RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 AMELXQ99217 191 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 SPANXCQ9NY87 97 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 C16orf95Q9H693 158 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 LINC01546A6NGU7 62 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 XGP55808 180 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
HERC4-202ENST00000373700 ORMDL1Q9P0S3 153 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 TRBV30A0A0K0K1B3 111 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 LINC00959A0A1B0GUT2 108 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 H3BT86 120 aa5.55□□□□□ -1.52
HERC4-202ENST00000373700 KRTAP1-1Q07627 177 aa5.54□□□□□ -1.52
HERC4-202ENST00000373700 C9orf116Q5BN46 136 aaPredicted RBP5.54□□□□□ -1.52
HERC4-202ENST00000373700 NKAPP1Q8N9T2 125 aa5.54□□□□□ -1.52
HERC4-202ENST00000373700 NTM-AS1Q6ZSK4 140 aa5.54□□□□□ -1.52
HERC4-202ENST00000373700 C11orf45Q8TAV5 145 aa5.54□□□□□ -1.52
HERC4-202ENST00000373700 BEAN1Q3B7T3 259 aa5.54□□□□□ -1.52
HERC4-202ENST00000373700 SPATA3Q8NHX4 192 aa5.54□□□□□ -1.52
HERC4-202ENST00000373700 BSNQ9UPA5 3926 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 H0YGX0 51 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 SHISA2Q6UWI4 295 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 SS18L2Q9UHA2 77 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 H7C423 109 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
HERC4-202ENST00000373700 FHL3Q13643 280 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 FHL2Q14192 279 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 KLK9Q2XQG4 91 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 DEFB131BA0A096LNP1 70 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 KRTAP24-1Q3LI83 254 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 RNF183Q96D59 192 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 SPANXDQ9BXN6 97 aa5.53□□□□□ -1.52
HERC4-202ENST00000373700 CCL18P55774 89 aa5.52□□□□□ -1.53
HERC4-202ENST00000373700 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
HERC4-202ENST00000373700 A0A0J9YWU9 116 aa5.52□□□□□ -1.53
HERC4-202ENST00000373700 UBL5Q9BZL1 73 aa5.52□□□□□ -1.53
HERC4-202ENST00000373700 LYRM9A8MSI8 78 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 LST1O00453 97 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 NBPF19A0A087WUL8 3843 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 IBA57-AS1B1ANH7 110 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 C6orf99Q4VX62 202 aa5.51□□□□□ -1.53
HERC4-202ENST00000373700 SMCPP49901 116 aaPredicted RBP5.5□□□□□ -1.53
HERC4-202ENST00000373700 Q6ZTC4 211 aa5.5□□□□□ -1.53
HERC4-202ENST00000373700 CELA1Q9UNI1 258 aa5.5□□□□□ -1.53
HERC4-202ENST00000373700 KPRPQ5T749 579 aaPredicted RBP5.5□□□□□ -1.53
HERC4-202ENST00000373700 KMT2BQ9UMN6 2715 aaPredicted RBP5.5□□□□□ -1.53
HERC4-202ENST00000373700 ZFHX3Q15911 3703 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 MIFP14174 115 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 UNQ6190/PRO20217Q6UXQ8 127 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 TIMM17BO60830 172 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 GHRHP01286 108 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 SDIM1Q6ZPB5 146 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
HERC4-202ENST00000373700 Q8N3U1 123 aa5.49□□□□□ -1.53
HERC4-202ENST00000373700 OTOGQ6ZRI0 2925 aa5.48□□□□□ -1.53
HERC4-202ENST00000373700 CD164L2Q6UWJ8 174 aa5.48□□□□□ -1.53
HERC4-202ENST00000373700 SPATA25Q9BR10 227 aa5.48□□□□□ -1.53
HERC4-202ENST00000373700 C6orf223Q8N319 242 aa5.47□□□□□ -1.53
HERC4-202ENST00000373700 A8MTW9 85 aa5.47□□□□□ -1.53
HERC4-202ENST00000373700 ACYP1P07311 99 aa5.47□□□□□ -1.53
HERC4-202ENST00000373700 CXCL5P42830 114 aa5.47□□□□□ -1.53
HERC4-202ENST00000373700 A0A087WZ39 114 aa5.46□□□□□ -1.53
HERC4-202ENST00000373700 A0A1B0GX51 115 aa5.46□□□□□ -1.53
HERC4-202ENST00000373700 CYSRT1A8MQ03 144 aa5.46□□□□□ -1.53
HERC4-202ENST00000373700 NDUFV3P56181 108 aaKnown RBP5.46□□□□□ -1.53
HERC4-202ENST00000373700 PRO0461Q9UI25 63 aa5.46□□□□□ -1.53
HERC4-202ENST00000373700 IGKV2-24A0A0C4DH68 120 aa5.46□□□□□ -1.54
HERC4-202ENST00000373700 SOSTDC1Q6X4U4 206 aa5.46□□□□□ -1.54
HERC4-202ENST00000373700 TRACP01848 142 aa5.46□□□□□ -1.54
HERC4-202ENST00000373700 UBE2BP63146 152 aa5.46□□□□□ -1.54
HERC4-202ENST00000373700 LINC00337Q8N6G1 96 aa5.46□□□□□ -1.54
HERC4-202ENST00000373700 KIR2DL5BQ8NHK3 375 aa5.46□□□□□ -1.54
HERC4-202ENST00000373700 CSDC2Q9Y534 153 aaKnown RBP5.46□□□□□ -1.54
HERC4-202ENST00000373700 FBN1P35555 2871 aaKnown RBP5.46□□□□□ -1.54
HERC4-202ENST00000373700 A0A087WYN8 130 aa5.45□□□□□ -1.54
HERC4-202ENST00000373700 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
HERC4-202ENST00000373700 RBM3P98179 157 aaKnown RBP5.45□□□□□ -1.54
HERC4-202ENST00000373700 SCXQ7RTU7 201 aa5.45□□□□□ -1.54
HERC4-202ENST00000373700 TENM1Q9UKZ4 2725 aa5.45□□□□□ -1.54
HERC4-202ENST00000373700 IGKV2-28A0A075B6P5 120 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 IGKV2D-28P01615 120 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 SMIM20Q8N5G0 67 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 TRAV23DV6A0A075B6W5 121 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 IGHV3OR16-9A0A0B4J2B5 98 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 M0R2N4 97 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 Q6ZQY7 126 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 LINC00643Q86TS7 51 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.44□□□□□ -1.54
HERC4-202ENST00000373700 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 LELP1Q5T871 98 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 CDIP1Q9H305 208 aa5.44□□□□□ -1.54
HERC4-202ENST00000373700 X6R8D5 127 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms