RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
NEK2-201ENST00000366998 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
NEK2-201ENST00000366998 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
NEK2-201ENST00000366998 CKS1BP61024 79 aa10.11□□□□□ -0.79
NEK2-201ENST00000366998 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
NEK2-201ENST00000366998 CCL18P55774 89 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 LINC00158P58513 81 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 C2orf82Q6UX34 121 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 PRO1854Q9UHT4 67 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 GAGE10A6NGK3 116 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
NEK2-201ENST00000366998 TSPAN13O95857 204 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
NEK2-201ENST00000366998 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
NEK2-201ENST00000366998 DNAH10OSP0CZ25 163 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 PFN2P35080 140 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 KIAA0087Q14695 138 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 GTF2H5Q6ZYL4 71 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 MIR7-3HGQ8N6C7 128 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 STAB2Q8WWQ8 2551 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 K7EP34 96 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 CXCL5P42830 114 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 ERG28Q9UKR5 140 aa10.08□□□□□ -0.8
NEK2-201ENST00000366998 H7C2G1 150 aa10.07□□□□□ -0.8
NEK2-201ENST00000366998 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
NEK2-201ENST00000366998 C1orf43Q9BWL3 253 aa10.06□□□□□ -0.8
NEK2-201ENST00000366998 DNHD1Q96M86 4753 aa10.06□□□□□ -0.8
NEK2-201ENST00000366998 Q1RN00 199 aa10.06□□□□□ -0.8
NEK2-201ENST00000366998 IGKV2D-24A0A075B6R9 120 aa10.05□□□□□ -0.8
NEK2-201ENST00000366998 LOC107984156A0A0G2JMH3 177 aa10.05□□□□□ -0.8
NEK2-201ENST00000366998 ARL17AQ8IVW1 177 aa10.05□□□□□ -0.8
NEK2-201ENST00000366998 Q9HAA7 133 aa10.05□□□□□ -0.8
NEK2-201ENST00000366998 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
NEK2-201ENST00000366998 KRTAP26-1Q6PEX3 210 aa10.04□□□□□ -0.8
NEK2-201ENST00000366998 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
NEK2-201ENST00000366998 PSMB2P49721 201 aa10.02□□□□□ -0.8
NEK2-201ENST00000366998 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
NEK2-201ENST00000366998 UPK3BQ9BT76 320 aa10.02□□□□□ -0.81
NEK2-201ENST00000366998 KRTAP21-3Q3LHN1 58 aa10.01□□□□□ -0.81
NEK2-201ENST00000366998 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
NEK2-201ENST00000366998 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
NEK2-201ENST00000366998 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
NEK2-201ENST00000366998 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
NEK2-201ENST00000366998 SCGB1C2P0DMR2 95 aa10□□□□□ -0.81
NEK2-201ENST00000366998 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
NEK2-201ENST00000366998 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
NEK2-201ENST00000366998 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
NEK2-201ENST00000366998 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
NEK2-201ENST00000366998 C10orf25Q5T742 122 aa10□□□□□ -0.81
NEK2-201ENST00000366998 APLNQ9ULZ1 77 aa10□□□□□ -0.81
NEK2-201ENST00000366998 COX17Q14061 63 aa9.99□□□□□ -0.81
NEK2-201ENST00000366998 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
NEK2-201ENST00000366998 MEGF8Q7Z7M0 2845 aa9.98□□□□□ -0.81
NEK2-201ENST00000366998 NUPR2A6NF83 97 aa9.98□□□□□ -0.81
NEK2-201ENST00000366998 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
NEK2-201ENST00000366998 NTN5Q8WTR8 489 aaPredicted RBP9.98□□□□□ -0.81
NEK2-201ENST00000366998 DYNC2H1Q8NCM8 4307 aaKnown RBP9.97□□□□□ -0.81
NEK2-201ENST00000366998 H3BMG7 143 aa9.97□□□□□ -0.81
NEK2-201ENST00000366998 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.81
NEK2-201ENST00000366998 TRIAP1O43715 76 aa9.96□□□□□ -0.82
NEK2-201ENST00000366998 RMI2Q96E14 147 aa9.96□□□□□ -0.82
NEK2-201ENST00000366998 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
NEK2-201ENST00000366998 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
NEK2-201ENST00000366998 TCL1BO95988 128 aa9.94□□□□□ -0.82
NEK2-201ENST00000366998 C6orf48Q9UBA6 75 aa9.94□□□□□ -0.82
NEK2-201ENST00000366998 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
NEK2-201ENST00000366998 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
NEK2-201ENST00000366998 TRBV20-1A0A075B6N2 111 aa9.93□□□□□ -0.82
NEK2-201ENST00000366998 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
NEK2-201ENST00000366998 LINC00337Q8N6G1 96 aa9.93□□□□□ -0.82
NEK2-201ENST00000366998 COX6CP09669 75 aa9.92□□□□□ -0.82
NEK2-201ENST00000366998 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
NEK2-201ENST00000366998 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
NEK2-201ENST00000366998 Q6ZRU5 148 aa9.91□□□□□ -0.82
NEK2-201ENST00000366998 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
NEK2-201ENST00000366998 CASC10Q5T4H9 136 aa9.9□□□□□ -0.82
NEK2-201ENST00000366998 OR13C6PQ8NH95 151 aa9.9□□□□□ -0.82
NEK2-201ENST00000366998 DNAH1Q9P2D7 4330 aa9.9□□□□□ -0.82
NEK2-201ENST00000366998 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.83
NEK2-201ENST00000366998 DNAH7Q8WXX0 4024 aa9.9□□□□□ -0.83
NEK2-201ENST00000366998 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
NEK2-201ENST00000366998 KRTAP1-5Q9BYS1 174 aa9.89□□□□□ -0.83
NEK2-201ENST00000366998 LYSTQ99698 3801 aa9.88□□□□□ -0.83
NEK2-201ENST00000366998 F8W1H4 67 aa9.88□□□□□ -0.83
NEK2-201ENST00000366998 F8WDY8 70 aa9.88□□□□□ -0.83
NEK2-201ENST00000366998 ATXN8Q156A1 80 aa9.88□□□□□ -0.83
NEK2-201ENST00000366998 NDUFC2O95298 119 aa9.87□□□□□ -0.83
NEK2-201ENST00000366998 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
NEK2-201ENST00000366998 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
NEK2-201ENST00000366998 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
NEK2-201ENST00000366998 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
NEK2-201ENST00000366998 NCR3O14931 201 aa9.86□□□□□ -0.83
NEK2-201ENST00000366998 LECT2O14960 151 aa9.86□□□□□ -0.83
NEK2-201ENST00000366998 WFDC2Q14508 124 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms