP5.29□□□□□ -1.56
USP48-203ENST00000374732 CHD8Q9HCK8 2581 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 TLN1Q9Y490 2541 aaKnown RBP5.29□□□□□ -1.56
USP48-203ENST00000374732 KALRNO60229 2985 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 OBSCN-AS1Q96MR7 158 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
USP48-203ENST00000374732 ADGRG4Q8IZF6 3080 aa5.28□□□□□ -1.56
USP48-203ENST00000374732 CEP295Q9C0D2 2601 aa5.28□□□□□ -1.56
USP48-203ENST00000374732 BPY2O14599 106 aa5.28□□□□□ -1.56
USP48-203ENST00000374732 SMG1Q96Q15 3661 aaKnown RBP5.27□□□□□ -1.57
USP48-203ENST00000374732 TRBV6-5A0A0K0K1A5 114 aa5.27□□□□□ -1.57
USP48-203ENST00000374732 NCR3O14931 201 aa5.27□□□□□ -1.57
USP48-203ENST00000374732 RNASE1P07998 156 aaKnown RBP5.27□□□□□ -1.57
USP48-203ENST00000374732 HAMPP81172 84 aa5.27□□□□□ -1.57
USP48-203ENST00000374732 CSNK1G2-AS1Q8NCQ2 148 aa5.27□□□□□ -1.57
USP48-203ENST00000374732 A0A087X002 238 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 GAS8-AS1O95177 125 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 C5orf56Q8N8D9 126 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 Q8TAT8 98 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 IGLV5-52A0A0A0MRZ9 124 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 LECT2O14960 151 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 DEFB113Q30KQ7 82 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 ORMDL1Q9P0S3 153 aa5.26□□□□□ -1.57
USP48-203ENST00000374732 PPP1R17O96001 155 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 CRIP1P50238 77 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 ZNF462Q96JM2 2506 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 IGLV2-18A0A075B6J9 118 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 H3BUA1 57 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 RTL8CO15255 209 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 IGHV3-11P01762 117 aa5.25□□□□□ -1.57
USP48-203ENST00000374732 TPRP12270 2363 aaKnown RBP5.24□□□□□ -1.57
USP48-203ENST00000374732 HELZ2Q9BYK8 2649 aaKnown RBP5.24□□□□□ -1.57
USP48-203ENST00000374732 IGHV3OR16-8A0A075B7F1 116 aa5.24□□□□□ -1.57
USP48-203ENST00000374732 HRNRQ86YZ3 2850 aaPredicted RBP5.24□□□□□ -1.57
USP48-203ENST00000374732 CCL19Q99731 98 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 ZZEF1O43149 2961 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 CFAP46Q8IYW2 2715 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 K7ERS5 55 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 CR1P17927 2039 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 SPINK7P58062 85 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 USMG5Q96IX5 58 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 CNFNQ9BYD5 112 aa5.23□□□□□ -1.57
USP48-203ENST00000374732 IGHV3-73A0A0B4J1V6 119 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 TRBV10-1A0A0K0K1A3 114 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
USP48-203ENST00000374732 IGHV3-23P01764 117 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 SPAG11BQ08648 103 aa5.22□□□□□ -1.57
USP48-203ENST00000374732 SPAG11AQ6PDA7 123 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms