RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 PPDPFQ9H3Y8 114 aa13.79□□□□□ -0.2
SEMA6C-201ENST00000341697 PLAC8L1A1L4L8 177 aa13.79□□□□□ -0.2
SEMA6C-201ENST00000341697 C6orf223Q8N319 242 aa13.79□□□□□ -0.2
SEMA6C-201ENST00000341697 F8WDY8 70 aa13.78□□□□□ -0.2
SEMA6C-201ENST00000341697 LST1O00453 97 aa13.77□□□□□ -0.2
SEMA6C-201ENST00000341697 TSPEAR-AS2P59090 65 aa13.77□□□□□ -0.2
SEMA6C-201ENST00000341697 M0QXV9 152 aa13.77□□□□□ -0.2
SEMA6C-201ENST00000341697 CCKP06307 115 aa13.76□□□□□ -0.21
SEMA6C-201ENST00000341697 C1orf134Q5TEV5 83 aa13.76□□□□□ -0.21
SEMA6C-201ENST00000341697 LINC00315P59091 139 aa13.76□□□□□ -0.21
SEMA6C-201ENST00000341697 X6R8D5 127 aa13.76□□□□□ -0.21
SEMA6C-201ENST00000341697 IGLV5-52A0A0A0MRZ9 124 aa13.75□□□□□ -0.21
SEMA6C-201ENST00000341697 C2orf48Q96LS8 159 aa13.75□□□□□ -0.21
SEMA6C-201ENST00000341697 LINC01561Q8N1V8 128 aa13.75□□□□□ -0.21
SEMA6C-201ENST00000341697 SMIM20Q8N5G0 67 aa13.74□□□□□ -0.21
SEMA6C-201ENST00000341697 SBSPONQ8IVN8 264 aa13.73□□□□□ -0.21
SEMA6C-201ENST00000341697 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.73□□□□□ -0.21
SEMA6C-201ENST00000341697 NDUFC2-KCTD14E9PQ53 114 aa13.73□□□□□ -0.21
SEMA6C-201ENST00000341697 PCNTO95613 3336 aa13.73□□□□□ -0.21
SEMA6C-201ENST00000341697 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
SEMA6C-201ENST00000341697 RANBP2P49792 3224 aaKnown RBP13.71□□□□□ -0.21
SEMA6C-201ENST00000341697 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
SEMA6C-201ENST00000341697 TRBV10-3A0A0K0K1G6 114 aa13.71□□□□□ -0.21
SEMA6C-201ENST00000341697 WFDC9Q8NEX5 89 aa13.71□□□□□ -0.21
SEMA6C-201ENST00000341697 ADAMTSL4-AS1Q5T5F5 129 aa13.69□□□□□ -0.22
SEMA6C-201ENST00000341697 NTM-AS1Q6ZSK4 140 aa13.69□□□□□ -0.22
SEMA6C-201ENST00000341697 ESRGQ1W209 222 aa13.68□□□□□ -0.22
SEMA6C-201ENST00000341697 LINC01556Q5JQF7 62 aa13.68□□□□□ -0.22
SEMA6C-201ENST00000341697 RPL28P46779 137 aaKnown RBP13.68□□□□□ -0.22
SEMA6C-201ENST00000341697 H3BNG1 76 aa13.68□□□□□ -0.22
SEMA6C-201ENST00000341697 SS18L2Q9UHA2 77 aa13.68□□□□□ -0.22
SEMA6C-201ENST00000341697 ATP5EP2Q5VTU8 51 aa13.67□□□□□ -0.22
SEMA6C-201ENST00000341697 PRR3P79522 188 aaKnown RBP13.67□□□□□ -0.22
SEMA6C-201ENST00000341697 C3orf84H3BNL1 204 aa13.66□□□□□ -0.22
SEMA6C-201ENST00000341697 REG3GQ6UW15 175 aa13.66□□□□□ -0.22
SEMA6C-201ENST00000341697 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
SEMA6C-201ENST00000341697 SCXQ7RTU7 201 aa13.65□□□□□ -0.22
SEMA6C-201ENST00000341697 MDFIQ99750 246 aa13.65□□□□□ -0.22
SEMA6C-201ENST00000341697 IGLV9-49A0A0B4J1Y8 123 aa13.64□□□□□ -0.23
SEMA6C-201ENST00000341697 SDIM1Q6ZPB5 146 aa13.64□□□□□ -0.23
SEMA6C-201ENST00000341697 NDUFC2O95298 119 aa13.64□□□□□ -0.23
SEMA6C-201ENST00000341697 Q6ZRU5 148 aa13.63□□□□□ -0.23
SEMA6C-201ENST00000341697 CHKB-CPT1BH3BT56 60 aa13.63□□□□□ -0.23
SEMA6C-201ENST00000341697 NDUFV3P56181 108 aaKnown RBP13.63□□□□□ -0.23
SEMA6C-201ENST00000341697 Q8NAQ8 132 aa13.63□□□□□ -0.23
SEMA6C-201ENST00000341697 B5MCH6 92 aa13.61□□□□□ -0.23
SEMA6C-201ENST00000341697 ENHOQ6UWT2 76 aa13.61□□□□□ -0.23
SEMA6C-201ENST00000341697 IGHV3OR16-9A0A0B4J2B5 98 aa13.61□□□□□ -0.23
SEMA6C-201ENST00000341697 IGKV4-1P06312 121 aa13.61□□□□□ -0.23
SEMA6C-201ENST00000341697 HRCT1Q6UXD1 115 aa13.61□□□□□ -0.23
SEMA6C-201ENST00000341697 SPINK6Q6UWN8 80 aa13.6□□□□□ -0.23
SEMA6C-201ENST00000341697 MRPL55Q7Z7F7 128 aaKnown RBP13.59□□□□□ -0.23
SEMA6C-201ENST00000341697 Q8N814 137 aa13.59□□□□□ -0.23
SEMA6C-201ENST00000341697 IGLV5-39A0A0G2JS06 123 aa13.58□□□□□ -0.24
SEMA6C-201ENST00000341697 TMEM258P61165 79 aa13.58□□□□□ -0.24
SEMA6C-201ENST00000341697 KRTAP1-3Q8IUG1 177 aa13.58□□□□□ -0.24
SEMA6C-201ENST00000341697 C10orf25Q5T742 122 aa13.57□□□□□ -0.24
SEMA6C-201ENST00000341697 Q9UF83 564 aa13.57□□□□□ -0.24
SEMA6C-201ENST00000341697 TRANK1O15050 2925 aa13.57□□□□□ -0.24
SEMA6C-201ENST00000341697 MT-ATP8P03928 68 aa13.55□□□□□ -0.24
SEMA6C-201ENST00000341697 MUC4Q99102 2169 aa13.55□□□□□ -0.24
SEMA6C-201ENST00000341697 PRYO14603 147 aa13.55□□□□□ -0.24
SEMA6C-201ENST00000341697 C1orf137Q5JT78 98 aa13.53□□□□□ -0.24
SEMA6C-201ENST00000341697 A0A087WYN8 130 aa13.52□□□□□ -0.25
SEMA6C-201ENST00000341697 A8MTW9 85 aa13.49□□□□□ -0.25
SEMA6C-201ENST00000341697 IGLV5-45A0A087WSX0 123 aa13.48□□□□□ -0.25
SEMA6C-201ENST00000341697 HELZ2Q9BYK8 2649 aaKnown RBP13.48□□□□□ -0.25
SEMA6C-201ENST00000341697 KRTAP10-3P60369 221 aa13.48□□□□□ -0.25
SEMA6C-201ENST00000341697 CSNK1G2-AS1Q8NCQ2 148 aa13.47□□□□□ -0.25
SEMA6C-201ENST00000341697 C22orf24Q9Y442 160 aa13.47□□□□□ -0.25
SEMA6C-201ENST00000341697 MKI67P46013 3256 aaKnown RBP13.46□□□□□ -0.25
SEMA6C-201ENST00000341697 KRTAP1-1Q07627 177 aa13.46□□□□□ -0.25
SEMA6C-201ENST00000341697 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
SEMA6C-201ENST00000341697 LINC00337Q8N6G1 96 aa13.46□□□□□ -0.26
SEMA6C-201ENST00000341697 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
SEMA6C-201ENST00000341697 WFDC13Q8IUB5 93 aa13.44□□□□□ -0.26
SEMA6C-201ENST00000341697 KRTAP10-11P60412 298 aa13.44□□□□□ -0.26
SEMA6C-201ENST00000341697 Q6JHZ5 121 aa13.44□□□□□ -0.26
SEMA6C-201ENST00000341697 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
SEMA6C-201ENST00000341697 C20orf197Q8N268 126 aa13.43□□□□□ -0.26
SEMA6C-201ENST00000341697 Q9BRP9 147 aa13.43□□□□□ -0.26
SEMA6C-201ENST00000341697 C6orf48Q9UBA6 75 aa13.43□□□□□ -0.26
SEMA6C-201ENST00000341697 NBDYA0A0U1RRE5 68 aa13.42□□□□□ -0.26
SEMA6C-201ENST00000341697 LINC00575Q6W349 94 aa13.42□□□□□ -0.26
SEMA6C-201ENST00000341697 Q8N3U1 123 aa13.42□□□□□ -0.26
SEMA6C-201ENST00000341697 K7EIL1 84 aa13.41□□□□□ -0.26
SEMA6C-201ENST00000341697 IMUPQ9GZP8 106 aa13.41□□□□□ -0.26
SEMA6C-201ENST00000341697 FLNAP21333 2647 aaKnown RBP13.4□□□□□ -0.26
SEMA6C-201ENST00000341697 WWC2-AS2Q96NR7 200 aa13.4□□□□□ -0.26
SEMA6C-201ENST00000341697 C19orf73Q9NVV2 129 aa13.4□□□□□ -0.26
SEMA6C-201ENST00000341697 ZNF292O60281 2723 aa13.4□□□□□ -0.26
SEMA6C-201ENST00000341697 PRLHP81277 87 aa13.39□□□□□ -0.27
SEMA6C-201ENST00000341697 CASC2Q6XLA1 102 aa13.39□□□□□ -0.27
SEMA6C-201ENST00000341697 UQCRQO14949 82 aa13.38□□□□□ -0.27
SEMA6C-201ENST00000341697 FAM240AA0A1B0GVK7 77 aa13.37□□□□□ -0.27
SEMA6C-201ENST00000341697 C5orf47Q569G3 176 aa13.36□□□□□ -0.27
SEMA6C-201ENST00000341697 ITPR3Q14573 2671 aa13.36□□□□□ -0.27
SEMA6C-201ENST00000341697 SMCR5Q8TEV8 140 aa13.34□□□□□ -0.27
SEMA6C-201ENST00000341697 LINC00167Q96N53 147 aa13.34□□□□□ -0.27
SEMA6C-201ENST00000341697 DNAH10OSP0CZ25 163 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms