RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 NXT2Q9NPJ8 142 aaKnown RBP10.18□□□□□ -0.78
ATG4B-201ENST00000344376 HSPB8Q9UJY1 196 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
ATG4B-201ENST00000344376 LEPROTL1O95214 131 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 IGLV4-3A0A075B6K6 122 aa10.17□□□□□ -0.78
ATG4B-201ENST00000344376 LOC107984640A0A0U1RRK4 108 aa10.17□□□□□ -0.78
ATG4B-201ENST00000344376 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
ATG4B-201ENST00000344376 Q6ZN92 141 aa10.17□□□□□ -0.78
ATG4B-201ENST00000344376 Q6ZRU5 148 aa10.17□□□□□ -0.78
ATG4B-201ENST00000344376 IGHV3OR16-9A0A0B4J2B5 98 aa10.16□□□□□ -0.78
ATG4B-201ENST00000344376 G0S2P27469 103 aa10.16□□□□□ -0.78
ATG4B-201ENST00000344376 ORAOV1Q8WV07 137 aa10.16□□□□□ -0.78
ATG4B-201ENST00000344376 PAM16Q9Y3D7 125 aa10.15□□□□□ -0.78
ATG4B-201ENST00000344376 HERC1Q15751 4861 aa10.15□□□□□ -0.79
ATG4B-201ENST00000344376 C20orf202A1L168 122 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 F8WDY8 70 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 OXTP01178 125 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 NPSP0C0P6 89 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 PTTG1IPP53801 180 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 PET117Q6UWS5 81 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
ATG4B-201ENST00000344376 SYS1-DBNDD2H3BUS1 97 aa10.13□□□□□ -0.79
ATG4B-201ENST00000344376 PAPPA-AS1Q5QFB9 102 aa10.13□□□□□ -0.79
ATG4B-201ENST00000344376 VCX2Q9H322 139 aa10.13□□□□□ -0.79
ATG4B-201ENST00000344376 UQCR10Q9UDW1 63 aa10.13□□□□□ -0.79
ATG4B-201ENST00000344376 NDUFA1O15239 70 aa10.12□□□□□ -0.79
ATG4B-201ENST00000344376 HBDP02042 147 aa10.12□□□□□ -0.79
ATG4B-201ENST00000344376 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
ATG4B-201ENST00000344376 RNF151Q2KHN1 245 aa10.12□□□□□ -0.79
ATG4B-201ENST00000344376 SPATA45Q537H7 98 aa10.12□□□□□ -0.79
ATG4B-201ENST00000344376 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
ATG4B-201ENST00000344376 A0A087WZ39 114 aa10.11□□□□□ -0.79
ATG4B-201ENST00000344376 DLEU1O43261 78 aa10.11□□□□□ -0.79
ATG4B-201ENST00000344376 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
ATG4B-201ENST00000344376 RPL18AQ02543 176 aaKnown RBP10.11□□□□□ -0.79
ATG4B-201ENST00000344376 UBE2D1P51668 147 aa10.1□□□□□ -0.79
ATG4B-201ENST00000344376 AMELXQ99217 191 aa10.1□□□□□ -0.79
ATG4B-201ENST00000344376 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
ATG4B-201ENST00000344376 A0A096LNJ9 63 aa10.09□□□□□ -0.79
ATG4B-201ENST00000344376 IGIPA6NJ69 53 aa10.09□□□□□ -0.79
ATG4B-201ENST00000344376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-201ENST00000344376 COL5A1-AS1Q5SY13 56 aa10.09□□□□□ -0.79
ATG4B-201ENST00000344376 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
ATG4B-201ENST00000344376 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
ATG4B-201ENST00000344376 LINC01545Q5VT33 79 aa10.08□□□□□ -0.8
ATG4B-201ENST00000344376 LINC00173Q6ZV60 143 aa10.08□□□□□ -0.8
ATG4B-201ENST00000344376 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
ATG4B-201ENST00000344376 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
ATG4B-201ENST00000344376 LINC01549A6NIU2 74 aa10.07□□□□□ -0.8
ATG4B-201ENST00000344376 SEC11AP67812 179 aa10.07□□□□□ -0.8
ATG4B-201ENST00000344376 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
ATG4B-201ENST00000344376 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
ATG4B-201ENST00000344376 PKHD1L1Q86WI1 4243 aa10.07□□□□□ -0.8
ATG4B-201ENST00000344376 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
ATG4B-201ENST00000344376 UNQ6190/PRO20217Q6UXQ8 127 aa10.05□□□□□ -0.8
ATG4B-201ENST00000344376 PRSS2P07478 247 aa10.05□□□□□ -0.8
ATG4B-201ENST00000344376 HERVK_113P63121 156 aa10.05□□□□□ -0.8
ATG4B-201ENST00000344376 C10orf25Q5T742 122 aa10.05□□□□□ -0.8
ATG4B-201ENST00000344376 ERASQ7Z444 233 aa10.05□□□□□ -0.8
ATG4B-201ENST00000344376 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
ATG4B-201ENST00000344376 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
ATG4B-201ENST00000344376 KIAA0087Q14695 138 aa10.04□□□□□ -0.8
ATG4B-201ENST00000344376 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-201ENST00000344376 IFI27L1Q96BM0 104 aa10.04□□□□□ -0.8
ATG4B-201ENST00000344376 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
ATG4B-201ENST00000344376 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
ATG4B-201ENST00000344376 HSBP1L1C9JCN9 74 aa10.03□□□□□ -0.8
ATG4B-201ENST00000344376 ATP5LO75964 103 aa10.03□□□□□ -0.8
ATG4B-201ENST00000344376 TLX1NBP0CAT3 122 aa10.03□□□□□ -0.8
ATG4B-201ENST00000344376 Q6ZRP5 223 aa10.03□□□□□ -0.8
ATG4B-201ENST00000344376 LRP1Q07954 4544 aaKnown RBP10.03□□□□□ -0.8
ATG4B-201ENST00000344376 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
ATG4B-201ENST00000344376 TOMM7Q9P0U1 55 aa10.02□□□□□ -0.81
ATG4B-201ENST00000344376 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.81
ATG4B-201ENST00000344376 CKS1BP61024 79 aa10.01□□□□□ -0.81
ATG4B-201ENST00000344376 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
ATG4B-201ENST00000344376 BATFQ16520 125 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 GAGE2EQ4V326 116 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 C6orf226Q5I0X4 101 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 Q8IZM0 81 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 ATOH7Q8N100 152 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 GAGE2DQ9UEU5 116 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
ATG4B-201ENST00000344376 NDUFC2-KCTD14E9PQ53 114 aa9.98□□□□□ -0.81
ATG4B-201ENST00000344376 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
ATG4B-201ENST00000344376 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
ATG4B-201ENST00000344376 SPINK6Q6UWN8 80 aa9.97□□□□□ -0.81
ATG4B-201ENST00000344376 PMVKQ15126 192 aa9.97□□□□□ -0.81
ATG4B-201ENST00000344376 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
ATG4B-201ENST00000344376 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
ATG4B-201ENST00000344376 H0Y8G0 127 aa9.96□□□□□ -0.82
ATG4B-201ENST00000344376 CXCL5P42830 114 aa9.96□□□□□ -0.82
ATG4B-201ENST00000344376 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
ATG4B-201ENST00000344376 PMCHL2Q9BQD1 86 aa9.96□□□□□ -0.82
ATG4B-201ENST00000344376 TRAV12-1A0A0B4J245 112 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms