RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 C10orf99Q6UWK7 81 aa8.85□□□□□ -0.99
FN1-202ENST00000336916 IGIPA6NJ69 53 aa8.85□□□□□ -0.99
FN1-202ENST00000336916 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
FN1-202ENST00000336916 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
FN1-202ENST00000336916 Q8N814 137 aa8.84□□□□□ -0.99
FN1-202ENST00000336916 PROK1P58294 105 aa8.84□□□□□ -0.99
FN1-202ENST00000336916 A0A1B0GW54 56 aa8.84□□□□□ -0.99
FN1-202ENST00000336916 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
FN1-202ENST00000336916 PRB2P02812 416 aaPredicted RBP8.84□□□□□ -0.99
FN1-202ENST00000336916 KMT2BQ9UMN6 2715 aaPredicted RBP8.84□□□□□ -0.99
FN1-202ENST00000336916 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
FN1-202ENST00000336916 C1orf137Q5JT78 98 aa8.83□□□□□ -1
FN1-202ENST00000336916 A6NED7 52 aa8.83□□□□□ -1
FN1-202ENST00000336916 CR1P17927 2039 aa8.83□□□□□ -1
FN1-202ENST00000336916 AKAP13Q12802 2813 aa8.83□□□□□ -1
FN1-202ENST00000336916 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
FN1-202ENST00000336916 C18orf65Q6ZTR6 163 aa8.83□□□□□ -1
FN1-202ENST00000336916 NTM-AS1Q6ZSK4 140 aa8.83□□□□□ -1
FN1-202ENST00000336916 SLPIP03973 132 aa8.82□□□□□ -1
FN1-202ENST00000336916 CFAP46Q8IYW2 2715 aa8.82□□□□□ -1
FN1-202ENST00000336916 H3BNG1 76 aa8.82□□□□□ -1
FN1-202ENST00000336916 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
FN1-202ENST00000336916 FHL2Q14192 279 aa8.81□□□□□ -1
FN1-202ENST00000336916 Q6Q795 121 aa8.81□□□□□ -1
FN1-202ENST00000336916 PRR9Q5T870 116 aa8.8□□□□□ -1
FN1-202ENST00000336916 FLNBO75369 2602 aaKnown RBP8.8□□□□□ -1
FN1-202ENST00000336916 MAST4O15021 2626 aa8.8□□□□□ -1
FN1-202ENST00000336916 LINC00242Q5T6M2 205 aa8.8□□□□□ -1
FN1-202ENST00000336916 PPDPFQ9H3Y8 114 aa8.8□□□□□ -1
FN1-202ENST00000336916 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
FN1-202ENST00000336916 AMELXQ99217 191 aa8.79□□□□□ -1
FN1-202ENST00000336916 MAPKAPK5-AS1Q8N8E1 139 aa8.79□□□□□ -1
FN1-202ENST00000336916 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
FN1-202ENST00000336916 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
FN1-202ENST00000336916 ESRGQ1W209 222 aa8.79□□□□□ -1
FN1-202ENST00000336916 HELZ2Q9BYK8 2649 aaKnown RBP8.79□□□□□ -1
FN1-202ENST00000336916 COX7CP15954 63 aa8.79□□□□□ -1
FN1-202ENST00000336916 Q6ZS46 218 aa8.79□□□□□ -1
FN1-202ENST00000336916 YPEL4Q96NS1 127 aa8.79□□□□□ -1
FN1-202ENST00000336916 FHL3Q13643 280 aa8.78□□□□□ -1
FN1-202ENST00000336916 Q6ZTC4 211 aa8.78□□□□□ -1
FN1-202ENST00000336916 HECTD1Q9ULT8 2610 aa8.78□□□□□ -1
FN1-202ENST00000336916 MPLKIPQ8TAP9 179 aa8.77□□□□□ -1
FN1-202ENST00000336916 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
FN1-202ENST00000336916 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
FN1-202ENST00000336916 GOLGB1Q14789 3259 aaKnown RBP8.76□□□□□ -1.01
FN1-202ENST00000336916 DNAH12Q6ZR08 3092 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 LINC01556Q5JQF7 62 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 C2orf91Q6ZV80 131 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 Q9BRP9 147 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
FN1-202ENST00000336916 FLNAP21333 2647 aaKnown RBP8.76□□□□□ -1.01
FN1-202ENST00000336916 TP53AIP1Q9HCN2 124 aa8.75□□□□□ -1.01
FN1-202ENST00000336916 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
FN1-202ENST00000336916 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
FN1-202ENST00000336916 LINC00337Q8N6G1 96 aa8.75□□□□□ -1.01
FN1-202ENST00000336916 AVPP01185 164 aa8.75□□□□□ -1.01
FN1-202ENST00000336916 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
FN1-202ENST00000336916 CXCL6P80162 114 aa8.74□□□□□ -1.01
FN1-202ENST00000336916 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
FN1-202ENST00000336916 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
FN1-202ENST00000336916 CDSNQ15517 529 aa8.72□□□□□ -1.01
FN1-202ENST00000336916 ITPR3Q14573 2671 aa8.72□□□□□ -1.01
FN1-202ENST00000336916 hDV103S1A0JD37 113 aa8.71□□□□□ -1.01
FN1-202ENST00000336916 SMR3AQ99954 134 aa8.71□□□□□ -1.01
FN1-202ENST00000336916 LINC00526Q96FQ7 95 aa8.71□□□□□ -1.02
FN1-202ENST00000336916 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
FN1-202ENST00000336916 MGAM2Q2M2H8 2515 aa8.7□□□□□ -1.02
FN1-202ENST00000336916 SMIM26A0A096LP01 95 aa8.7□□□□□ -1.02
FN1-202ENST00000336916 COX6A2Q02221 97 aa8.69□□□□□ -1.02
FN1-202ENST00000336916 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
FN1-202ENST00000336916 CENPEQ02224 2701 aa8.68□□□□□ -1.02
FN1-202ENST00000336916 LINC01547P58512 204 aaPredicted RBP8.68□□□□□ -1.02
FN1-202ENST00000336916 IGHV6-1A0A0B4J1U7 121 aa8.68□□□□□ -1.02
FN1-202ENST00000336916 EDN2P20800 178 aa8.68□□□□□ -1.02
FN1-202ENST00000336916 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
FN1-202ENST00000336916 A8MZ25 164 aa8.66□□□□□ -1.02
FN1-202ENST00000336916 IGLV4-60A0A075B6I1 120 aa8.66□□□□□ -1.02
FN1-202ENST00000336916 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
FN1-202ENST00000336916 LINC00575Q6W349 94 aa8.66□□□□□ -1.02
FN1-202ENST00000336916 RETNQ9HD89 108 aa8.65□□□□□ -1.02
FN1-202ENST00000336916 KRTAP10-9P60411 292 aa8.65□□□□□ -1.02
FN1-202ENST00000336916 H0Y9P7 68 aa8.65□□□□□ -1.02
FN1-202ENST00000336916 LINC00208Q96KT6 92 aa8.65□□□□□ -1.03
FN1-202ENST00000336916 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.03
FN1-202ENST00000336916 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
FN1-202ENST00000336916 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
FN1-202ENST00000336916 C9orf116Q5BN46 136 aaPredicted RBP8.63□□□□□ -1.03
FN1-202ENST00000336916 ATRQ13535 2644 aa8.63□□□□□ -1.03
FN1-202ENST00000336916 PRM2P04554 102 aa8.63□□□□□ -1.03
FN1-202ENST00000336916 MDFIQ99750 246 aa8.63□□□□□ -1.03
FN1-202ENST00000336916 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
FN1-202ENST00000336916 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
FN1-202ENST00000336916 Q8N3U1 123 aa8.6□□□□□ -1.03
FN1-202ENST00000336916 Q6ZRP5 223 aa8.6□□□□□ -1.03
FN1-202ENST00000336916 H3BPC8 53 aa8.6□□□□□ -1.03
FN1-202ENST00000336916 BCE1O60756 84 aa8.6□□□□□ -1.03
FN1-202ENST00000336916 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms