RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 LINC00242Q5T6M2 205 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 HCG22E2RYF7 251 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 HIGD2AQ9BW72 106 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 A0A1B0GW54 56 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 H0Y9J4 135 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 PRR9Q5T870 116 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 Q8IZM0 81 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 LOC110117498A0A087WWA1 95 aa3.66□□□□□ -1.82
SKP1-202ENST00000353411 PRM2P04554 102 aa3.65□□□□□ -1.82
SKP1-202ENST00000353411 MUC22E2RYF6 1773 aaPredicted RBP3.65□□□□□ -1.82
SKP1-202ENST00000353411 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.82
SKP1-202ENST00000353411 C1orf158Q8N1D5 194 aa3.65□□□□□ -1.82
SKP1-202ENST00000353411 UNQ9165/PRO28630Q6UXU0 137 aa3.65□□□□□ -1.82
SKP1-202ENST00000353411 Q5XG85 94 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 DHRS4-AS1Q9P1J3 65 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 BAHCC1Q9P281 2608 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 C8orf87E5RJ46 101 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 NANOS2P60321 138 aaKnown RBP3.65□□□□□ -1.83
SKP1-202ENST00000353411 MRGPRG-AS1Q2M3A8 158 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 CDC42SE2Q9NRR3 84 aa3.65□□□□□ -1.83
SKP1-202ENST00000353411 IGLV10-54A0A075B6I4 117 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 LCA10Q71F78 164 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 ZNF73O43830 326 aaPredicted RBP3.64□□□□□ -1.83
SKP1-202ENST00000353411 DEFB1P60022 68 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 IGLV5-39A0A0G2JS06 123 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 ZNF580Q9UK33 172 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 LY6LH3BQJ8 138 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 ZNF843Q8N446 348 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 CDSNQ15517 529 aa3.64□□□□□ -1.83
SKP1-202ENST00000353411 DMBT1Q9UGM3 2413 aaPredicted RBP3.64□□□□□ -1.83
SKP1-202ENST00000353411 LY6G6EA0A0G2JKS1 128 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 U3KQA8 63 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 H3BPC8 53 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 LINC00575Q6W349 94 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 BPESC1Q9GZL8 116 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 ATRQ13535 2644 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 CHCHD7Q9BUK0 85 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 TM2D3Q9BRN9 247 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 IGFL2Q6UWQ7 119 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 MAP1AP78559 2803 aaPredicted RBP3.63□□□□□ -1.83
SKP1-202ENST00000353411 K7EQG2 157 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 FAM218AQ96MZ4 157 aa3.63□□□□□ -1.83
SKP1-202ENST00000353411 ZNF706Q9Y5V0 76 aaPredicted RBP3.63□□□□□ -1.83
SKP1-202ENST00000353411 M0R378 163 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 STAB1Q9NY15 2570 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 C10orf25Q5T742 122 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 Q6ZQT0 140 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 LY6HO94772 140 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 WFDC13Q8IUB5 93 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 Q8N2B8 174 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 COX6A2Q02221 97 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 SPAG11AQ6PDA7 123 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 FAM215AQ9Y5M1 114 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 FAM229AH3BQW9 127 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 CHCHD10Q8WYQ3 142 aaPredicted RBP3.62□□□□□ -1.83
SKP1-202ENST00000353411 TRAV10A0A0B4J240 114 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 DEFB113Q30KQ7 82 aa3.62□□□□□ -1.83
SKP1-202ENST00000353411 REG3AQ06141 175 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 UBE2DNLQ8IWF7 75 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 MSMBP08118 114 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 Q1T7F1 81 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 LITAFQ99732 161 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 H0Y9P7 68 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 A0A096LPF7 62 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 MSMPQ1L6U9 139 aa3.61□□□□□ -1.83
SKP1-202ENST00000353411 ELOF1P60002 83 aaKnown RBP3.6□□□□□ -1.83
SKP1-202ENST00000353411 PRO0255Q9UI72 69 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 PROK1P58294 105 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 Q6ZTI0 123 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 RETNLBQ9BQ08 111 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 A0A0C4DFX4 3053 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 PSCAO43653 123 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 PLA2G2AP14555 144 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 LINC00959A0A1B0GUT2 108 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 FBXL19-AS1Q494R0 122 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 Q6ZRU5 148 aa3.6□□□□□ -1.83
SKP1-202ENST00000353411 Q8NA96 180 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 SPATA3Q8NHX4 192 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 SMIM29Q86T20 159 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.83
SKP1-202ENST00000353411 C1orf137Q5JT78 98 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 FLNBO75369 2602 aaKnown RBP3.59□□□□□ -1.83
SKP1-202ENST00000353411 A8MUN3 132 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 C6orf223Q8N319 242 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 RBM12B-AS1Q9P1G2 102 aa3.59□□□□□ -1.83
SKP1-202ENST00000353411 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.84
SKP1-202ENST00000353411 IGHV4-59P01825 116 aa3.59□□□□□ -1.84
SKP1-202ENST00000353411 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.84
SKP1-202ENST00000353411 DEFB114Q30KQ6 69 aa3.58□□□□□ -1.84
SKP1-202ENST00000353411 CFAP54Q96N23 3096 aa3.58□□□□□ -1.84
SKP1-202ENST00000353411 COL4A2P08572 1712 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms