RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NPC2P61916 151 aa13.96□□□□□ -0.17
RIPPLY3-201ENST00000329553 C11orf45Q8TAV5 145 aa13.96□□□□□ -0.17
RIPPLY3-201ENST00000329553 TRBV10-2A0A0K0K1G8 114 aa13.94□□□□□ -0.18
RIPPLY3-201ENST00000329553 XGP55808 180 aa13.94□□□□□ -0.18
RIPPLY3-201ENST00000329553 MT-ATP8P03928 68 aa13.93□□□□□ -0.18
RIPPLY3-201ENST00000329553 SMIM1B2RUZ4 78 aa13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 H3BNG1 76 aa13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 CIRBPQ14011 172 aaKnown RBP13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 DAND5Q8N907 189 aa13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 HUWE1Q7Z6Z7 4374 aaKnown RBP13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 LELP1Q5T871 98 aa13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 Q8N3U1 123 aa13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 Q9H8V8 135 aa13.92□□□□□ -0.18
RIPPLY3-201ENST00000329553 COX6CP09669 75 aa13.91□□□□□ -0.18
RIPPLY3-201ENST00000329553 LYPD5Q6UWN5 251 aa13.91□□□□□ -0.18
RIPPLY3-201ENST00000329553 LINC00959A0A1B0GUT2 108 aa13.9□□□□□ -0.18
RIPPLY3-201ENST00000329553 NTN5Q8WTR8 489 aaPredicted RBP13.9□□□□□ -0.18
RIPPLY3-201ENST00000329553 DEFB131BA0A096LNP1 70 aa13.9□□□□□ -0.18
RIPPLY3-201ENST00000329553 RPL13AP40429 203 aaKnown RBP13.9□□□□□ -0.18
RIPPLY3-201ENST00000329553 LINC00308Q8TCZ7 52 aa13.89□□□□□ -0.19
RIPPLY3-201ENST00000329553 CLPSL2Q6UWE3 100 aa13.88□□□□□ -0.19
RIPPLY3-201ENST00000329553 ZNF625Q96I27 306 aaPredicted RBP13.88□□□□□ -0.19
RIPPLY3-201ENST00000329553 IGHV3OR16-9A0A0B4J2B5 98 aa13.87□□□□□ -0.19
RIPPLY3-201ENST00000329553 A0A1B0GV72 72 aa13.87□□□□□ -0.19
RIPPLY3-201ENST00000329553 LST1O00453 97 aa13.87□□□□□ -0.19
RIPPLY3-201ENST00000329553 LINC00269Q8N2A0 174 aa13.87□□□□□ -0.19
RIPPLY3-201ENST00000329553 CLEC2BQ92478 149 aa13.86□□□□□ -0.19
RIPPLY3-201ENST00000329553 TEX49A0A1B0GTD5 131 aa13.85□□□□□ -0.19
RIPPLY3-201ENST00000329553 H3BT86 120 aa13.85□□□□□ -0.19
RIPPLY3-201ENST00000329553 ANGP03950 147 aaKnown RBP13.85□□□□□ -0.19
RIPPLY3-201ENST00000329553 C2orf82Q6UX34 121 aa13.84□□□□□ -0.19
RIPPLY3-201ENST00000329553 SS18Q15532 418 aa13.84□□□□□ -0.19
RIPPLY3-201ENST00000329553 COPS9Q8WXC6 57 aa13.84□□□□□ -0.19
RIPPLY3-201ENST00000329553 SOSTDC1Q6X4U4 206 aa13.83□□□□□ -0.2
RIPPLY3-201ENST00000329553 CKS1BP61024 79 aa13.83□□□□□ -0.2
RIPPLY3-201ENST00000329553 HERV-K104P63124 156 aa13.83□□□□□ -0.2
RIPPLY3-201ENST00000329553 C5orf38Q86SI9 138 aa13.83□□□□□ -0.2
RIPPLY3-201ENST00000329553 UBE2WQ96B02 151 aa13.83□□□□□ -0.2
RIPPLY3-201ENST00000329553 XCL1P47992 114 aa13.82□□□□□ -0.2
RIPPLY3-201ENST00000329553 REG3AQ06141 175 aa13.82□□□□□ -0.2
RIPPLY3-201ENST00000329553 A0A087WZ39 114 aa13.81□□□□□ -0.2
RIPPLY3-201ENST00000329553 A0A0U1RRA0 63 aa13.81□□□□□ -0.2
RIPPLY3-201ENST00000329553 ESRGQ1W209 222 aa13.81□□□□□ -0.2
RIPPLY3-201ENST00000329553 PPDPFQ9H3Y8 114 aa13.81□□□□□ -0.2
RIPPLY3-201ENST00000329553 TRAV10A0A0B4J240 114 aa13.8□□□□□ -0.2
RIPPLY3-201ENST00000329553 MEIG1Q5JSS6 88 aa13.8□□□□□ -0.2
RIPPLY3-201ENST00000329553 WFDC10BQ8IUB3 73 aa13.78□□□□□ -0.2
RIPPLY3-201ENST00000329553 DNAH9Q9NYC9 4486 aa13.78□□□□□ -0.2
RIPPLY3-201ENST00000329553 IGLV10-54A0A075B6I4 117 aa13.78□□□□□ -0.2
RIPPLY3-201ENST00000329553 KLK12Q9UKR0 248 aa13.78□□□□□ -0.2
RIPPLY3-201ENST00000329553 TRAV8-4A0A0B4J246 113 aa13.77□□□□□ -0.21
RIPPLY3-201ENST00000329553 CHCHD10Q8WYQ3 142 aaPredicted RBP13.77□□□□□ -0.21
RIPPLY3-201ENST00000329553 COX7B2Q8TF08 81 aa13.76□□□□□ -0.21
RIPPLY3-201ENST00000329553 TOMM7Q9P0U1 55 aa13.76□□□□□ -0.21
RIPPLY3-201ENST00000329553 COX7A2LO14548 114 aa13.76□□□□□ -0.21
RIPPLY3-201ENST00000329553 PRR34Q9NV39 138 aa13.75□□□□□ -0.21
RIPPLY3-201ENST00000329553 CD164L2Q6UWJ8 174 aa13.75□□□□□ -0.21
RIPPLY3-201ENST00000329553 B9D2Q9BPU9 175 aa13.75□□□□□ -0.21
RIPPLY3-201ENST00000329553 ENHOQ6UWT2 76 aa13.74□□□□□ -0.21
RIPPLY3-201ENST00000329553 COL7A1Q02388 2944 aa13.72□□□□□ -0.21
RIPPLY3-201ENST00000329553 C15orf53Q8NAA6 179 aa13.71□□□□□ -0.21
RIPPLY3-201ENST00000329553 LINC01561Q8N1V8 128 aa13.71□□□□□ -0.22
RIPPLY3-201ENST00000329553 SNCGO76070 127 aa13.7□□□□□ -0.22
RIPPLY3-201ENST00000329553 FAM240AA0A1B0GVK7 77 aa13.7□□□□□ -0.22
RIPPLY3-201ENST00000329553 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
RIPPLY3-201ENST00000329553 TRACP01848 142 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 MIR7-3HGQ8N6C7 128 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 CRPP02741 224 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 GAGE2BQ13066 116 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 GAGE2EQ4V326 116 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 GAGE2DQ9UEU5 116 aa13.67□□□□□ -0.22
RIPPLY3-201ENST00000329553 TRAV13-2A0A0B4J235 113 aa13.66□□□□□ -0.22
RIPPLY3-201ENST00000329553 Q6Q795 121 aa13.66□□□□□ -0.22
RIPPLY3-201ENST00000329553 MALP21145 153 aa13.66□□□□□ -0.22
RIPPLY3-201ENST00000329553 Q8IZM0 81 aa13.66□□□□□ -0.22
RIPPLY3-201ENST00000329553 LINC01556Q5JQF7 62 aa13.65□□□□□ -0.22
RIPPLY3-201ENST00000329553 RPL28P46779 137 aaKnown RBP13.64□□□□□ -0.23
RIPPLY3-201ENST00000329553 LINC00588Q9Y4M8 146 aa13.64□□□□□ -0.23
RIPPLY3-201ENST00000329553 IGKV2-28A0A075B6P5 120 aa13.64□□□□□ -0.23
RIPPLY3-201ENST00000329553 IGKV2D-28P01615 120 aa13.64□□□□□ -0.23
RIPPLY3-201ENST00000329553 KIAA0087Q14695 138 aa13.64□□□□□ -0.23
RIPPLY3-201ENST00000329553 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
RIPPLY3-201ENST00000329553 FAM218AQ96MZ4 157 aa13.63□□□□□ -0.23
RIPPLY3-201ENST00000329553 SND1-IT1Q9HBX3 110 aa13.63□□□□□ -0.23
RIPPLY3-201ENST00000329553 IBA57-AS1B1ANH7 110 aa13.62□□□□□ -0.23
RIPPLY3-201ENST00000329553 ANAPC13Q9BS18 74 aa13.62□□□□□ -0.23
RIPPLY3-201ENST00000329553 STAB2Q8WWQ8 2551 aa13.61□□□□□ -0.23
RIPPLY3-201ENST00000329553 LINC00158P58513 81 aa13.61□□□□□ -0.23
RIPPLY3-201ENST00000329553 DNAH10OSP0CZ25 163 aa13.6□□□□□ -0.23
RIPPLY3-201ENST00000329553 CCL18P55774 89 aa13.6□□□□□ -0.23
RIPPLY3-201ENST00000329553 KLK5Q9Y337 293 aaPredicted RBP13.59□□□□□ -0.23
RIPPLY3-201ENST00000329553 C22orf24Q9Y442 160 aa13.59□□□□□ -0.23
RIPPLY3-201ENST00000329553 BAALC-AS2P0C853 105 aa13.59□□□□□ -0.23
RIPPLY3-201ENST00000329553 NHLRC4P0CG21 123 aaPredicted RBP13.59□□□□□ -0.23
RIPPLY3-201ENST00000329553 KRTAP26-1Q6PEX3 210 aa13.59□□□□□ -0.23
RIPPLY3-201ENST00000329553 TTC32Q5I0X7 151 aa13.58□□□□□ -0.24
RIPPLY3-201ENST00000329553 CFAP161Q6P656 301 aa13.58□□□□□ -0.24
RIPPLY3-201ENST00000329553 NDUFV3P56181 108 aaKnown RBP13.58□□□□□ -0.24
RIPPLY3-201ENST00000329553 ACYP1P07311 99 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms