RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 H7C423 109 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 J3KRW8 73 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 IGKV3-20P01619 116 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 UBR4Q5T4S7 5183 aa10.44□□□□□ -0.74
LMO4-201ENST00000370542 IGHV3-16A0A0C4DH30 117 aa10.44□□□□□ -0.74
LMO4-201ENST00000370542 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
LMO4-201ENST00000370542 H7C2G1 150 aa10.44□□□□□ -0.74
LMO4-201ENST00000370542 IGHV3-30-3P0DP02 117 aa10.44□□□□□ -0.74
LMO4-201ENST00000370542 CIRBPQ14011 172 aaKnown RBP10.44□□□□□ -0.74
LMO4-201ENST00000370542 ZNF56Q15929 161 aa10.44□□□□□ -0.74
LMO4-201ENST00000370542 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
LMO4-201ENST00000370542 CXCL5P42830 114 aa10.43□□□□□ -0.74
LMO4-201ENST00000370542 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
LMO4-201ENST00000370542 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
LMO4-201ENST00000370542 LITAFQ99732 161 aa10.43□□□□□ -0.74
LMO4-201ENST00000370542 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
LMO4-201ENST00000370542 HSPG2P98160 4391 aa10.42□□□□□ -0.74
LMO4-201ENST00000370542 IGHV3OR16-12A0A075B7B8 117 aa10.41□□□□□ -0.74
LMO4-201ENST00000370542 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
LMO4-201ENST00000370542 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
LMO4-201ENST00000370542 RTL8CO15255 209 aa10.41□□□□□ -0.74
LMO4-201ENST00000370542 Q6ZR54 194 aa10.41□□□□□ -0.74
LMO4-201ENST00000370542 A0A087WWL8 130 aa10.4□□□□□ -0.74
LMO4-201ENST00000370542 PRSS2P07478 247 aa10.4□□□□□ -0.74
LMO4-201ENST00000370542 VSIG2Q96IQ7 327 aa10.4□□□□□ -0.74
LMO4-201ENST00000370542 TIRAPP58753 221 aa10.39□□□□□ -0.75
LMO4-201ENST00000370542 HERV-K104P63124 156 aa10.39□□□□□ -0.75
LMO4-201ENST00000370542 SMIM20Q8N5G0 67 aa10.39□□□□□ -0.75
LMO4-201ENST00000370542 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
LMO4-201ENST00000370542 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
LMO4-201ENST00000370542 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
LMO4-201ENST00000370542 TRACP01848 142 aa10.38□□□□□ -0.75
LMO4-201ENST00000370542 INAFM2P0DMQ5 153 aa10.38□□□□□ -0.75
LMO4-201ENST00000370542 NACAE9PAV3 2078 aa10.38□□□□□ -0.75
LMO4-201ENST00000370542 TRAV12-3A0A0B4J271 114 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 LYRM9A8MSI8 78 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 COX7A2LO14548 114 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 UQCRQO14949 82 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 NDUFA1O15239 70 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 DAND5Q8N907 189 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 SPXQ9BT56 116 aa10.37□□□□□ -0.75
LMO4-201ENST00000370542 INSP01308 110 aa10.36□□□□□ -0.75
LMO4-201ENST00000370542 DAD1P61803 113 aa10.36□□□□□ -0.75
LMO4-201ENST00000370542 SPINK13Q1W4C9 94 aa10.36□□□□□ -0.75
LMO4-201ENST00000370542 C3orf22Q8N5N4 141 aa10.36□□□□□ -0.75
LMO4-201ENST00000370542 JPT2Q9H910 190 aa10.36□□□□□ -0.75
LMO4-201ENST00000370542 LRP1BQ9NZR2 4599 aa10.36□□□□□ -0.75
LMO4-201ENST00000370542 PRM2P04554 102 aa10.35□□□□□ -0.75
LMO4-201ENST00000370542 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
LMO4-201ENST00000370542 LINC01587Q99440 93 aa10.35□□□□□ -0.75
LMO4-201ENST00000370542 IGLV5-45A0A087WSX0 123 aa10.34□□□□□ -0.75
LMO4-201ENST00000370542 A0A1B0GX51 115 aa10.34□□□□□ -0.75
LMO4-201ENST00000370542 M0R2N4 97 aa10.34□□□□□ -0.75
LMO4-201ENST00000370542 SDIM1Q6ZPB5 146 aa10.34□□□□□ -0.75
LMO4-201ENST00000370542 IGHV3-64A0A075B6Q5 118 aa10.33□□□□□ -0.76
LMO4-201ENST00000370542 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
LMO4-201ENST00000370542 TRAV12-2A0A075B6T6 113 aa10.32□□□□□ -0.76
LMO4-201ENST00000370542 HTN3P15516 51 aa10.32□□□□□ -0.76
LMO4-201ENST00000370542 C9orf153Q5TBE3 101 aa10.32□□□□□ -0.76
LMO4-201ENST00000370542 UBE2DNLQ8IWF7 75 aa10.32□□□□□ -0.76
LMO4-201ENST00000370542 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
LMO4-201ENST00000370542 RPS28P62857 69 aaKnown RBP10.31□□□□□ -0.76
LMO4-201ENST00000370542 HERVK_113P63121 156 aa10.31□□□□□ -0.76
LMO4-201ENST00000370542 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
LMO4-201ENST00000370542 TRAV8-3A0A0A6YYJ7 113 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 ATOX1O00244 68 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 CLEC2BQ92478 149 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
LMO4-201ENST00000370542 C5orf38Q86SI9 138 aa10.29□□□□□ -0.76
LMO4-201ENST00000370542 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
LMO4-201ENST00000370542 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
LMO4-201ENST00000370542 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
LMO4-201ENST00000370542 LINC00308Q8TCZ7 52 aa10.28□□□□□ -0.76
LMO4-201ENST00000370542 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.76
LMO4-201ENST00000370542 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
LMO4-201ENST00000370542 J3KT08 172 aa10.27□□□□□ -0.77
LMO4-201ENST00000370542 COX7CP15954 63 aa10.27□□□□□ -0.77
LMO4-201ENST00000370542 C1orf134Q5TEV5 83 aa10.27□□□□□ -0.77
LMO4-201ENST00000370542 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
LMO4-201ENST00000370542 CRYGAP11844 174 aa10.26□□□□□ -0.77
LMO4-201ENST00000370542 CHCHD7Q9BUK0 85 aa10.26□□□□□ -0.77
LMO4-201ENST00000370542 DNAH5Q8TE73 4624 aa10.26□□□□□ -0.77
LMO4-201ENST00000370542 APOBP04114 4563 aaKnown RBP10.26□□□□□ -0.77
LMO4-201ENST00000370542 F5H768 121 aa10.25□□□□□ -0.77
LMO4-201ENST00000370542 FAM104AQ969W3 186 aa10.25□□□□□ -0.77
LMO4-201ENST00000370542 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
LMO4-201ENST00000370542 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
LMO4-201ENST00000370542 DGAT2L7PQ6IED9 249 aa10.24□□□□□ -0.77
LMO4-201ENST00000370542 NOP10Q9NPE3 64 aaKnown RBP10.24□□□□□ -0.77
LMO4-201ENST00000370542 LINC00588Q9Y4M8 146 aa10.24□□□□□ -0.77
LMO4-201ENST00000370542 CSDC2Q9Y534 153 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms