RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 Q96MF0 132 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 VPS13CQ709C8 3753 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 BLCAPP62952 87 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 CFHR3Q02985 330 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 Q6ZTI0 123 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 HRNRQ86YZ3 2850 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-201ENST00000373019 DEFB113Q30KQ7 82 aa6.76□□□□□ -1.33
SF3A3-201ENST00000373019 MINOS1-NBL1R4GNA1 71 aa6.76□□□□□ -1.33
SF3A3-201ENST00000373019 A0A1W2PPR1 153 aa6.76□□□□□ -1.33
SF3A3-201ENST00000373019 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
SF3A3-201ENST00000373019 SMR3AQ99954 134 aa6.75□□□□□ -1.33
SF3A3-201ENST00000373019 SPINK13Q1W4C9 94 aa6.75□□□□□ -1.33
SF3A3-201ENST00000373019 STAB1Q9NY15 2570 aa6.75□□□□□ -1.33
SF3A3-201ENST00000373019 MPLKIPQ8TAP9 179 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 DSCR9P59020 149 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 WNK1Q9H4A3 2382 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 PRM2P04554 102 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 CCL18P55774 89 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 C5orf56Q8N8D9 126 aa6.74□□□□□ -1.33
SF3A3-201ENST00000373019 TRBV7-4A0A0J9YYF1 115 aa6.73□□□□□ -1.33
SF3A3-201ENST00000373019 JMJD7-PLA2G4BH0Y9G9 81 aa6.73□□□□□ -1.33
SF3A3-201ENST00000373019 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
SF3A3-201ENST00000373019 SORL1Q92673 2214 aa6.73□□□□□ -1.33
SF3A3-201ENST00000373019 IGHV3-11P01762 117 aa6.73□□□□□ -1.33
SF3A3-201ENST00000373019 ZFP36P26651 326 aaKnown RBP6.73□□□□□ -1.33
SF3A3-201ENST00000373019 DGAT2L7PQ6IED9 249 aa6.72□□□□□ -1.33
SF3A3-201ENST00000373019 TM2D3Q9BRN9 247 aa6.72□□□□□ -1.33
SF3A3-201ENST00000373019 COL6A5A8TX70 2615 aa6.72□□□□□ -1.33
SF3A3-201ENST00000373019 LINC01547P58512 204 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-201ENST00000373019 FBN2P35556 2912 aa6.72□□□□□ -1.33
SF3A3-201ENST00000373019 IBA57-AS1B1ANH7 110 aa6.72□□□□□ -1.33
SF3A3-201ENST00000373019 M0R2N4 97 aa6.71□□□□□ -1.33
SF3A3-201ENST00000373019 CUBNO60494 3623 aa6.71□□□□□ -1.33
SF3A3-201ENST00000373019 A0A096LNT2 108 aa6.71□□□□□ -1.34
SF3A3-201ENST00000373019 NDUFC1O43677 76 aa6.71□□□□□ -1.34
SF3A3-201ENST00000373019 HTN1P15515 57 aa6.71□□□□□ -1.34
SF3A3-201ENST00000373019 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
SF3A3-201ENST00000373019 LY6G6DO95868 133 aa6.7□□□□□ -1.34
SF3A3-201ENST00000373019 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-201ENST00000373019 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
SF3A3-201ENST00000373019 MIFP14174 115 aa6.7□□□□□ -1.34
SF3A3-201ENST00000373019 SAA4P35542 130 aa6.7□□□□□ -1.34
SF3A3-201ENST00000373019 K7EQG2 157 aa6.7□□□□□ -1.34
SF3A3-201ENST00000373019 Q8N814 137 aa6.7□□□□□ -1.34
SF3A3-201ENST00000373019 PRR15Q8IV56 129 aa6.69□□□□□ -1.34
SF3A3-201ENST00000373019 TMEM256-PLSCR3K7ERE1 68 aa6.69□□□□□ -1.34
SF3A3-201ENST00000373019 IGHV3-53P01767 116 aa6.69□□□□□ -1.34
SF3A3-201ENST00000373019 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
SF3A3-201ENST00000373019 Q6ZQT0 140 aa6.69□□□□□ -1.34
SF3A3-201ENST00000373019 Q6ZRU5 148 aa6.69□□□□□ -1.34
SF3A3-201ENST00000373019 NBEAL1Q6ZS30 2694 aa6.68□□□□□ -1.34
SF3A3-201ENST00000373019 Q8N3U1 123 aa6.68□□□□□ -1.34
SF3A3-201ENST00000373019 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
SF3A3-201ENST00000373019 LINC00158P58513 81 aa6.68□□□□□ -1.34
SF3A3-201ENST00000373019 NANOS2P60321 138 aaKnown RBP6.68□□□□□ -1.34
SF3A3-201ENST00000373019 TRBV6-4A0A1B0GX49 114 aa6.68□□□□□ -1.34
SF3A3-201ENST00000373019 C11orf71Q6IPW1 123 aa6.67□□□□□ -1.34
SF3A3-201ENST00000373019 NTM-AS1Q6ZSK4 140 aa6.67□□□□□ -1.34
SF3A3-201ENST00000373019 Q6ZVQ6 151 aa6.67□□□□□ -1.34
SF3A3-201ENST00000373019 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
SF3A3-201ENST00000373019 TMEM89A2RUT3 159 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 MOB4Q9Y3A3 225 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 HAMPP81172 84 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 Q6ZTC4 211 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 PLAC8L1A1L4L8 177 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 PAX4O43316 350 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 TMEM254Q8TBM7 123 aa6.66□□□□□ -1.34
SF3A3-201ENST00000373019 ESRGQ1W209 222 aa6.65□□□□□ -1.34
SF3A3-201ENST00000373019 USMG5Q96IX5 58 aa6.65□□□□□ -1.34
SF3A3-201ENST00000373019 IGHV4-30-2A0A087WSY4 118 aa6.65□□□□□ -1.34
SF3A3-201ENST00000373019 A0A087WZ39 114 aa6.65□□□□□ -1.34
SF3A3-201ENST00000373019 K7EMT4 169 aa6.65□□□□□ -1.35
SF3A3-201ENST00000373019 OTOGQ6ZRI0 2925 aa6.65□□□□□ -1.35
SF3A3-201ENST00000373019 K7EQD1 137 aa6.64□□□□□ -1.35
SF3A3-201ENST00000373019 CXCL6P80162 114 aa6.64□□□□□ -1.35
SF3A3-201ENST00000373019 TOMM7Q9P0U1 55 aa6.64□□□□□ -1.35
SF3A3-201ENST00000373019 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
SF3A3-201ENST00000373019 B4DSR2 109 aa6.63□□□□□ -1.35
SF3A3-201ENST00000373019 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
SF3A3-201ENST00000373019 NREPQ16612 68 aa6.63□□□□□ -1.35
SF3A3-201ENST00000373019 MGAM2Q2M2H8 2515 aa6.63□□□□□ -1.35
SF3A3-201ENST00000373019 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
SF3A3-201ENST00000373019 C11orf68Q9H3H3 251 aaKnown RBP6.62□□□□□ -1.35
SF3A3-201ENST00000373019 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
SF3A3-201ENST00000373019 LINC01356Q8N9X3 169 aa6.62□□□□□ -1.35
SF3A3-201ENST00000373019 IGHV4-61A0A0C4DH41 118 aa6.61□□□□□ -1.35
SF3A3-201ENST00000373019 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
SF3A3-201ENST00000373019 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
SF3A3-201ENST00000373019 H3BUA1 57 aa6.61□□□□□ -1.35
SF3A3-201ENST00000373019 IGLV1-40P01703 118 aa6.61□□□□□ -1.35
SF3A3-201ENST00000373019 SPATA3Q8NHX4 192 aa6.61□□□□□ -1.35
SF3A3-201ENST00000373019 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 MSMBP08118 114 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 Q6ZRP5 223 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
SF3A3-201ENST00000373019 CD164Q04900 197 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 338.9 ms