RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SORL1Q92673 2214 aa12.95□□□□□ -0.34
SNX27-202ENST00000368841 C1orf195Q5TG92 126 aa12.94□□□□□ -0.34
SNX27-202ENST00000368841 Q6JHZ5 121 aa12.94□□□□□ -0.34
SNX27-202ENST00000368841 H0Y9P7 68 aa12.93□□□□□ -0.34
SNX27-202ENST00000368841 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
SNX27-202ENST00000368841 EGFEM1PQ0D2K5 195 aa12.92□□□□□ -0.34
SNX27-202ENST00000368841 URB1-AS1Q96HZ7 61 aa12.92□□□□□ -0.34
SNX27-202ENST00000368841 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
SNX27-202ENST00000368841 IGLV1-51P01701 117 aa12.91□□□□□ -0.34
SNX27-202ENST00000368841 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
SNX27-202ENST00000368841 HCG22E2RYF7 251 aa12.9□□□□□ -0.34
SNX27-202ENST00000368841 LYPD5Q6UWN5 251 aa12.9□□□□□ -0.34
SNX27-202ENST00000368841 Q6ZRU5 148 aa12.9□□□□□ -0.34
SNX27-202ENST00000368841 IGKV2D-30A0A075B6S6 120 aa12.89□□□□□ -0.35
SNX27-202ENST00000368841 IGKV2-30P06310 120 aa12.89□□□□□ -0.35
SNX27-202ENST00000368841 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
SNX27-202ENST00000368841 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
SNX27-202ENST00000368841 PMAIP1Q13794 54 aa12.89□□□□□ -0.35
SNX27-202ENST00000368841 ADAMTS20P59510 1910 aa12.89□□□□□ -0.35
SNX27-202ENST00000368841 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
SNX27-202ENST00000368841 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
SNX27-202ENST00000368841 Q8N3U1 123 aa12.86□□□□□ -0.35
SNX27-202ENST00000368841 TRAV7A0A075B6U4 112 aa12.86□□□□□ -0.35
SNX27-202ENST00000368841 LRP4O75096 1905 aa12.86□□□□□ -0.35
SNX27-202ENST00000368841 AGRNO00468 2067 aa12.86□□□□□ -0.35
SNX27-202ENST00000368841 IMUPQ9GZP8 106 aa12.85□□□□□ -0.35
SNX27-202ENST00000368841 FSHBP01225 129 aa12.85□□□□□ -0.35
SNX27-202ENST00000368841 C7orf65Q6ZTY9 151 aa12.85□□□□□ -0.35
SNX27-202ENST00000368841 SPACA4Q8TDM5 124 aa12.84□□□□□ -0.35
SNX27-202ENST00000368841 TRBV7-7A0A0K0K1E9 115 aa12.84□□□□□ -0.35
SNX27-202ENST00000368841 LINC00310P59036 64 aa12.84□□□□□ -0.35
SNX27-202ENST00000368841 CHTF8P0CG12 524 aa12.83□□□□□ -0.36
SNX27-202ENST00000368841 PLA2G1BP04054 148 aaKnown RBP12.81□□□□□ -0.36
SNX27-202ENST00000368841 SMCR5Q8TEV8 140 aa12.8□□□□□ -0.36
SNX27-202ENST00000368841 C22orf24Q9Y442 160 aa12.8□□□□□ -0.36
SNX27-202ENST00000368841 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
SNX27-202ENST00000368841 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
SNX27-202ENST00000368841 MDFIQ99750 246 aa12.78□□□□□ -0.36
SNX27-202ENST00000368841 LINC00337Q8N6G1 96 aa12.78□□□□□ -0.36
SNX27-202ENST00000368841 C16orf95Q9H693 158 aa12.77□□□□□ -0.37
SNX27-202ENST00000368841 SMIM26A0A096LP01 95 aa12.76□□□□□ -0.37
SNX27-202ENST00000368841 MOBPQ13875 183 aa12.76□□□□□ -0.37
SNX27-202ENST00000368841 SMIM29Q86T20 159 aa12.76□□□□□ -0.37
SNX27-202ENST00000368841 KIAA0087Q14695 138 aa12.75□□□□□ -0.37
SNX27-202ENST00000368841 AMELXQ99217 191 aa12.75□□□□□ -0.37
SNX27-202ENST00000368841 FHL3Q13643 280 aa12.75□□□□□ -0.37
SNX27-202ENST00000368841 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
SNX27-202ENST00000368841 LINC00846Q9NV44 126 aa12.72□□□□□ -0.37
SNX27-202ENST00000368841 IGLV8-61A0A075B6I0 122 aa12.72□□□□□ -0.37
SNX27-202ENST00000368841 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.37
SNX27-202ENST00000368841 C1orf64Q8NEQ6 169 aa12.71□□□□□ -0.37
SNX27-202ENST00000368841 CSPG4Q6UVK1 2322 aa12.7□□□□□ -0.38
SNX27-202ENST00000368841 PHF5AQ7RTV0 110 aaKnown RBP12.69□□□□□ -0.38
SNX27-202ENST00000368841 A0A096LNJ9 63 aa12.68□□□□□ -0.38
SNX27-202ENST00000368841 LIMD2Q9BT23 127 aa12.68□□□□□ -0.38
SNX27-202ENST00000368841 MUC7Q8TAX7 377 aa12.68□□□□□ -0.38
SNX27-202ENST00000368841 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
SNX27-202ENST00000368841 SPG11Q96JI7 2443 aa12.64□□□□□ -0.39
SNX27-202ENST00000368841 TMEM254Q8TBM7 123 aa12.64□□□□□ -0.39
SNX27-202ENST00000368841 A0A1B0GUV1 79 aa12.63□□□□□ -0.39
SNX27-202ENST00000368841 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
SNX27-202ENST00000368841 BDP1A6H8Y1 2624 aa12.62□□□□□ -0.39
SNX27-202ENST00000368841 MUC4Q99102 2169 aa12.62□□□□□ -0.39
SNX27-202ENST00000368841 LINC00167Q96N53 147 aa12.61□□□□□ -0.39
SNX27-202ENST00000368841 SPAG11AQ6PDA7 123 aa12.59□□□□□ -0.39
SNX27-202ENST00000368841 SPATA3Q8NHX4 192 aa12.59□□□□□ -0.39
SNX27-202ENST00000368841 C6orf48Q9UBA6 75 aa12.59□□□□□ -0.39
SNX27-202ENST00000368841 A0A1B0GU69 56 aa12.59□□□□□ -0.39
SNX27-202ENST00000368841 hDV103S1A0JD37 113 aa12.58□□□□□ -0.4
SNX27-202ENST00000368841 ST20-AS1Q8NBB2 130 aa12.56□□□□□ -0.4
SNX27-202ENST00000368841 C11orf72Q8NBR9 251 aa12.56□□□□□ -0.4
SNX27-202ENST00000368841 Q8N2B8 174 aa12.56□□□□□ -0.4
SNX27-202ENST00000368841 RTL8CO15255 209 aa12.55□□□□□ -0.4
SNX27-202ENST00000368841 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
SNX27-202ENST00000368841 COL27A1Q8IZC6 1860 aaPredicted RBP12.55□□□□□ -0.4
SNX27-202ENST00000368841 LINC00315P59091 139 aa12.54□□□□□ -0.4
SNX27-202ENST00000368841 ANKHD1Q8IWZ3 2542 aaKnown RBP12.54□□□□□ -0.4
SNX27-202ENST00000368841 FAM218AQ96MZ4 157 aa12.53□□□□□ -0.4
SNX27-202ENST00000368841 NHLRC4P0CG21 123 aaPredicted RBP12.51□□□□□ -0.41
SNX27-202ENST00000368841 SERTAD4-AS1Q5TG53 156 aa12.51□□□□□ -0.41
SNX27-202ENST00000368841 TYMSOSQ8TAI1 123 aa12.51□□□□□ -0.41
SNX27-202ENST00000368841 C16orf90A8MZG2 172 aa12.51□□□□□ -0.41
SNX27-202ENST00000368841 NAV3Q8IVL0 2385 aa12.51□□□□□ -0.41
SNX27-202ENST00000368841 Q96NJ1 140 aa12.5□□□□□ -0.41
SNX27-202ENST00000368841 FAM168BA1KXE4 195 aa12.5□□□□□ -0.41
SNX27-202ENST00000368841 F8WDY8 70 aa12.5□□□□□ -0.41
SNX27-202ENST00000368841 EPM2AB3EWF7 344 aa12.47□□□□□ -0.41
SNX27-202ENST00000368841 FAM229AH3BQW9 127 aa12.47□□□□□ -0.41
SNX27-202ENST00000368841 LINC00313P59037 77 aa12.47□□□□□ -0.41
SNX27-202ENST00000368841 LINC00476Q8WZB0 136 aa12.47□□□□□ -0.41
SNX27-202ENST00000368841 CXCL6P80162 114 aa12.46□□□□□ -0.41
SNX27-202ENST00000368841 PTPRBP23467 1997 aa12.46□□□□□ -0.41
SNX27-202ENST00000368841 GOLGB1Q14789 3259 aaKnown RBP12.46□□□□□ -0.41
SNX27-202ENST00000368841 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.42
SNX27-202ENST00000368841 C4orf26Q17RF5 130 aa12.45□□□□□ -0.42
SNX27-202ENST00000368841 KRTAP24-1Q3LI83 254 aa12.45□□□□□ -0.42
SNX27-202ENST00000368841 CDIP1Q9H305 208 aa12.44□□□□□ -0.42
SNX27-202ENST00000368841 ACYP2P14621 99 aa12.44□□□□□ -0.42
SNX27-202ENST00000368841 NOTCH2Q04721 2471 aa12.43□□□□□ -0.42
SNX27-202ENST00000368841 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms