RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
VCP-201ENST00000358901 COX17Q14061 63 aa9.82□□□□□ -0.84
VCP-201ENST00000358901 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
VCP-201ENST00000358901 A0A087WVE0 104 aa9.81□□□□□ -0.84
VCP-201ENST00000358901 CHKB-CPT1BH3BT56 60 aa9.81□□□□□ -0.84
VCP-201ENST00000358901 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
VCP-201ENST00000358901 A0A087WYN8 130 aa9.8□□□□□ -0.84
VCP-201ENST00000358901 LINC00315P59091 139 aa9.8□□□□□ -0.84
VCP-201ENST00000358901 C14orf177Q52M58 125 aa9.8□□□□□ -0.84
VCP-201ENST00000358901 Q6JHZ5 121 aa9.8□□□□□ -0.84
VCP-201ENST00000358901 FHL2Q14192 279 aa9.8□□□□□ -0.84
VCP-201ENST00000358901 SMR3AQ99954 134 aa9.8□□□□□ -0.84
VCP-201ENST00000358901 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
VCP-201ENST00000358901 RPL37AP8A6NKH3 93 aa9.78□□□□□ -0.84
VCP-201ENST00000358901 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
VCP-201ENST00000358901 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
VCP-201ENST00000358901 PLA2G2AP14555 144 aa9.77□□□□□ -0.84
VCP-201ENST00000358901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.84
VCP-201ENST00000358901 WFDC10BQ8IUB3 73 aa9.77□□□□□ -0.84
VCP-201ENST00000358901 Q8N814 137 aa9.77□□□□□ -0.84
VCP-201ENST00000358901 CDH23Q9H251 3354 aa9.77□□□□□ -0.84
VCP-201ENST00000358901 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
VCP-201ENST00000358901 CHD9Q3L8U1 2897 aa9.77□□□□□ -0.85
VCP-201ENST00000358901 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 CDIP1Q9H305 208 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 SZT2Q5T011 3432 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 CENPEQ02224 2701 aa9.76□□□□□ -0.85
VCP-201ENST00000358901 SHISA2Q6UWI4 295 aa9.75□□□□□ -0.85
VCP-201ENST00000358901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.75□□□□□ -0.85
VCP-201ENST00000358901 MUC7Q8TAX7 377 aa9.75□□□□□ -0.85
VCP-201ENST00000358901 WFDC13Q8IUB5 93 aa9.75□□□□□ -0.85
VCP-201ENST00000358901 DHRS4-AS1Q9P1J3 65 aa9.74□□□□□ -0.85
VCP-201ENST00000358901 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
VCP-201ENST00000358901 PRR4Q16378 134 aa9.74□□□□□ -0.85
VCP-201ENST00000358901 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
VCP-201ENST00000358901 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
VCP-201ENST00000358901 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
VCP-201ENST00000358901 Q9UF83 564 aa9.72□□□□□ -0.85
VCP-201ENST00000358901 CFAP54Q96N23 3096 aa9.72□□□□□ -0.85
VCP-201ENST00000358901 NDUFC1O43677 76 aa9.72□□□□□ -0.85
VCP-201ENST00000358901 EGFEM1PQ0D2K5 195 aa9.72□□□□□ -0.85
VCP-201ENST00000358901 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
VCP-201ENST00000358901 NDUFC2-KCTD14E9PQ53 114 aa9.72□□□□□ -0.85
VCP-201ENST00000358901 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.85
VCP-201ENST00000358901 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
VCP-201ENST00000358901 RETNQ9HD89 108 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 XIRP2A4UGR9 3374 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 A0A0J9YWU9 116 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 CELA1Q9UNI1 258 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 MGAM2Q2M2H8 2515 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 A8MTW9 85 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 TRIOO75962 3097 aa9.7□□□□□ -0.86
VCP-201ENST00000358901 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 Q8N2B8 174 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 LINC00846Q9NV44 126 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
VCP-201ENST00000358901 HECTD1Q9ULT8 2610 aa9.68□□□□□ -0.86
VCP-201ENST00000358901 M0QXV9 152 aa9.68□□□□□ -0.86
VCP-201ENST00000358901 ATRQ13535 2644 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 Q6ZTC4 211 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 VCANP13611 3396 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 COL4A2P08572 1712 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 TRAV7A0A075B6U4 112 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
VCP-201ENST00000358901 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
VCP-201ENST00000358901 Q8N3U1 123 aa9.66□□□□□ -0.86
VCP-201ENST00000358901 FAM30AQ9NZY2 134 aa9.65□□□□□ -0.86
VCP-201ENST00000358901 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.87
VCP-201ENST00000358901 IL17DQ8TAD2 202 aa9.65□□□□□ -0.87
VCP-201ENST00000358901 ATP5EP56381 51 aaPredicted RBP9.64□□□□□ -0.87
VCP-201ENST00000358901 C1orf137Q5JT78 98 aa9.64□□□□□ -0.87
VCP-201ENST00000358901 M0R2N4 97 aa9.63□□□□□ -0.87
VCP-201ENST00000358901 C16orf95Q9H693 158 aa9.63□□□□□ -0.87
VCP-201ENST00000358901 LINC00575Q6W349 94 aa9.62□□□□□ -0.87
VCP-201ENST00000358901 MAST4O15021 2626 aa9.62□□□□□ -0.87
VCP-201ENST00000358901 SOSTDC1Q6X4U4 206 aa9.61□□□□□ -0.87
VCP-201ENST00000358901 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
VCP-201ENST00000358901 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
VCP-201ENST00000358901 TRBV7-7A0A0K0K1E9 115 aa9.6□□□□□ -0.87
VCP-201ENST00000358901 COL6A3P12111 3177 aa9.6□□□□□ -0.87
VCP-201ENST00000358901 PCSK5Q92824 1860 aa9.6□□□□□ -0.87
VCP-201ENST00000358901 Q6ZVQ6 151 aa9.6□□□□□ -0.87
VCP-201ENST00000358901 SMIM26A0A096LP01 95 aa9.59□□□□□ -0.87
VCP-201ENST00000358901 LYPD5Q6UWN5 251 aa9.59□□□□□ -0.87
VCP-201ENST00000358901 IGLV5-45A0A087WSX0 123 aa9.59□□□□□ -0.87
VCP-201ENST00000358901 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.88
VCP-201ENST00000358901 PLAC8L1A1L4L8 177 aa9.58□□□□□ -0.88
VCP-201ENST00000358901 FAM218AQ96MZ4 157 aa9.58□□□□□ -0.88
VCP-201ENST00000358901 Q6ZRU5 148 aa9.57□□□□□ -0.88
VCP-201ENST00000358901 EYSQ5T1H1 3165 aa9.57□□□□□ -0.88
VCP-201ENST00000358901 LINC01561Q8N1V8 128 aa9.56□□□□□ -0.88
VCP-201ENST00000358901 COL27A1Q8IZC6 1860 aaPredicted RBP9.56□□□□□ -0.88
VCP-201ENST00000358901 TRANK1O15050 2925 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms