RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
DEPDC1-201ENST00000370966 Q6JHZ5 121 aa8.43□□□□□ -1.06
DEPDC1-201ENST00000370966 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
DEPDC1-201ENST00000370966 LINC01561Q8N1V8 128 aa8.43□□□□□ -1.06
DEPDC1-201ENST00000370966 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
DEPDC1-201ENST00000370966 KLK9Q2XQG4 91 aa8.43□□□□□ -1.06
DEPDC1-201ENST00000370966 A0A096LNI7 61 aa8.42□□□□□ -1.06
DEPDC1-201ENST00000370966 A0A0J9YWU9 116 aa8.42□□□□□ -1.06
DEPDC1-201ENST00000370966 NANOS2P60321 138 aaKnown RBP8.42□□□□□ -1.06
DEPDC1-201ENST00000370966 CHKB-CPT1BH3BT56 60 aa8.42□□□□□ -1.06
DEPDC1-201ENST00000370966 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
DEPDC1-201ENST00000370966 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
DEPDC1-201ENST00000370966 Q8N814 137 aa8.41□□□□□ -1.06
DEPDC1-201ENST00000370966 C3orf84H3BNL1 204 aa8.41□□□□□ -1.06
DEPDC1-201ENST00000370966 COX7CP15954 63 aa8.41□□□□□ -1.06
DEPDC1-201ENST00000370966 NDUFC1O43677 76 aa8.41□□□□□ -1.06
DEPDC1-201ENST00000370966 PTPRBP23467 1997 aa8.4□□□□□ -1.06
DEPDC1-201ENST00000370966 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
DEPDC1-201ENST00000370966 MUC4Q99102 2169 aa8.4□□□□□ -1.06
DEPDC1-201ENST00000370966 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
DEPDC1-201ENST00000370966 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
DEPDC1-201ENST00000370966 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
DEPDC1-201ENST00000370966 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
DEPDC1-201ENST00000370966 F8WDY8 70 aa8.39□□□□□ -1.07
DEPDC1-201ENST00000370966 PCSK5Q92824 1860 aa8.38□□□□□ -1.07
DEPDC1-201ENST00000370966 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
DEPDC1-201ENST00000370966 PRB2P02812 416 aaPredicted RBP8.38□□□□□ -1.07
DEPDC1-201ENST00000370966 Q6ZTC4 211 aa8.37□□□□□ -1.07
DEPDC1-201ENST00000370966 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
DEPDC1-201ENST00000370966 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
DEPDC1-201ENST00000370966 FHL3Q13643 280 aa8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 A0A087WYN8 130 aa8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 NDUFC2-KCTD14E9PQ53 114 aa8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1-201ENST00000370966 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
DEPDC1-201ENST00000370966 RETNQ9HD89 108 aa8.35□□□□□ -1.07
DEPDC1-201ENST00000370966 LYPD5Q6UWN5 251 aa8.34□□□□□ -1.07
DEPDC1-201ENST00000370966 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
DEPDC1-201ENST00000370966 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
DEPDC1-201ENST00000370966 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.08
DEPDC1-201ENST00000370966 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
DEPDC1-201ENST00000370966 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
DEPDC1-201ENST00000370966 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
DEPDC1-201ENST00000370966 WFDC10BQ8IUB3 73 aa8.32□□□□□ -1.08
DEPDC1-201ENST00000370966 COL27A1Q8IZC6 1860 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1-201ENST00000370966 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
DEPDC1-201ENST00000370966 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
DEPDC1-201ENST00000370966 UTRNP46939 3433 aa8.31□□□□□ -1.08
DEPDC1-201ENST00000370966 TRAV7A0A075B6U4 112 aa8.3□□□□□ -1.08
DEPDC1-201ENST00000370966 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
DEPDC1-201ENST00000370966 PLAC8L1A1L4L8 177 aa8.3□□□□□ -1.08
DEPDC1-201ENST00000370966 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
DEPDC1-201ENST00000370966 FSHBP01225 129 aa8.29□□□□□ -1.08
DEPDC1-201ENST00000370966 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
DEPDC1-201ENST00000370966 NUPR2A6NF83 97 aa8.29□□□□□ -1.08
DEPDC1-201ENST00000370966 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
DEPDC1-201ENST00000370966 M0R2N4 97 aa8.28□□□□□ -1.08
DEPDC1-201ENST00000370966 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
DEPDC1-201ENST00000370966 REG3GQ6UW15 175 aa8.27□□□□□ -1.09
DEPDC1-201ENST00000370966 A0A087WVE0 104 aa8.26□□□□□ -1.09
DEPDC1-201ENST00000370966 PRYO14603 147 aa8.26□□□□□ -1.09
DEPDC1-201ENST00000370966 Q6ZRU5 148 aa8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 Q9UF83 564 aa8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 PCNTO95613 3336 aa8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 C10orf25Q5T742 122 aa8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 F8P00451 2351 aa8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 PRO0461Q9UI25 63 aa8.25□□□□□ -1.09
DEPDC1-201ENST00000370966 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
DEPDC1-201ENST00000370966 SMCPP49901 116 aaPredicted RBP8.24□□□□□ -1.09
DEPDC1-201ENST00000370966 SEC61GP60059 68 aa8.24□□□□□ -1.09
DEPDC1-201ENST00000370966 Q8N3U1 123 aa8.24□□□□□ -1.09
DEPDC1-201ENST00000370966 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
DEPDC1-201ENST00000370966 CHD7Q9P2D1 2997 aa8.23□□□□□ -1.09
DEPDC1-201ENST00000370966 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
DEPDC1-201ENST00000370966 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
DEPDC1-201ENST00000370966 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
DEPDC1-201ENST00000370966 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
DEPDC1-201ENST00000370966 X6R8D5 127 aa8.23□□□□□ -1.09
DEPDC1-201ENST00000370966 H3BNG1 76 aa8.22□□□□□ -1.09
DEPDC1-201ENST00000370966 SPTSSBQ8NFR3 76 aa8.22□□□□□ -1.09
DEPDC1-201ENST00000370966 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
DEPDC1-201ENST00000370966 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
DEPDC1-201ENST00000370966 Q6ZVQ6 151 aa8.22□□□□□ -1.09
DEPDC1-201ENST00000370966 LY6G6CO95867 125 aa8.21□□□□□ -1.1
DEPDC1-201ENST00000370966 SOSTDC1Q6X4U4 206 aa8.21□□□□□ -1.1
DEPDC1-201ENST00000370966 A8MTW9 85 aa8.2□□□□□ -1.1
DEPDC1-201ENST00000370966 SBSPONQ8IVN8 264 aa8.2□□□□□ -1.1
DEPDC1-201ENST00000370966 Q8N9L7 120 aa8.19□□□□□ -1.1
DEPDC1-201ENST00000370966 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
DEPDC1-201ENST00000370966 ESRGQ1W209 222 aa8.17□□□□□ -1.1
DEPDC1-201ENST00000370966 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1-201ENST00000370966 CXCL6P80162 114 aa8.17□□□□□ -1.1
DEPDC1-201ENST00000370966 Q9BRP9 147 aa8.17□□□□□ -1.1
DEPDC1-201ENST00000370966 PRO0628Q9UI54 55 aa8.16□□□□□ -1.1
DEPDC1-201ENST00000370966 C6orf48Q9UBA6 75 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms