RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 LINC01561Q8N1V8 128 aa12.24□□□□□ -0.45
CTSA-204ENST00000372484 VPS25Q9BRG1 176 aa12.24□□□□□ -0.45
CTSA-204ENST00000372484 IBA57-AS1B1ANH7 110 aa12.23□□□□□ -0.45
CTSA-204ENST00000372484 LYPD5Q6UWN5 251 aa12.23□□□□□ -0.45
CTSA-204ENST00000372484 PPDPFQ9H3Y8 114 aa12.23□□□□□ -0.45
CTSA-204ENST00000372484 COX7A2LO14548 114 aa12.23□□□□□ -0.45
CTSA-204ENST00000372484 COX6CP09669 75 aa12.23□□□□□ -0.45
CTSA-204ENST00000372484 Q8IZM0 81 aa12.23□□□□□ -0.45
CTSA-204ENST00000372484 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
CTSA-204ENST00000372484 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
CTSA-204ENST00000372484 A0A0J9YWU9 116 aa12.22□□□□□ -0.45
CTSA-204ENST00000372484 H3BNG1 76 aa12.22□□□□□ -0.45
CTSA-204ENST00000372484 ATXN8Q156A1 80 aa12.22□□□□□ -0.45
CTSA-204ENST00000372484 PFN2P35080 140 aa12.21□□□□□ -0.45
CTSA-204ENST00000372484 MALP21145 153 aa12.2□□□□□ -0.46
CTSA-204ENST00000372484 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
CTSA-204ENST00000372484 NBEAL1Q6ZS30 2694 aa12.2□□□□□ -0.46
CTSA-204ENST00000372484 C9JAW5 83 aa12.19□□□□□ -0.46
CTSA-204ENST00000372484 C2orf82Q6UX34 121 aa12.19□□□□□ -0.46
CTSA-204ENST00000372484 CKS1BP61024 79 aa12.19□□□□□ -0.46
CTSA-204ENST00000372484 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
CTSA-204ENST00000372484 NANOS2P60321 138 aaKnown RBP12.17□□□□□ -0.46
CTSA-204ENST00000372484 FOXI1Q12951 378 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 J3QR89 54 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 SLC25A20O43772 301 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 PRB2P02812 416 aaPredicted RBP12.17□□□□□ -0.46
CTSA-204ENST00000372484 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 C11orf45Q8TAV5 145 aa12.17□□□□□ -0.46
CTSA-204ENST00000372484 KIAA0087Q14695 138 aa12.16□□□□□ -0.46
CTSA-204ENST00000372484 LINC01620Q4KN68 170 aa12.16□□□□□ -0.46
CTSA-204ENST00000372484 CCL18P55774 89 aa12.16□□□□□ -0.46
CTSA-204ENST00000372484 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
CTSA-204ENST00000372484 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
CTSA-204ENST00000372484 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
CTSA-204ENST00000372484 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
CTSA-204ENST00000372484 CXCL5P42830 114 aa12.14□□□□□ -0.47
CTSA-204ENST00000372484 ENHOQ6UWT2 76 aa12.14□□□□□ -0.47
CTSA-204ENST00000372484 TEN1Q86WV5 123 aa12.14□□□□□ -0.47
CTSA-204ENST00000372484 WFDC10BQ8IUB3 73 aa12.14□□□□□ -0.47
CTSA-204ENST00000372484 CRPP02741 224 aa12.13□□□□□ -0.47
CTSA-204ENST00000372484 IGKV2-28A0A075B6P5 120 aa12.13□□□□□ -0.47
CTSA-204ENST00000372484 IGKV2D-28P01615 120 aa12.13□□□□□ -0.47
CTSA-204ENST00000372484 LST1O00453 97 aa12.12□□□□□ -0.47
CTSA-204ENST00000372484 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
CTSA-204ENST00000372484 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
CTSA-204ENST00000372484 ANKRD29Q8N6D5 301 aa12.11□□□□□ -0.47
CTSA-204ENST00000372484 M0QXV9 152 aa12.11□□□□□ -0.47
CTSA-204ENST00000372484 SPATA25Q9BR10 227 aa12.11□□□□□ -0.47
CTSA-204ENST00000372484 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
CTSA-204ENST00000372484 ESRGQ1W209 222 aa12.1□□□□□ -0.47
CTSA-204ENST00000372484 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
CTSA-204ENST00000372484 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
CTSA-204ENST00000372484 PPDPFLQ8WWR9 84 aa12.1□□□□□ -0.47
CTSA-204ENST00000372484 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
CTSA-204ENST00000372484 SPAG11BQ08648 103 aa12.09□□□□□ -0.47
CTSA-204ENST00000372484 COX17Q14061 63 aa12.09□□□□□ -0.47
CTSA-204ENST00000372484 K7EIL1 84 aa12.08□□□□□ -0.47
CTSA-204ENST00000372484 MRAPQ8TCY5 172 aa12.08□□□□□ -0.47
CTSA-204ENST00000372484 MGAM2Q2M2H8 2515 aa12.08□□□□□ -0.48
CTSA-204ENST00000372484 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
CTSA-204ENST00000372484 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
CTSA-204ENST00000372484 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
CTSA-204ENST00000372484 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
CTSA-204ENST00000372484 RPL28P46779 137 aaKnown RBP12.05□□□□□ -0.48
CTSA-204ENST00000372484 LINC00526Q96FQ7 95 aa12.05□□□□□ -0.48
CTSA-204ENST00000372484 LINC01600Q96MT4 127 aa12.05□□□□□ -0.48
CTSA-204ENST00000372484 UNQ6190/PRO20217Q6UXQ8 127 aa12.04□□□□□ -0.48
CTSA-204ENST00000372484 H3BT86 120 aa12.04□□□□□ -0.48
CTSA-204ENST00000372484 C10orf25Q5T742 122 aa12.04□□□□□ -0.48
CTSA-204ENST00000372484 OR13C6PQ8NH95 151 aa12.04□□□□□ -0.48
CTSA-204ENST00000372484 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
CTSA-204ENST00000372484 SMIM11BQ8TCY0 68 aa12.03□□□□□ -0.48
CTSA-204ENST00000372484 TRAV10A0A0B4J240 114 aa12.02□□□□□ -0.48
CTSA-204ENST00000372484 LINC01556Q5JQF7 62 aa12.01□□□□□ -0.49
CTSA-204ENST00000372484 FAM218AQ96MZ4 157 aa11.99□□□□□ -0.49
CTSA-204ENST00000372484 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
CTSA-204ENST00000372484 NDUFC2O95298 119 aa11.99□□□□□ -0.49
CTSA-204ENST00000372484 TRACP01848 142 aa11.99□□□□□ -0.49
CTSA-204ENST00000372484 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
CTSA-204ENST00000372484 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
CTSA-204ENST00000372484 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
CTSA-204ENST00000372484 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
CTSA-204ENST00000372484 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
CTSA-204ENST00000372484 PCP4P48539 62 aa11.96□□□□□ -0.49
CTSA-204ENST00000372484 C1orf43Q9BWL3 253 aa11.96□□□□□ -0.49
CTSA-204ENST00000372484 HIGD2BQ4VC39 106 aa11.96□□□□□ -0.5
CTSA-204ENST00000372484 GVQW2A0A096LPI5 108 aaPredicted RBP11.95□□□□□ -0.5
CTSA-204ENST00000372484 MDFIQ99750 246 aa11.95□□□□□ -0.5
CTSA-204ENST00000372484 H0YGX0 51 aa11.95□□□□□ -0.5
CTSA-204ENST00000372484 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
CTSA-204ENST00000372484 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
CTSA-204ENST00000372484 IGKV2D-24A0A075B6R9 120 aa11.93□□□□□ -0.5
CTSA-204ENST00000372484 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
CTSA-204ENST00000372484 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
CTSA-204ENST00000372484 Q8NDZ9 215 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 TMEM126AQ9H061 195 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 LINC00588Q9Y4M8 146 aa11.92□□□□□ -0.5
CTSA-204ENST00000372484 A0A087WYN8 130 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms