RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 REG3AQ06141 175 aa11.46□□□□□ -0.58
SAMM50-201ENST00000350028 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.58
SAMM50-201ENST00000350028 RETNQ9HD89 108 aa11.46□□□□□ -0.58
SAMM50-201ENST00000350028 LINC00158P58513 81 aa11.45□□□□□ -0.58
SAMM50-201ENST00000350028 MIR7-3HGQ8N6C7 128 aa11.45□□□□□ -0.58
SAMM50-201ENST00000350028 M0QXV9 152 aa11.44□□□□□ -0.58
SAMM50-201ENST00000350028 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
SAMM50-201ENST00000350028 COX7A2LO14548 114 aa11.43□□□□□ -0.58
SAMM50-201ENST00000350028 LINC01620Q4KN68 170 aa11.43□□□□□ -0.58
SAMM50-201ENST00000350028 C9JAW5 83 aa11.42□□□□□ -0.58
SAMM50-201ENST00000350028 SLC25A20O43772 301 aa11.42□□□□□ -0.58
SAMM50-201ENST00000350028 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
SAMM50-201ENST00000350028 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
SAMM50-201ENST00000350028 Q8N3U1 123 aa11.41□□□□□ -0.58
SAMM50-201ENST00000350028 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
SAMM50-201ENST00000350028 LINC01600Q96MT4 127 aa11.4□□□□□ -0.58
SAMM50-201ENST00000350028 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
SAMM50-201ENST00000350028 CXCL5P42830 114 aa11.4□□□□□ -0.58
SAMM50-201ENST00000350028 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
SAMM50-201ENST00000350028 MALP21145 153 aa11.39□□□□□ -0.59
SAMM50-201ENST00000350028 FOXI1Q12951 378 aa11.39□□□□□ -0.59
SAMM50-201ENST00000350028 DNAH3Q8TD57 4116 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 TRBV10-2A0A0K0K1G8 114 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 PFN2P35080 140 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 CCL18P55774 89 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 CKS1BP61024 79 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 KPRPQ5T749 579 aaPredicted RBP11.38□□□□□ -0.59
SAMM50-201ENST00000350028 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 PPDPFLQ8WWR9 84 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 PRR34Q9NV39 138 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 LST1O00453 97 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 Q6ZTC4 211 aa11.38□□□□□ -0.59
SAMM50-201ENST00000350028 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
SAMM50-201ENST00000350028 NBEAL1Q6ZS30 2694 aa11.37□□□□□ -0.59
SAMM50-201ENST00000350028 CRPP02741 224 aa11.36□□□□□ -0.59
SAMM50-201ENST00000350028 CLEC2BQ92478 149 aa11.36□□□□□ -0.59
SAMM50-201ENST00000350028 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
SAMM50-201ENST00000350028 A0A0J9YWU9 116 aa11.35□□□□□ -0.59
SAMM50-201ENST00000350028 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
SAMM50-201ENST00000350028 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
SAMM50-201ENST00000350028 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
SAMM50-201ENST00000350028 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
SAMM50-201ENST00000350028 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
SAMM50-201ENST00000350028 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
SAMM50-201ENST00000350028 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
SAMM50-201ENST00000350028 COX17Q14061 63 aa11.34□□□□□ -0.59
SAMM50-201ENST00000350028 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
SAMM50-201ENST00000350028 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.59
SAMM50-201ENST00000350028 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.6
SAMM50-201ENST00000350028 H3BT86 120 aa11.33□□□□□ -0.6
SAMM50-201ENST00000350028 RPL28P46779 137 aaKnown RBP11.33□□□□□ -0.6
SAMM50-201ENST00000350028 C11orf45Q8TAV5 145 aa11.33□□□□□ -0.6
SAMM50-201ENST00000350028 LINC00337Q8N6G1 96 aa11.32□□□□□ -0.6
SAMM50-201ENST00000350028 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
SAMM50-201ENST00000350028 NANOS2P60321 138 aaKnown RBP11.31□□□□□ -0.6
SAMM50-201ENST00000350028 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
SAMM50-201ENST00000350028 SPAG11BQ08648 103 aa11.29□□□□□ -0.6
SAMM50-201ENST00000350028 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
SAMM50-201ENST00000350028 UBE2WQ96B02 151 aa11.29□□□□□ -0.6
SAMM50-201ENST00000350028 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
SAMM50-201ENST00000350028 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
SAMM50-201ENST00000350028 TRACP01848 142 aa11.28□□□□□ -0.6
SAMM50-201ENST00000350028 ESRGQ1W209 222 aa11.28□□□□□ -0.6
SAMM50-201ENST00000350028 MUC7Q8TAX7 377 aa11.28□□□□□ -0.6
SAMM50-201ENST00000350028 NDUFC2O95298 119 aa11.26□□□□□ -0.61
SAMM50-201ENST00000350028 PCP4P48539 62 aa11.26□□□□□ -0.61
SAMM50-201ENST00000350028 SMIM11BQ8TCY0 68 aa11.26□□□□□ -0.61
SAMM50-201ENST00000350028 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
SAMM50-201ENST00000350028 H0YGX0 51 aa11.24□□□□□ -0.61
SAMM50-201ENST00000350028 UNQ6190/PRO20217Q6UXQ8 127 aa11.24□□□□□ -0.61
SAMM50-201ENST00000350028 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
SAMM50-201ENST00000350028 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
SAMM50-201ENST00000350028 K7EIL1 84 aa11.23□□□□□ -0.61
SAMM50-201ENST00000350028 GVQW2A0A096LPI5 108 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-201ENST00000350028 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
SAMM50-201ENST00000350028 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-201ENST00000350028 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
SAMM50-201ENST00000350028 C6orf223Q8N319 242 aa11.23□□□□□ -0.61
SAMM50-201ENST00000350028 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
SAMM50-201ENST00000350028 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
SAMM50-201ENST00000350028 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.61
SAMM50-201ENST00000350028 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.61
SAMM50-201ENST00000350028 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.62
SAMM50-201ENST00000350028 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.62
SAMM50-201ENST00000350028 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.62
SAMM50-201ENST00000350028 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
SAMM50-201ENST00000350028 LINC00526Q96FQ7 95 aa11.19□□□□□ -0.62
SAMM50-201ENST00000350028 BAALC-AS2P0C853 105 aa11.18□□□□□ -0.62
SAMM50-201ENST00000350028 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
SAMM50-201ENST00000350028 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
SAMM50-201ENST00000350028 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
SAMM50-201ENST00000350028 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
SAMM50-201ENST00000350028 DNAH10OSP0CZ25 163 aa11.16□□□□□ -0.62
SAMM50-201ENST00000350028 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
SAMM50-201ENST00000350028 C6orf48Q9UBA6 75 aa11.16□□□□□ -0.62
SAMM50-201ENST00000350028 DNAL4O96015 105 aa11.15□□□□□ -0.63
SAMM50-201ENST00000350028 A0A087WYN8 130 aa11.14□□□□□ -0.63
SAMM50-201ENST00000350028 F8WDY8 70 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms