RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ATRQ13535 2644 aa19.98■□□□□ 0.79
SSBP3-204ENST00000371320 C11orf68Q9H3H3 251 aaKnown RBP19.97■□□□□ 0.79
SSBP3-204ENST00000371320 TRAV26-1A0A087WT03 109 aa19.96■□□□□ 0.79
SSBP3-204ENST00000371320 MT-ATP8P03928 68 aa19.96■□□□□ 0.79
SSBP3-204ENST00000371320 LINC00269Q8N2A0 174 aa19.96■□□□□ 0.79
SSBP3-204ENST00000371320 CCL18P55774 89 aa19.95■□□□□ 0.78
SSBP3-204ENST00000371320 TEP1Q99973 2627 aaKnown RBP19.95■□□□□ 0.78
SSBP3-204ENST00000371320 IGKV2-28A0A075B6P5 120 aa19.95■□□□□ 0.78
SSBP3-204ENST00000371320 IGKV2D-28P01615 120 aa19.95■□□□□ 0.78
SSBP3-204ENST00000371320 IGHV4-30-4P0DP06 118 aa19.95■□□□□ 0.78
SSBP3-204ENST00000371320 SPART-AS1P0CW21 52 aa19.94■□□□□ 0.78
SSBP3-204ENST00000371320 LINC00337Q8N6G1 96 aa19.94■□□□□ 0.78
SSBP3-204ENST00000371320 Q8IZM0 81 aa19.93■□□□□ 0.78
SSBP3-204ENST00000371320 LINC01561Q8N1V8 128 aa19.93■□□□□ 0.78
SSBP3-204ENST00000371320 WIPF1O43516 503 aa19.91■□□□□ 0.78
SSBP3-204ENST00000371320 ANGP03950 147 aaKnown RBP19.91■□□□□ 0.78
SSBP3-204ENST00000371320 RPL28P46779 137 aaKnown RBP19.9■□□□□ 0.78
SSBP3-204ENST00000371320 TRAV8-4A0A0B4J246 113 aa19.9■□□□□ 0.78
SSBP3-204ENST00000371320 HTN3P15516 51 aa19.9■□□□□ 0.78
SSBP3-204ENST00000371320 CD164L2Q6UWJ8 174 aa19.89■□□□□ 0.77
SSBP3-204ENST00000371320 Q8N3U1 123 aa19.89■□□□□ 0.77
SSBP3-204ENST00000371320 TRACP01848 142 aa19.88■□□□□ 0.77
SSBP3-204ENST00000371320 MRPL23Q16540 153 aaKnown RBP19.88■□□□□ 0.77
SSBP3-204ENST00000371320 FLNBO75369 2602 aaKnown RBP19.88■□□□□ 0.77
SSBP3-204ENST00000371320 REG3AQ06141 175 aa19.87■□□□□ 0.77
SSBP3-204ENST00000371320 CHCHD10Q8WYQ3 142 aaPredicted RBP19.87■□□□□ 0.77
SSBP3-204ENST00000371320 FAM218AQ96MZ4 157 aa19.85■□□□□ 0.77
SSBP3-204ENST00000371320 IGLV10-54A0A075B6I4 117 aa19.85■□□□□ 0.77
SSBP3-204ENST00000371320 CKS1BP61024 79 aa19.85■□□□□ 0.77
SSBP3-204ENST00000371320 TRRAPQ9Y4A5 3859 aa19.85■□□□□ 0.77
SSBP3-204ENST00000371320 DEFB121Q5J5C9 76 aa19.83■□□□□ 0.77
SSBP3-204ENST00000371320 SMIM11BQ8TCY0 68 aa19.83■□□□□ 0.76
SSBP3-204ENST00000371320 MALP21145 153 aa19.81■□□□□ 0.76
SSBP3-204ENST00000371320 LELP1Q5T871 98 aa19.8■□□□□ 0.76
SSBP3-204ENST00000371320 CFAP161Q6P656 301 aa19.8■□□□□ 0.76
SSBP3-204ENST00000371320 KIAA0087Q14695 138 aa19.8■□□□□ 0.76
SSBP3-204ENST00000371320 BAALC-AS2P0C853 105 aa19.79■□□□□ 0.76
SSBP3-204ENST00000371320 CXCL5P42830 114 aa19.77■□□□□ 0.76
SSBP3-204ENST00000371320 OR13C6PQ8NH95 151 aa19.77■□□□□ 0.76
SSBP3-204ENST00000371320 F8P00451 2351 aa19.74■□□□□ 0.75
SSBP3-204ENST00000371320 OXLD1Q5BKU9 147 aa19.74■□□□□ 0.75
SSBP3-204ENST00000371320 H0YGX0 51 aa19.73■□□□□ 0.75
SSBP3-204ENST00000371320 SNCGO76070 127 aa19.73■□□□□ 0.75
SSBP3-204ENST00000371320 Q9HAA7 133 aa19.73■□□□□ 0.75
SSBP3-204ENST00000371320 FAM240AA0A1B0GVK7 77 aa19.72■□□□□ 0.75
SSBP3-204ENST00000371320 COX17Q14061 63 aa19.72■□□□□ 0.75
SSBP3-204ENST00000371320 A0A087WYN8 130 aa19.7■□□□□ 0.74
SSBP3-204ENST00000371320 KRTAP10-11P60412 298 aa19.69■□□□□ 0.74
SSBP3-204ENST00000371320 KLK12Q9UKR0 248 aa19.69■□□□□ 0.74
SSBP3-204ENST00000371320 A0A1B0GV72 72 aa19.68■□□□□ 0.74
SSBP3-204ENST00000371320 DNAL4O96015 105 aa19.68■□□□□ 0.74
SSBP3-204ENST00000371320 C15orf53Q8NAA6 179 aa19.68■□□□□ 0.74
SSBP3-204ENST00000371320 C22orf24Q9Y442 160 aa19.68■□□□□ 0.74
SSBP3-204ENST00000371320 CYSRT1A8MQ03 144 aa19.67■□□□□ 0.74
SSBP3-204ENST00000371320 LYPD5Q6UWN5 251 aa19.67■□□□□ 0.74
SSBP3-204ENST00000371320 PRR34Q9NV39 138 aa19.67■□□□□ 0.74
SSBP3-204ENST00000371320 C9orf116Q5BN46 136 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-204ENST00000371320 RETNQ9HD89 108 aa19.66■□□□□ 0.74
SSBP3-204ENST00000371320 KLK5Q9Y337 293 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-204ENST00000371320 NDUFC2O95298 119 aa19.63■□□□□ 0.73
SSBP3-204ENST00000371320 SPAG11BQ08648 103 aa19.63■□□□□ 0.73
SSBP3-204ENST00000371320 PRR3P79522 188 aaKnown RBP19.63■□□□□ 0.73
SSBP3-204ENST00000371320 GAGE2BQ13066 116 aa19.63■□□□□ 0.73
SSBP3-204ENST00000371320 GAGE2EQ4V326 116 aa19.63■□□□□ 0.73
SSBP3-204ENST00000371320 GAGE2DQ9UEU5 116 aa19.63■□□□□ 0.73
SSBP3-204ENST00000371320 ENHOQ6UWT2 76 aa19.61■□□□□ 0.73
SSBP3-204ENST00000371320 LECT2O14960 151 aa19.6■□□□□ 0.73
SSBP3-204ENST00000371320 ACYP1P07311 99 aa19.6■□□□□ 0.73
SSBP3-204ENST00000371320 C6orf223Q8N319 242 aa19.6■□□□□ 0.73
SSBP3-204ENST00000371320 TTC32Q5I0X7 151 aa19.6■□□□□ 0.73
SSBP3-204ENST00000371320 KRTAP24-1Q3LI83 254 aa19.59■□□□□ 0.73
SSBP3-204ENST00000371320 UNQ6190/PRO20217Q6UXQ8 127 aa19.59■□□□□ 0.73
SSBP3-204ENST00000371320 BAHCC1Q9P281 2608 aa19.59■□□□□ 0.73
SSBP3-204ENST00000371320 C10orf25Q5T742 122 aa19.58■□□□□ 0.72
SSBP3-204ENST00000371320 INAFM2P0DMQ5 153 aa19.57■□□□□ 0.72
SSBP3-204ENST00000371320 KPRPQ5T749 579 aaPredicted RBP19.57■□□□□ 0.72
SSBP3-204ENST00000371320 H3BNG1 76 aa19.56■□□□□ 0.72
SSBP3-204ENST00000371320 EGFEM1PQ0D2K5 195 aa19.56■□□□□ 0.72
SSBP3-204ENST00000371320 LINC00526Q96FQ7 95 aa19.56■□□□□ 0.72
SSBP3-204ENST00000371320 NANOS2P60321 138 aaKnown RBP19.56■□□□□ 0.72
SSBP3-204ENST00000371320 TMEM126AQ9H061 195 aa19.55■□□□□ 0.72
SSBP3-204ENST00000371320 Q6ZTC4 211 aa19.54■□□□□ 0.72
SSBP3-204ENST00000371320 C3orf56Q8N813 242 aa19.54■□□□□ 0.72
SSBP3-204ENST00000371320 Q6Q795 121 aa19.53■□□□□ 0.72
SSBP3-204ENST00000371320 A0A0J9YWU9 116 aa19.52■□□□□ 0.72
SSBP3-204ENST00000371320 MUC7Q8TAX7 377 aa19.52■□□□□ 0.71
SSBP3-204ENST00000371320 WFDC10BQ8IUB3 73 aa19.51■□□□□ 0.71
SSBP3-204ENST00000371320 Q8NDZ9 215 aa19.5■□□□□ 0.71
SSBP3-204ENST00000371320 NCR3O14931 201 aa19.5■□□□□ 0.71
SSBP3-204ENST00000371320 SLPIP03973 132 aa19.49■□□□□ 0.71
SSBP3-204ENST00000371320 ANAPC13Q9BS18 74 aa19.47■□□□□ 0.71
SSBP3-204ENST00000371320 GAGE2AQ6NT46 116 aa19.46■□□□□ 0.71
SSBP3-204ENST00000371320 ORMDL1Q9P0S3 153 aa19.46■□□□□ 0.71
SSBP3-204ENST00000371320 S100A7L2Q5SY68 101 aa19.45■□□□□ 0.7
SSBP3-204ENST00000371320 C9orf129Q5T035 196 aaKnown RBP19.45■□□□□ 0.7
SSBP3-204ENST00000371320 GVQW2A0A096LPI5 108 aaPredicted RBP19.44■□□□□ 0.7
SSBP3-204ENST00000371320 A0A1B0GX51 115 aa19.44■□□□□ 0.7
SSBP3-204ENST00000371320 OBSCN-AS1Q96MR7 158 aa19.43■□□□□ 0.7
SSBP3-204ENST00000371320 NDUFV3P56181 108 aaKnown RBP19.42■□□□□ 0.7
SSBP3-204ENST00000371320 SMCR5Q8TEV8 140 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms