RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 LINC00242Q5T6M2 205 aa11.17□□□□□ -0.62
SRPK1-201ENST00000346162 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
SRPK1-201ENST00000346162 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
SRPK1-201ENST00000346162 NANOS2P60321 138 aaKnown RBP11.16□□□□□ -0.62
SRPK1-201ENST00000346162 CHCHD10Q8WYQ3 142 aaPredicted RBP11.15□□□□□ -0.62
SRPK1-201ENST00000346162 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
SRPK1-201ENST00000346162 AMELXQ99217 191 aa11.15□□□□□ -0.62
SRPK1-201ENST00000346162 UBE2AP49459 152 aa11.14□□□□□ -0.63
SRPK1-201ENST00000346162 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
SRPK1-201ENST00000346162 SMIM1B2RUZ4 78 aa11.14□□□□□ -0.63
SRPK1-201ENST00000346162 FAM30AQ9NZY2 134 aa11.14□□□□□ -0.63
SRPK1-201ENST00000346162 LOC100131303A0A0U1RQF7 123 aa11.13□□□□□ -0.63
SRPK1-201ENST00000346162 BBC3Q96PG8 261 aaPredicted RBP11.13□□□□□ -0.63
SRPK1-201ENST00000346162 Q8N814 137 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 ANKRD17O75179 2603 aaKnown RBP11.12□□□□□ -0.63
SRPK1-201ENST00000346162 PTPRBP23467 1997 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 LY6G6DO95868 133 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 FHL2Q14192 279 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 F8WDY8 70 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 Q8N2B8 174 aa11.12□□□□□ -0.63
SRPK1-201ENST00000346162 BPTFQ12830 3046 aa11.11□□□□□ -0.63
SRPK1-201ENST00000346162 TRBV10-3A0A0K0K1G6 114 aa11.1□□□□□ -0.63
SRPK1-201ENST00000346162 SMCR5Q8TEV8 140 aa11.1□□□□□ -0.63
SRPK1-201ENST00000346162 COX6A2Q02221 97 aa11.1□□□□□ -0.63
SRPK1-201ENST00000346162 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
SRPK1-201ENST00000346162 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
SRPK1-201ENST00000346162 WIPF1O43516 503 aa11.09□□□□□ -0.63
SRPK1-201ENST00000346162 A0A087WZ39 114 aa11.08□□□□□ -0.64
SRPK1-201ENST00000346162 LINC01547P58512 204 aaPredicted RBP11.08□□□□□ -0.64
SRPK1-201ENST00000346162 Q6ZVQ6 151 aa11.08□□□□□ -0.64
SRPK1-201ENST00000346162 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
SRPK1-201ENST00000346162 BRCA2P51587 3418 aa11.08□□□□□ -0.64
SRPK1-201ENST00000346162 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
SRPK1-201ENST00000346162 LINC00337Q8N6G1 96 aa11.07□□□□□ -0.64
SRPK1-201ENST00000346162 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
SRPK1-201ENST00000346162 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
SRPK1-201ENST00000346162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.05□□□□□ -0.64
SRPK1-201ENST00000346162 LINC00959A0A1B0GUT2 108 aa11.05□□□□□ -0.64
SRPK1-201ENST00000346162 COX17Q14061 63 aa11.05□□□□□ -0.64
SRPK1-201ENST00000346162 FAM218AQ96MZ4 157 aa11.05□□□□□ -0.64
SRPK1-201ENST00000346162 A0A0C4DFX4 3053 aa11.05□□□□□ -0.64
SRPK1-201ENST00000346162 WFDC13Q8IUB5 93 aa11.04□□□□□ -0.64
SRPK1-201ENST00000346162 DEFB131BA0A096LNP1 70 aa11.04□□□□□ -0.64
SRPK1-201ENST00000346162 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
SRPK1-201ENST00000346162 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
SRPK1-201ENST00000346162 PRR3P79522 188 aaKnown RBP11.03□□□□□ -0.64
SRPK1-201ENST00000346162 H0Y9J4 135 aa11.03□□□□□ -0.64
SRPK1-201ENST00000346162 CD164L2Q6UWJ8 174 aa11.03□□□□□ -0.64
SRPK1-201ENST00000346162 BCE1O60756 84 aa11.03□□□□□ -0.64
SRPK1-201ENST00000346162 SMR3AQ99954 134 aa11.03□□□□□ -0.64
SRPK1-201ENST00000346162 Q8IZM0 81 aa11.02□□□□□ -0.64
SRPK1-201ENST00000346162 KIF25-AS1Q9Y6Z4 181 aa11.02□□□□□ -0.65
SRPK1-201ENST00000346162 TRANK1O15050 2925 aa11.02□□□□□ -0.65
SRPK1-201ENST00000346162 PLAC8L1A1L4L8 177 aa11.01□□□□□ -0.65
SRPK1-201ENST00000346162 PLA2G2AP14555 144 aa11.01□□□□□ -0.65
SRPK1-201ENST00000346162 A0A0J9YWU9 116 aa11□□□□□ -0.65
SRPK1-201ENST00000346162 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
SRPK1-201ENST00000346162 LINC00474Q9P2X8 69 aa10.99□□□□□ -0.65
SRPK1-201ENST00000346162 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
SRPK1-201ENST00000346162 Q6ZSN1 163 aa10.99□□□□□ -0.65
SRPK1-201ENST00000346162 IGKV4-1P06312 121 aa10.98□□□□□ -0.65
SRPK1-201ENST00000346162 LINC01561Q8N1V8 128 aa10.98□□□□□ -0.65
SRPK1-201ENST00000346162 LINC00208Q96KT6 92 aa10.98□□□□□ -0.65
SRPK1-201ENST00000346162 LELP1Q5T871 98 aa10.97□□□□□ -0.65
SRPK1-201ENST00000346162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
SRPK1-201ENST00000346162 CXCL6P80162 114 aa10.96□□□□□ -0.65
SRPK1-201ENST00000346162 ZNF73O43830 326 aaPredicted RBP10.96□□□□□ -0.65
SRPK1-201ENST00000346162 LINC00315P59091 139 aa10.96□□□□□ -0.66
SRPK1-201ENST00000346162 KPRPQ5T749 579 aaPredicted RBP10.96□□□□□ -0.66
SRPK1-201ENST00000346162 Q8N9L7 120 aa10.95□□□□□ -0.66
SRPK1-201ENST00000346162 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
SRPK1-201ENST00000346162 IGKV2-24A0A0C4DH68 120 aa10.95□□□□□ -0.66
SRPK1-201ENST00000346162 M0R378 163 aa10.94□□□□□ -0.66
SRPK1-201ENST00000346162 IGLV4-60A0A075B6I1 120 aa10.94□□□□□ -0.66
SRPK1-201ENST00000346162 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
SRPK1-201ENST00000346162 IGLV5-39A0A0G2JS06 123 aa10.93□□□□□ -0.66
SRPK1-201ENST00000346162 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
SRPK1-201ENST00000346162 SYCNQ0VAF6 134 aa10.93□□□□□ -0.66
SRPK1-201ENST00000346162 IGHV4-30-4P0DP06 118 aa10.93□□□□□ -0.66
SRPK1-201ENST00000346162 OXLD1Q5BKU9 147 aa10.92□□□□□ -0.66
SRPK1-201ENST00000346162 LINC00575Q6W349 94 aa10.92□□□□□ -0.66
SRPK1-201ENST00000346162 TM2D3Q9BRN9 247 aa10.92□□□□□ -0.66
SRPK1-201ENST00000346162 C16orf95Q9H693 158 aa10.92□□□□□ -0.66
SRPK1-201ENST00000346162 LITAFQ99732 161 aa10.91□□□□□ -0.66
SRPK1-201ENST00000346162 DHRS4-AS1Q9P1J3 65 aa10.91□□□□□ -0.66
SRPK1-201ENST00000346162 A8MTW9 85 aa10.9□□□□□ -0.67
SRPK1-201ENST00000346162 C9orf116Q5BN46 136 aaPredicted RBP10.9□□□□□ -0.67
SRPK1-201ENST00000346162 PRUNE2Q8WUY3 3088 aa10.89□□□□□ -0.67
SRPK1-201ENST00000346162 FLNBO75369 2602 aaKnown RBP10.88□□□□□ -0.67
SRPK1-201ENST00000346162 COL27A1Q8IZC6 1860 aaPredicted RBP10.88□□□□□ -0.67
SRPK1-201ENST00000346162 MUC4Q99102 2169 aa10.88□□□□□ -0.67
SRPK1-201ENST00000346162 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
SRPK1-201ENST00000346162 UNC80Q8N2C7 3258 aa10.88□□□□□ -0.67
SRPK1-201ENST00000346162 CYSRT1A8MQ03 144 aa10.88□□□□□ -0.67
SRPK1-201ENST00000346162 LIMD2Q9BT23 127 aa10.87□□□□□ -0.67
SRPK1-201ENST00000346162 CD164Q04900 197 aa10.86□□□□□ -0.67
SRPK1-201ENST00000346162 C2orf48Q96LS8 159 aa10.86□□□□□ -0.67
SRPK1-201ENST00000346162 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms