RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 COX7A2LO14548 114 aa15.21■□□□□ 0.03
PDLIM2-203ENST00000339162 PRR34Q9NV39 138 aa15.21■□□□□ 0.03
PDLIM2-203ENST00000339162 UBE2WQ96B02 151 aa15.2■□□□□ 0.02
PDLIM2-203ENST00000339162 PRO1854Q9UHT4 67 aa15.2■□□□□ 0.02
PDLIM2-203ENST00000339162 F8W1H4 67 aa15.2■□□□□ 0.02
PDLIM2-203ENST00000339162 FOXI1Q12951 378 aa15.2■□□□□ 0.02
PDLIM2-203ENST00000339162 STAB2Q8WWQ8 2551 aa15.19■□□□□ 0.02
PDLIM2-203ENST00000339162 GAGE12HA6NDE8 117 aa15.19■□□□□ 0.02
PDLIM2-203ENST00000339162 H7C2G1 150 aa15.19■□□□□ 0.02
PDLIM2-203ENST00000339162 C2orf82Q6UX34 121 aa15.19■□□□□ 0.02
PDLIM2-203ENST00000339162 LINC00308Q8TCZ7 52 aa15.19■□□□□ 0.02
PDLIM2-203ENST00000339162 MALP21145 153 aa15.19■□□□□ 0.02
PDLIM2-203ENST00000339162 SOSTDC1Q6X4U4 206 aa15.18■□□□□ 0.02
PDLIM2-203ENST00000339162 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-203ENST00000339162 CRPP02741 224 aa15.17■□□□□ 0.02
PDLIM2-203ENST00000339162 IFITM1P13164 125 aa15.16■□□□□ 0.02
PDLIM2-203ENST00000339162 A0A0B4J2C4 111 aa15.16■□□□□ 0.02
PDLIM2-203ENST00000339162 LOC107984156A0A0G2JMH3 177 aa15.15■□□□□ 0.02
PDLIM2-203ENST00000339162 PFN2P35080 140 aa15.15■□□□□ 0.02
PDLIM2-203ENST00000339162 ARL17AQ8IVW1 177 aa15.15■□□□□ 0.02
PDLIM2-203ENST00000339162 Q8IZM0 81 aa15.15■□□□□ 0.02
PDLIM2-203ENST00000339162 LINC00158P58513 81 aa15.14■□□□□ 0.01
PDLIM2-203ENST00000339162 MIR7-3HGQ8N6C7 128 aa15.14■□□□□ 0.01
PDLIM2-203ENST00000339162 H3BMG7 143 aa15.13■□□□□ 0.01
PDLIM2-203ENST00000339162 LINC01561Q8N1V8 128 aa15.13■□□□□ 0.01
PDLIM2-203ENST00000339162 WFDC2Q14508 124 aa15.13■□□□□ 0.01
PDLIM2-203ENST00000339162 KIAA0087Q14695 138 aa15.13■□□□□ 0.01
PDLIM2-203ENST00000339162 DNAH9Q9NYC9 4486 aa15.13■□□□□ 0.01
PDLIM2-203ENST00000339162 LINC00526Q96FQ7 95 aa15.12■□□□□ 0.01
PDLIM2-203ENST00000339162 ERG28Q9UKR5 140 aa15.12■□□□□ 0.01
PDLIM2-203ENST00000339162 CKS1BP61024 79 aa15.11■□□□□ 0.01
PDLIM2-203ENST00000339162 Q1RN00 199 aa15.11■□□□□ 0.01
PDLIM2-203ENST00000339162 C15orf53Q8NAA6 179 aa15.1■□□□□ 0.01
PDLIM2-203ENST00000339162 CFAP161Q6P656 301 aa15.09■□□□□ 0.01
PDLIM2-203ENST00000339162 B9D2Q9BPU9 175 aa15.09■□□□□ 0.01
PDLIM2-203ENST00000339162 PRO0461Q9UI25 63 aa15.09■□□□□ 0.01
PDLIM2-203ENST00000339162 IBA57-AS1B1ANH7 110 aa15.09■□□□□ 0.01
PDLIM2-203ENST00000339162 C6orf223Q8N319 242 aa15.09■□□□□ 0.01
PDLIM2-203ENST00000339162 LINC00588Q9Y4M8 146 aa15.09■□□□□ 0.01
PDLIM2-203ENST00000339162 LINC01556Q5JQF7 62 aa15.08■□□□□ 0
PDLIM2-203ENST00000339162 DNHD1Q96M86 4753 aa15.07■□□□□ 0
PDLIM2-203ENST00000339162 TRAV8-4A0A0B4J246 113 aa15.07■□□□□ 0
PDLIM2-203ENST00000339162 PSMB2P49721 201 aa15.07■□□□□ 0
PDLIM2-203ENST00000339162 J3QR89 54 aa15.07■□□□□ 0
PDLIM2-203ENST00000339162 C9orf116Q5BN46 136 aaPredicted RBP15.06■□□□□ 0
PDLIM2-203ENST00000339162 SCGB1C2P0DMR2 95 aa15.05■□□□□ 0
PDLIM2-203ENST00000339162 SPAG11BQ08648 103 aa15.05■□□□□ 0
PDLIM2-203ENST00000339162 MTURNQ8N3F0 131 aa15.05■□□□□ 0
PDLIM2-203ENST00000339162 RPL13AP40429 203 aaKnown RBP15.04■□□□□ -0
PDLIM2-203ENST00000339162 ETDBQ3ZM63 59 aa15.04■□□□□ -0
PDLIM2-203ENST00000339162 COPS9Q8WXC6 57 aa15.04■□□□□ -0
PDLIM2-203ENST00000339162 KLK5Q9Y337 293 aaPredicted RBP15.04■□□□□ -0
PDLIM2-203ENST00000339162 C10orf25Q5T742 122 aa15.03■□□□□ -0
PDLIM2-203ENST00000339162 KRTAP26-1Q6PEX3 210 aa15.03■□□□□ -0
PDLIM2-203ENST00000339162 CCL18P55774 89 aa15.02■□□□□ -0
PDLIM2-203ENST00000339162 UNQ6190/PRO20217Q6UXQ8 127 aa15.02□□□□□ -0.01
PDLIM2-203ENST00000339162 Q9HAA7 133 aa15.02□□□□□ -0.01
PDLIM2-203ENST00000339162 TCL1BO95988 128 aa15.01□□□□□ -0.01
PDLIM2-203ENST00000339162 DNAH10OSP0CZ25 163 aa15.01□□□□□ -0.01
PDLIM2-203ENST00000339162 SND1-IT1Q9HBX3 110 aa15.01□□□□□ -0.01
PDLIM2-203ENST00000339162 TRIAP1O43715 76 aa15.01□□□□□ -0.01
PDLIM2-203ENST00000339162 CXCL5P42830 114 aa15.01□□□□□ -0.01
PDLIM2-203ENST00000339162 IGKV2D-24A0A075B6R9 120 aa15□□□□□ -0.01
PDLIM2-203ENST00000339162 HIGD2BQ4VC39 106 aa14.99□□□□□ -0.01
PDLIM2-203ENST00000339162 C1orf43Q9BWL3 253 aa14.99□□□□□ -0.01
PDLIM2-203ENST00000339162 SIGMAR1Q99720 223 aa14.98□□□□□ -0.01
PDLIM2-203ENST00000339162 MEGF8Q7Z7M0 2845 aa14.98□□□□□ -0.01
PDLIM2-203ENST00000339162 LYRM7Q5U5X0 104 aa14.97□□□□□ -0.01
PDLIM2-203ENST00000339162 IGKV2-28A0A075B6P5 120 aa14.96□□□□□ -0.01
PDLIM2-203ENST00000339162 IGKV2D-28P01615 120 aa14.96□□□□□ -0.01
PDLIM2-203ENST00000339162 LYSTQ99698 3801 aa14.96□□□□□ -0.01
PDLIM2-203ENST00000339162 TRBV30A0A0K0K1B3 111 aa14.96□□□□□ -0.02
PDLIM2-203ENST00000339162 SCGB1A1P11684 91 aa14.95□□□□□ -0.02
PDLIM2-203ENST00000339162 SMCPP49901 116 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-203ENST00000339162 LINC00337Q8N6G1 96 aa14.94□□□□□ -0.02
PDLIM2-203ENST00000339162 PPDPFQ9H3Y8 114 aa14.94□□□□□ -0.02
PDLIM2-203ENST00000339162 NTN5Q8WTR8 489 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-203ENST00000339162 PRKDCP78527 4128 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-203ENST00000339162 C15orf56Q8N910 161 aa14.93□□□□□ -0.02
PDLIM2-203ENST00000339162 TRBV20-1A0A075B6N2 111 aa14.92□□□□□ -0.02
PDLIM2-203ENST00000339162 COX17Q14061 63 aa14.92□□□□□ -0.02
PDLIM2-203ENST00000339162 ZNF561-AS1K7EIQ3 104 aa14.92□□□□□ -0.02
PDLIM2-203ENST00000339162 CSMD3Q7Z407 3707 aa14.91□□□□□ -0.02
PDLIM2-203ENST00000339162 PRR3P79522 188 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-203ENST00000339162 C6orf48Q9UBA6 75 aa14.9□□□□□ -0.02
PDLIM2-203ENST00000339162 TENM2Q9NT68 2774 aa14.9□□□□□ -0.02
PDLIM2-203ENST00000339162 CLEC2BQ92478 149 aa14.89□□□□□ -0.03
PDLIM2-203ENST00000339162 CAMK2N2Q96S95 79 aa14.88□□□□□ -0.03
PDLIM2-203ENST00000339162 UPK3BQ9BT76 320 aa14.88□□□□□ -0.03
PDLIM2-203ENST00000339162 TRAV13-2A0A0B4J235 113 aa14.88□□□□□ -0.03
PDLIM2-203ENST00000339162 COX6CP09669 75 aa14.88□□□□□ -0.03
PDLIM2-203ENST00000339162 NHLRC4P0CG21 123 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-203ENST00000339162 APLNQ9ULZ1 77 aa14.87□□□□□ -0.03
PDLIM2-203ENST00000339162 CASC10Q5T4H9 136 aa14.86□□□□□ -0.03
PDLIM2-203ENST00000339162 Q8NDZ9 215 aa14.85□□□□□ -0.03
PDLIM2-203ENST00000339162 OR13C6PQ8NH95 151 aa14.85□□□□□ -0.03
PDLIM2-203ENST00000339162 ATXN8Q156A1 80 aa14.84□□□□□ -0.03
PDLIM2-203ENST00000339162 Q6ZRU5 148 aa14.84□□□□□ -0.03
PDLIM2-203ENST00000339162 C9JAW5 83 aa14.83□□□□□ -0.04
PDLIM2-203ENST00000339162 TEN1Q86WV5 123 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms