RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SMCPP49901 116 aaPredicted RBP12.56□□□□□ -0.4
PDLIM7-203ENST00000359895 RETNQ9HD89 108 aa12.56□□□□□ -0.4
PDLIM7-203ENST00000359895 M0QXV9 152 aa12.55□□□□□ -0.4
PDLIM7-203ENST00000359895 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
PDLIM7-203ENST00000359895 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-203ENST00000359895 COX7A2LO14548 114 aa12.54□□□□□ -0.4
PDLIM7-203ENST00000359895 LINC00158P58513 81 aa12.54□□□□□ -0.4
PDLIM7-203ENST00000359895 NBEAL2Q6ZNJ1 2754 aa12.53□□□□□ -0.4
PDLIM7-203ENST00000359895 FBN3Q75N90 2809 aa12.53□□□□□ -0.4
PDLIM7-203ENST00000359895 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.41
PDLIM7-203ENST00000359895 CXCL5P42830 114 aa12.52□□□□□ -0.41
PDLIM7-203ENST00000359895 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
PDLIM7-203ENST00000359895 C9JAW5 83 aa12.51□□□□□ -0.41
PDLIM7-203ENST00000359895 SLC25A20O43772 301 aa12.51□□□□□ -0.41
PDLIM7-203ENST00000359895 LINC01620Q4KN68 170 aa12.51□□□□□ -0.41
PDLIM7-203ENST00000359895 TRAV13-2A0A0B4J235 113 aa12.5□□□□□ -0.41
PDLIM7-203ENST00000359895 MALP21145 153 aa12.5□□□□□ -0.41
PDLIM7-203ENST00000359895 CFAP161Q6P656 301 aa12.5□□□□□ -0.41
PDLIM7-203ENST00000359895 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
PDLIM7-203ENST00000359895 Q8N3U1 123 aa12.5□□□□□ -0.41
PDLIM7-203ENST00000359895 CKS1BP61024 79 aa12.49□□□□□ -0.41
PDLIM7-203ENST00000359895 KPRPQ5T749 579 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-203ENST00000359895 LINC01600Q96MT4 127 aa12.49□□□□□ -0.41
PDLIM7-203ENST00000359895 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
PDLIM7-203ENST00000359895 PRR34Q9NV39 138 aa12.48□□□□□ -0.41
PDLIM7-203ENST00000359895 IGLV10-54A0A075B6I4 117 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 FOXI1Q12951 378 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 Q6ZTC4 211 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 PPDPFLQ8WWR9 84 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 LST1O00453 97 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 CRPP02741 224 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 PFN2P35080 140 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 CCL18P55774 89 aa12.47□□□□□ -0.41
PDLIM7-203ENST00000359895 PKD1L1Q8TDX9 2849 aa12.46□□□□□ -0.41
PDLIM7-203ENST00000359895 TRBV10-2A0A0K0K1G8 114 aa12.46□□□□□ -0.42
PDLIM7-203ENST00000359895 KIAA0087Q14695 138 aa12.46□□□□□ -0.42
PDLIM7-203ENST00000359895 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
PDLIM7-203ENST00000359895 COX17Q14061 63 aa12.45□□□□□ -0.42
PDLIM7-203ENST00000359895 ANKRD29Q8N6D5 301 aa12.45□□□□□ -0.42
PDLIM7-203ENST00000359895 KLK12Q9UKR0 248 aa12.45□□□□□ -0.42
PDLIM7-203ENST00000359895 KLK5Q9Y337 293 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-203ENST00000359895 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
PDLIM7-203ENST00000359895 TRAV8-4A0A0B4J246 113 aa12.43□□□□□ -0.42
PDLIM7-203ENST00000359895 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
PDLIM7-203ENST00000359895 CLEC2BQ92478 149 aa12.43□□□□□ -0.42
PDLIM7-203ENST00000359895 C2orf82Q6UX34 121 aa12.43□□□□□ -0.42
PDLIM7-203ENST00000359895 IGKV2-28A0A075B6P5 120 aa12.42□□□□□ -0.42
PDLIM7-203ENST00000359895 H3BT86 120 aa12.42□□□□□ -0.42
PDLIM7-203ENST00000359895 IGKV2D-28P01615 120 aa12.42□□□□□ -0.42
PDLIM7-203ENST00000359895 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
PDLIM7-203ENST00000359895 RPL28P46779 137 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-203ENST00000359895 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
PDLIM7-203ENST00000359895 SPATA25Q9BR10 227 aa12.41□□□□□ -0.42
PDLIM7-203ENST00000359895 DEFB131BA0A096LNP1 70 aa12.4□□□□□ -0.42
PDLIM7-203ENST00000359895 NANOS2P60321 138 aaKnown RBP12.4□□□□□ -0.42
PDLIM7-203ENST00000359895 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
PDLIM7-203ENST00000359895 CARD19Q96LW7 228 aa12.39□□□□□ -0.43
PDLIM7-203ENST00000359895 SPAG11BQ08648 103 aa12.39□□□□□ -0.43
PDLIM7-203ENST00000359895 WFDC10BQ8IUB3 73 aa12.38□□□□□ -0.43
PDLIM7-203ENST00000359895 UBE2WQ96B02 151 aa12.38□□□□□ -0.43
PDLIM7-203ENST00000359895 TRACP01848 142 aa12.36□□□□□ -0.43
PDLIM7-203ENST00000359895 ESRGQ1W209 222 aa12.36□□□□□ -0.43
PDLIM7-203ENST00000359895 NDUFC2O95298 119 aa12.35□□□□□ -0.43
PDLIM7-203ENST00000359895 TM2D3Q9BRN9 247 aa12.35□□□□□ -0.43
PDLIM7-203ENST00000359895 MGAM2Q2M2H8 2515 aa12.35□□□□□ -0.43
PDLIM7-203ENST00000359895 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-203ENST00000359895 TRAV10A0A0B4J240 114 aa12.33□□□□□ -0.44
PDLIM7-203ENST00000359895 SMIM11BQ8TCY0 68 aa12.33□□□□□ -0.44
PDLIM7-203ENST00000359895 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
PDLIM7-203ENST00000359895 H0YGX0 51 aa12.32□□□□□ -0.44
PDLIM7-203ENST00000359895 K7EIL1 84 aa12.32□□□□□ -0.44
PDLIM7-203ENST00000359895 LINC01556Q5JQF7 62 aa12.32□□□□□ -0.44
PDLIM7-203ENST00000359895 C15orf53Q8NAA6 179 aa12.32□□□□□ -0.44
PDLIM7-203ENST00000359895 OR13C6PQ8NH95 151 aa12.32□□□□□ -0.44
PDLIM7-203ENST00000359895 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
PDLIM7-203ENST00000359895 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-203ENST00000359895 PCP4P48539 62 aa12.3□□□□□ -0.44
PDLIM7-203ENST00000359895 UNQ6190/PRO20217Q6UXQ8 127 aa12.3□□□□□ -0.44
PDLIM7-203ENST00000359895 C6orf223Q8N319 242 aa12.3□□□□□ -0.44
PDLIM7-203ENST00000359895 SIGMAR1Q99720 223 aa12.3□□□□□ -0.44
PDLIM7-203ENST00000359895 PRB2P02812 416 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-203ENST00000359895 C9orf116Q5BN46 136 aaPredicted RBP12.29□□□□□ -0.44
PDLIM7-203ENST00000359895 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
PDLIM7-203ENST00000359895 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
PDLIM7-203ENST00000359895 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.44
PDLIM7-203ENST00000359895 FAM218AQ96MZ4 157 aa12.27□□□□□ -0.44
PDLIM7-203ENST00000359895 TEX49A0A1B0GTD5 131 aa12.26□□□□□ -0.45
PDLIM7-203ENST00000359895 NOTCH1P46531 2555 aa12.26□□□□□ -0.45
PDLIM7-203ENST00000359895 ZNF561-AS1K7EIQ3 104 aa12.26□□□□□ -0.45
PDLIM7-203ENST00000359895 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
PDLIM7-203ENST00000359895 TMEM126AQ9H061 195 aa12.26□□□□□ -0.45
PDLIM7-203ENST00000359895 DNAH10OSP0CZ25 163 aa12.25□□□□□ -0.45
PDLIM7-203ENST00000359895 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
PDLIM7-203ENST00000359895 CDIP1Q9H305 208 aa12.25□□□□□ -0.45
PDLIM7-203ENST00000359895 LINC00526Q96FQ7 95 aa12.24□□□□□ -0.45
PDLIM7-203ENST00000359895 F8WDY8 70 aa12.23□□□□□ -0.45
PDLIM7-203ENST00000359895 DNAL4O96015 105 aa12.23□□□□□ -0.45
PDLIM7-203ENST00000359895 BAALC-AS2P0C853 105 aa12.23□□□□□ -0.45
PDLIM7-203ENST00000359895 C2orf48Q96LS8 159 aa12.22□□□□□ -0.45
PDLIM7-203ENST00000359895 C6orf48Q9UBA6 75 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms