RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 COX7A2LO14548 114 aa13.34□□□□□ -0.27
HDAC1-201ENST00000373548 Q8IZM0 81 aa13.34□□□□□ -0.27
HDAC1-201ENST00000373548 TRBV20-1A0A075B6N2 111 aa13.33□□□□□ -0.28
HDAC1-201ENST00000373548 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
HDAC1-201ENST00000373548 MIR7-3HGQ8N6C7 128 aa13.33□□□□□ -0.28
HDAC1-201ENST00000373548 PRR34Q9NV39 138 aa13.33□□□□□ -0.28
HDAC1-201ENST00000373548 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
HDAC1-201ENST00000373548 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
HDAC1-201ENST00000373548 IBA57-AS1B1ANH7 110 aa13.32□□□□□ -0.28
HDAC1-201ENST00000373548 MDFIQ99750 246 aa13.32□□□□□ -0.28
HDAC1-201ENST00000373548 TRIAP1O43715 76 aa13.31□□□□□ -0.28
HDAC1-201ENST00000373548 RPL13AP40429 203 aaKnown RBP13.31□□□□□ -0.28
HDAC1-201ENST00000373548 FOXI1Q12951 378 aa13.31□□□□□ -0.28
HDAC1-201ENST00000373548 NBEAL1Q6ZS30 2694 aa13.31□□□□□ -0.28
HDAC1-201ENST00000373548 DEFB131BA0A096LNP1 70 aa13.31□□□□□ -0.28
HDAC1-201ENST00000373548 LINC00158P58513 81 aa13.31□□□□□ -0.28
HDAC1-201ENST00000373548 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
HDAC1-201ENST00000373548 TM2D3Q9BRN9 247 aa13.3□□□□□ -0.28
HDAC1-201ENST00000373548 KIAA0087Q14695 138 aa13.3□□□□□ -0.28
HDAC1-201ENST00000373548 ENHOQ6UWT2 76 aa13.3□□□□□ -0.28
HDAC1-201ENST00000373548 C2orf82Q6UX34 121 aa13.3□□□□□ -0.28
HDAC1-201ENST00000373548 WFDC10BQ8IUB3 73 aa13.3□□□□□ -0.28
HDAC1-201ENST00000373548 PFN2P35080 140 aa13.28□□□□□ -0.28
HDAC1-201ENST00000373548 SMCPP49901 116 aaPredicted RBP13.28□□□□□ -0.28
HDAC1-201ENST00000373548 GAGE12HA6NDE8 117 aa13.28□□□□□ -0.28
HDAC1-201ENST00000373548 MALP21145 153 aa13.28□□□□□ -0.28
HDAC1-201ENST00000373548 ESRGQ1W209 222 aa13.27□□□□□ -0.28
HDAC1-201ENST00000373548 DEFB121Q5J5C9 76 aa13.27□□□□□ -0.28
HDAC1-201ENST00000373548 MRAPQ8TCY5 172 aa13.27□□□□□ -0.28
HDAC1-201ENST00000373548 K7ERU9 68 aa13.27□□□□□ -0.29
HDAC1-201ENST00000373548 CKS1BP61024 79 aa13.25□□□□□ -0.29
HDAC1-201ENST00000373548 ETDBQ3ZM63 59 aa13.25□□□□□ -0.29
HDAC1-201ENST00000373548 CCL18P55774 89 aa13.24□□□□□ -0.29
HDAC1-201ENST00000373548 CFAP161Q6P656 301 aa13.24□□□□□ -0.29
HDAC1-201ENST00000373548 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
HDAC1-201ENST00000373548 SND1-IT1Q9HBX3 110 aa13.24□□□□□ -0.29
HDAC1-201ENST00000373548 CRPP02741 224 aa13.23□□□□□ -0.29
HDAC1-201ENST00000373548 CXCL5P42830 114 aa13.23□□□□□ -0.29
HDAC1-201ENST00000373548 MGAM2Q2M2H8 2515 aa13.23□□□□□ -0.29
HDAC1-201ENST00000373548 KLK5Q9Y337 293 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-201ENST00000373548 COX6CP09669 75 aa13.22□□□□□ -0.29
HDAC1-201ENST00000373548 ATXN8Q156A1 80 aa13.22□□□□□ -0.29
HDAC1-201ENST00000373548 RNF151Q2KHN1 245 aa13.22□□□□□ -0.29
HDAC1-201ENST00000373548 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.3
HDAC1-201ENST00000373548 TRAV8-4A0A0B4J246 113 aa13.21□□□□□ -0.3
HDAC1-201ENST00000373548 IGKV2D-28P01615 120 aa13.21□□□□□ -0.3
HDAC1-201ENST00000373548 TRAV10A0A0B4J240 114 aa13.2□□□□□ -0.3
HDAC1-201ENST00000373548 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
HDAC1-201ENST00000373548 C9JAW5 83 aa13.19□□□□□ -0.3
HDAC1-201ENST00000373548 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
HDAC1-201ENST00000373548 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
HDAC1-201ENST00000373548 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
HDAC1-201ENST00000373548 TRAV13-2A0A0B4J235 113 aa13.18□□□□□ -0.3
HDAC1-201ENST00000373548 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
HDAC1-201ENST00000373548 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
HDAC1-201ENST00000373548 SLC25A20O43772 301 aa13.16□□□□□ -0.3
HDAC1-201ENST00000373548 COX17Q14061 63 aa13.16□□□□□ -0.3
HDAC1-201ENST00000373548 C9orf116Q5BN46 136 aaPredicted RBP13.16□□□□□ -0.3
HDAC1-201ENST00000373548 LINC01556Q5JQF7 62 aa13.16□□□□□ -0.3
HDAC1-201ENST00000373548 KRTAP26-1Q6PEX3 210 aa13.16□□□□□ -0.3
HDAC1-201ENST00000373548 LINC00526Q96FQ7 95 aa13.16□□□□□ -0.3
HDAC1-201ENST00000373548 C10orf25Q5T742 122 aa13.15□□□□□ -0.3
HDAC1-201ENST00000373548 LST1O00453 97 aa13.15□□□□□ -0.3
HDAC1-201ENST00000373548 UNQ6190/PRO20217Q6UXQ8 127 aa13.15□□□□□ -0.3
HDAC1-201ENST00000373548 C15orf53Q8NAA6 179 aa13.14□□□□□ -0.31
HDAC1-201ENST00000373548 TEN1Q86WV5 123 aa13.13□□□□□ -0.31
HDAC1-201ENST00000373548 DNHD1Q96M86 4753 aa13.13□□□□□ -0.31
HDAC1-201ENST00000373548 M0QXV9 152 aa13.12□□□□□ -0.31
HDAC1-201ENST00000373548 VPS25Q9BRG1 176 aa13.12□□□□□ -0.31
HDAC1-201ENST00000373548 RPL28P46779 137 aaKnown RBP13.11□□□□□ -0.31
HDAC1-201ENST00000373548 TRBV10-2A0A0K0K1G8 114 aa13.1□□□□□ -0.31
HDAC1-201ENST00000373548 ANKRD29Q8N6D5 301 aa13.1□□□□□ -0.31
HDAC1-201ENST00000373548 DNAH10OSP0CZ25 163 aa13.1□□□□□ -0.31
HDAC1-201ENST00000373548 NTN5Q8WTR8 489 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-201ENST00000373548 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
HDAC1-201ENST00000373548 LINC00588Q9Y4M8 146 aa13.09□□□□□ -0.31
HDAC1-201ENST00000373548 J3QR89 54 aa13.08□□□□□ -0.32
HDAC1-201ENST00000373548 SMIM11BQ8TCY0 68 aa13.08□□□□□ -0.32
HDAC1-201ENST00000373548 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
HDAC1-201ENST00000373548 C1orf43Q9BWL3 253 aa13.07□□□□□ -0.32
HDAC1-201ENST00000373548 GVQW2A0A096LPI5 108 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-201ENST00000373548 PPDPFLQ8WWR9 84 aa13.06□□□□□ -0.32
HDAC1-201ENST00000373548 NDUFC2O95298 119 aa13.06□□□□□ -0.32
HDAC1-201ENST00000373548 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
HDAC1-201ENST00000373548 OR13C6PQ8NH95 151 aa13.06□□□□□ -0.32
HDAC1-201ENST00000373548 C6orf48Q9UBA6 75 aa13.06□□□□□ -0.32
HDAC1-201ENST00000373548 CBY1Q9Y3M2 126 aa13.06□□□□□ -0.32
HDAC1-201ENST00000373548 PRR3P79522 188 aaKnown RBP13.05□□□□□ -0.32
HDAC1-201ENST00000373548 C15orf56Q8N910 161 aa13.05□□□□□ -0.32
HDAC1-201ENST00000373548 C4orf48Q5BLP8 95 aa13.04□□□□□ -0.32
HDAC1-201ENST00000373548 MUC7Q8TAX7 377 aa13.04□□□□□ -0.32
HDAC1-201ENST00000373548 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
HDAC1-201ENST00000373548 IGKV2D-24A0A075B6R9 120 aa13.04□□□□□ -0.32
HDAC1-201ENST00000373548 H3BT86 120 aa13.04□□□□□ -0.32
HDAC1-201ENST00000373548 Q8NDZ9 215 aa13.04□□□□□ -0.32
HDAC1-201ENST00000373548 ZNF561-AS1K7EIQ3 104 aa13.03□□□□□ -0.32
HDAC1-201ENST00000373548 Q9HAA7 133 aa13.01□□□□□ -0.33
HDAC1-201ENST00000373548 TRACP01848 142 aa13.01□□□□□ -0.33
HDAC1-201ENST00000373548 CAMK2N2Q96S95 79 aa13.01□□□□□ -0.33
HDAC1-201ENST00000373548 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms