RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
RTFDC1-202ENST00000357348 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
RTFDC1-202ENST00000357348 BAALC-AS2P0C853 105 aa8.9□□□□□ -0.98
RTFDC1-202ENST00000357348 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
RTFDC1-202ENST00000357348 APOC4P55056 127 aa8.9□□□□□ -0.98
RTFDC1-202ENST00000357348 C5orf38Q86SI9 138 aa8.9□□□□□ -0.98
RTFDC1-202ENST00000357348 DEFB4AO15263 64 aa8.89□□□□□ -0.99
RTFDC1-202ENST00000357348 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
RTFDC1-202ENST00000357348 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
RTFDC1-202ENST00000357348 RPL28P46779 137 aaKnown RBP8.89□□□□□ -0.99
RTFDC1-202ENST00000357348 CDC42SE2Q9NRR3 84 aa8.89□□□□□ -0.99
RTFDC1-202ENST00000357348 TRGV1A0A0A0MS02 117 aa8.88□□□□□ -0.99
RTFDC1-202ENST00000357348 NTM-AS1Q6ZSK4 140 aa8.88□□□□□ -0.99
RTFDC1-202ENST00000357348 RETNQ9HD89 108 aa8.88□□□□□ -0.99
RTFDC1-202ENST00000357348 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
RTFDC1-202ENST00000357348 MRAPQ8TCY5 172 aa8.88□□□□□ -0.99
RTFDC1-202ENST00000357348 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-202ENST00000357348 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
RTFDC1-202ENST00000357348 TENM3Q9P273 2699 aa8.87□□□□□ -0.99
RTFDC1-202ENST00000357348 TRAV13-2A0A0B4J235 113 aa8.86□□□□□ -0.99
RTFDC1-202ENST00000357348 A0A0U1RRA0 63 aa8.86□□□□□ -0.99
RTFDC1-202ENST00000357348 K7EIL1 84 aa8.86□□□□□ -0.99
RTFDC1-202ENST00000357348 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
RTFDC1-202ENST00000357348 X6R8D5 127 aa8.86□□□□□ -0.99
RTFDC1-202ENST00000357348 UQCRQO14949 82 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 HIST1H4AP62805 103 aaKnown RBP8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 TRAV13-1A0A0B4J241 112 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 K7EQD1 137 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 MALP21145 153 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 Q6ZTI0 123 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
RTFDC1-202ENST00000357348 C16orf74Q96GX8 76 aa8.84□□□□□ -0.99
RTFDC1-202ENST00000357348 OBSCN-AS1Q96MR7 158 aa8.84□□□□□ -0.99
RTFDC1-202ENST00000357348 IGKV2-28A0A075B6P5 120 aa8.83□□□□□ -1
RTFDC1-202ENST00000357348 IGKV2D-28P01615 120 aa8.83□□□□□ -1
RTFDC1-202ENST00000357348 LINC00337Q8N6G1 96 aa8.82□□□□□ -1
RTFDC1-202ENST00000357348 IGHV4-28A0A0C4DH34 117 aa8.82□□□□□ -1
RTFDC1-202ENST00000357348 DEFB130BP0DP73 79 aa8.82□□□□□ -1
RTFDC1-202ENST00000357348 DEFB130AP0DP74 79 aa8.82□□□□□ -1
RTFDC1-202ENST00000357348 C2orf48Q96LS8 159 aa8.82□□□□□ -1
RTFDC1-202ENST00000357348 CRPP02741 224 aa8.81□□□□□ -1
RTFDC1-202ENST00000357348 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
RTFDC1-202ENST00000357348 C9orf153Q5TBE3 101 aa8.81□□□□□ -1
RTFDC1-202ENST00000357348 COX7CP15954 63 aa8.81□□□□□ -1
RTFDC1-202ENST00000357348 COL7A1Q02388 2944 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 COX7B2Q8TF08 81 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 TRGV2A0A075B6R0 118 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 H0YGX0 51 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 TMEM243Q9BU79 118 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 Q9HAA7 133 aa8.8□□□□□ -1
RTFDC1-202ENST00000357348 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
RTFDC1-202ENST00000357348 GAGE2AQ6NT46 116 aa8.79□□□□□ -1
RTFDC1-202ENST00000357348 SND1-IT1Q9HBX3 110 aa8.79□□□□□ -1
RTFDC1-202ENST00000357348 CRYGAP11844 174 aa8.78□□□□□ -1
RTFDC1-202ENST00000357348 Q8NAQ8 132 aa8.78□□□□□ -1
RTFDC1-202ENST00000357348 SMIM11BQ8TCY0 68 aa8.78□□□□□ -1
RTFDC1-202ENST00000357348 SMIM9A6NGZ8 99 aa8.78□□□□□ -1
RTFDC1-202ENST00000357348 ATOX1O00244 68 aa8.78□□□□□ -1
RTFDC1-202ENST00000357348 CELA1Q9UNI1 258 aa8.78□□□□□ -1
RTFDC1-202ENST00000357348 A0A087WYN8 130 aa8.77□□□□□ -1.01
RTFDC1-202ENST00000357348 Q6JHZ5 121 aa8.77□□□□□ -1.01
RTFDC1-202ENST00000357348 MEGF8Q7Z7M0 2845 aa8.77□□□□□ -1.01
RTFDC1-202ENST00000357348 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
RTFDC1-202ENST00000357348 MIFP14174 115 aa8.77□□□□□ -1.01
RTFDC1-202ENST00000357348 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
RTFDC1-202ENST00000357348 A0A1B0GX51 115 aa8.76□□□□□ -1.01
RTFDC1-202ENST00000357348 UBE2L6O14933 153 aa8.76□□□□□ -1.01
RTFDC1-202ENST00000357348 CCL18P55774 89 aa8.76□□□□□ -1.01
RTFDC1-202ENST00000357348 C9orf129Q5T035 196 aaKnown RBP8.76□□□□□ -1.01
RTFDC1-202ENST00000357348 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
RTFDC1-202ENST00000357348 HUWE1Q7Z6Z7 4374 aaKnown RBP8.76□□□□□ -1.01
RTFDC1-202ENST00000357348 IGHV3OR16-9A0A0B4J2B5 98 aa8.75□□□□□ -1.01
RTFDC1-202ENST00000357348 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
RTFDC1-202ENST00000357348 DNAL4O96015 105 aa8.75□□□□□ -1.01
RTFDC1-202ENST00000357348 RPL18AQ02543 176 aaKnown RBP8.74□□□□□ -1.01
RTFDC1-202ENST00000357348 A0A087WZ39 114 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 A0A0J9YWU9 116 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 LOC100131303A0A0U1RQF7 123 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 HTN3P15516 51 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 LINC00158P58513 81 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 DAD1P61803 113 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 C14orf132Q9NPU4 83 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
RTFDC1-202ENST00000357348 DNAH9Q9NYC9 4486 aa8.72□□□□□ -1.01
RTFDC1-202ENST00000357348 PRKDCP78527 4128 aaKnown RBP8.72□□□□□ -1.01
RTFDC1-202ENST00000357348 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
RTFDC1-202ENST00000357348 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
RTFDC1-202ENST00000357348 LYRM9A8MSI8 78 aa8.71□□□□□ -1.02
RTFDC1-202ENST00000357348 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.02
RTFDC1-202ENST00000357348 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.02
RTFDC1-202ENST00000357348 LECT2O14960 151 aa8.7□□□□□ -1.02
RTFDC1-202ENST00000357348 SS18Q15532 418 aa8.7□□□□□ -1.02
RTFDC1-202ENST00000357348 TOMM7Q9P0U1 55 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms