RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
CCDC7-203ENST00000362006 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
CCDC7-203ENST00000362006 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
CCDC7-203ENST00000362006 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
CCDC7-203ENST00000362006 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
CCDC7-203ENST00000362006 ALMS1Q8TCU4 4167 aa11.91□□□□□ -0.5
CCDC7-203ENST00000362006 TIMM17BO60830 172 aa11.91□□□□□ -0.5
CCDC7-203ENST00000362006 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.5
CCDC7-203ENST00000362006 Q6ZRN7 208 aaPredicted RBP11.9□□□□□ -0.5
CCDC7-203ENST00000362006 TMEM238C9JI98 176 aa11.89□□□□□ -0.51
CCDC7-203ENST00000362006 C14orf177Q52M58 125 aa11.89□□□□□ -0.51
CCDC7-203ENST00000362006 C2orf82Q6UX34 121 aa11.89□□□□□ -0.51
CCDC7-203ENST00000362006 C1orf134Q5TEV5 83 aa11.89□□□□□ -0.51
CCDC7-203ENST00000362006 MEIG1Q5JSS6 88 aa11.88□□□□□ -0.51
CCDC7-203ENST00000362006 CAMK2N2Q96S95 79 aa11.88□□□□□ -0.51
CCDC7-203ENST00000362006 SPANXB1Q9NS25 103 aaPredicted RBP11.88□□□□□ -0.51
CCDC7-203ENST00000362006 TAL2Q16559 108 aa11.87□□□□□ -0.51
CCDC7-203ENST00000362006 Q6ZVH6 145 aa11.86□□□□□ -0.51
CCDC7-203ENST00000362006 LINC00526Q96FQ7 95 aa11.86□□□□□ -0.51
CCDC7-203ENST00000362006 TRBV30A0A0K0K1B3 111 aa11.86□□□□□ -0.51
CCDC7-203ENST00000362006 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC7-203ENST00000362006 COX17Q14061 63 aa11.86□□□□□ -0.51
CCDC7-203ENST00000362006 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
CCDC7-203ENST00000362006 DNAH6Q9C0G6 4158 aa11.86□□□□□ -0.51
CCDC7-203ENST00000362006 HSD52Q0P140 79 aa11.85□□□□□ -0.51
CCDC7-203ENST00000362006 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
CCDC7-203ENST00000362006 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
CCDC7-203ENST00000362006 LCE6AA0A183 80 aa11.84□□□□□ -0.51
CCDC7-203ENST00000362006 SYCNQ0VAF6 134 aa11.84□□□□□ -0.51
CCDC7-203ENST00000362006 LITAFQ99732 161 aa11.84□□□□□ -0.51
CCDC7-203ENST00000362006 SPANXDQ9BXN6 97 aa11.84□□□□□ -0.51
CCDC7-203ENST00000362006 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
CCDC7-203ENST00000362006 LECT2O14960 151 aa11.83□□□□□ -0.52
CCDC7-203ENST00000362006 LRCOL1A6NCL2 159 aa11.83□□□□□ -0.52
CCDC7-203ENST00000362006 SMIM13P0DJ93 91 aa11.83□□□□□ -0.52
CCDC7-203ENST00000362006 C10orf25Q5T742 122 aa11.83□□□□□ -0.52
CCDC7-203ENST00000362006 GCSHP23434 173 aa11.82□□□□□ -0.52
CCDC7-203ENST00000362006 LINC00158P58513 81 aa11.82□□□□□ -0.52
CCDC7-203ENST00000362006 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
CCDC7-203ENST00000362006 Q6ZRU5 148 aa11.81□□□□□ -0.52
CCDC7-203ENST00000362006 COPS9Q8WXC6 57 aa11.81□□□□□ -0.52
CCDC7-203ENST00000362006 M0R143 59 aa11.81□□□□□ -0.52
CCDC7-203ENST00000362006 WFDC2Q14508 124 aa11.81□□□□□ -0.52
CCDC7-203ENST00000362006 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
CCDC7-203ENST00000362006 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
CCDC7-203ENST00000362006 IFITM1P13164 125 aa11.8□□□□□ -0.52
CCDC7-203ENST00000362006 PFN2P35080 140 aa11.8□□□□□ -0.52
CCDC7-203ENST00000362006 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
CCDC7-203ENST00000362006 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
CCDC7-203ENST00000362006 CEND1Q8N111 149 aa11.79□□□□□ -0.52
CCDC7-203ENST00000362006 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
CCDC7-203ENST00000362006 A0A0U1RRA0 63 aa11.78□□□□□ -0.52
CCDC7-203ENST00000362006 CNBPP62633 177 aaKnown RBP11.78□□□□□ -0.52
CCDC7-203ENST00000362006 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
CCDC7-203ENST00000362006 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.52
CCDC7-203ENST00000362006 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.52
CCDC7-203ENST00000362006 A0A087WTM6 91 aa11.77□□□□□ -0.53
CCDC7-203ENST00000362006 SLPIP03973 132 aa11.77□□□□□ -0.53
CCDC7-203ENST00000362006 HINT1P49773 126 aaPredicted RBP11.76□□□□□ -0.53
CCDC7-203ENST00000362006 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
CCDC7-203ENST00000362006 RPL24P83731 157 aaKnown RBP11.75□□□□□ -0.53
CCDC7-203ENST00000362006 BVES-AS1Q5T3Y7 98 aa11.75□□□□□ -0.53
CCDC7-203ENST00000362006 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
CCDC7-203ENST00000362006 DAND5Q8N907 189 aa11.75□□□□□ -0.53
CCDC7-203ENST00000362006 Q8N814 137 aa11.75□□□□□ -0.53
CCDC7-203ENST00000362006 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
CCDC7-203ENST00000362006 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
CCDC7-203ENST00000362006 A6NJY4 79 aa11.74□□□□□ -0.53
CCDC7-203ENST00000362006 EREGO14944 169 aa11.74□□□□□ -0.53
CCDC7-203ENST00000362006 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
CCDC7-203ENST00000362006 TLX1NBP0CAT3 122 aa11.74□□□□□ -0.53
CCDC7-203ENST00000362006 LOC107984156A0A0G2JMH3 177 aa11.72□□□□□ -0.53
CCDC7-203ENST00000362006 ARL17AQ8IVW1 177 aa11.72□□□□□ -0.53
CCDC7-203ENST00000362006 PKIGQ9Y2B9 76 aa11.72□□□□□ -0.53
CCDC7-203ENST00000362006 DNAH10Q8IVF4 4471 aa11.71□□□□□ -0.53
CCDC7-203ENST00000362006 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.54
CCDC7-203ENST00000362006 RTL8CO15255 209 aa11.71□□□□□ -0.54
CCDC7-203ENST00000362006 FXYD2P54710 66 aa11.71□□□□□ -0.54
CCDC7-203ENST00000362006 NPC2P61916 151 aa11.71□□□□□ -0.54
CCDC7-203ENST00000362006 SND1-IT1Q9HBX3 110 aa11.71□□□□□ -0.54
CCDC7-203ENST00000362006 SNHG12Q9BXW3 62 aa11.7□□□□□ -0.54
CCDC7-203ENST00000362006 LOC107984640A0A0U1RRK4 108 aa11.69□□□□□ -0.54
CCDC7-203ENST00000362006 A6NDN8 102 aa11.69□□□□□ -0.54
CCDC7-203ENST00000362006 BATFQ16520 125 aa11.69□□□□□ -0.54
CCDC7-203ENST00000362006 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
CCDC7-203ENST00000362006 A4D1N5 150 aa11.68□□□□□ -0.54
CCDC7-203ENST00000362006 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
CCDC7-203ENST00000362006 TNP2Q05952 138 aa11.67□□□□□ -0.54
CCDC7-203ENST00000362006 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
CCDC7-203ENST00000362006 Q6ZRP5 223 aa11.66□□□□□ -0.54
CCDC7-203ENST00000362006 DNAH2Q9P225 4427 aa11.66□□□□□ -0.54
CCDC7-203ENST00000362006 RPL18AQ02543 176 aaKnown RBP11.66□□□□□ -0.54
CCDC7-203ENST00000362006 NDUFC2O95298 119 aa11.65□□□□□ -0.55
CCDC7-203ENST00000362006 GAGE2EQ4V326 116 aa11.65□□□□□ -0.55
CCDC7-203ENST00000362006 NHP2Q9NX24 153 aaKnown RBP11.65□□□□□ -0.55
CCDC7-203ENST00000362006 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.55
CCDC7-203ENST00000362006 SACSQ9NZJ4 4579 aa11.64□□□□□ -0.55
CCDC7-203ENST00000362006 A0A1B0GWB2 263 aa11.63□□□□□ -0.55
CCDC7-203ENST00000362006 LBHQ53QV2 105 aaPredicted RBP11.63□□□□□ -0.55
CCDC7-203ENST00000362006 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms