RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 ALKBH7Q9BT30 221 aaPredicted RBP12.72□□□□□ -0.37
ME3-201ENST00000323418 IGLV1-50A0A075B6I6 118 aa12.71□□□□□ -0.37
ME3-201ENST00000323418 CKS1BP61024 79 aa12.71□□□□□ -0.37
ME3-201ENST00000323418 SEC11AP67812 179 aa12.71□□□□□ -0.37
ME3-201ENST00000323418 TRAV9-1A0A075B6T8 112 aa12.7□□□□□ -0.38
ME3-201ENST00000323418 LINC01546A6NGU7 62 aa12.7□□□□□ -0.38
ME3-201ENST00000323418 PAPPA-AS1Q5QFB9 102 aa12.7□□□□□ -0.38
ME3-201ENST00000323418 ERASQ7Z444 233 aa12.7□□□□□ -0.38
ME3-201ENST00000323418 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
ME3-201ENST00000323418 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
ME3-201ENST00000323418 SMIM1B2RUZ4 78 aa12.69□□□□□ -0.38
ME3-201ENST00000323418 F8VRH5 84 aa12.69□□□□□ -0.38
ME3-201ENST00000323418 G0S2P27469 103 aa12.69□□□□□ -0.38
ME3-201ENST00000323418 IGLV5-45A0A087WSX0 123 aa12.68□□□□□ -0.38
ME3-201ENST00000323418 TMEM218A2RU14 115 aa12.68□□□□□ -0.38
ME3-201ENST00000323418 IFITM2Q01629 132 aa12.68□□□□□ -0.38
ME3-201ENST00000323418 UQCC3Q6UW78 93 aa12.68□□□□□ -0.38
ME3-201ENST00000323418 GEMIN7Q9H840 131 aaKnown RBP12.68□□□□□ -0.38
ME3-201ENST00000323418 CXCL5P42830 114 aa12.66□□□□□ -0.38
ME3-201ENST00000323418 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
ME3-201ENST00000323418 ZNF861PO60384 105 aa12.65□□□□□ -0.38
ME3-201ENST00000323418 SCGB3A1Q96QR1 104 aa12.65□□□□□ -0.38
ME3-201ENST00000323418 GNB1LQ9BYB4 327 aa12.65□□□□□ -0.38
ME3-201ENST00000323418 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.38
ME3-201ENST00000323418 NUPR1O60356 82 aa12.64□□□□□ -0.39
ME3-201ENST00000323418 PDZD11Q5EBL8 140 aa12.63□□□□□ -0.39
ME3-201ENST00000323418 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
ME3-201ENST00000323418 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
ME3-201ENST00000323418 MRPL55Q7Z7F7 128 aaKnown RBP12.61□□□□□ -0.39
ME3-201ENST00000323418 COX7B2Q8TF08 81 aa12.61□□□□□ -0.39
ME3-201ENST00000323418 CST9LQ9H4G1 147 aa12.61□□□□□ -0.39
ME3-201ENST00000323418 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
ME3-201ENST00000323418 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
ME3-201ENST00000323418 RPL13AP40429 203 aaKnown RBP12.6□□□□□ -0.39
ME3-201ENST00000323418 SPINK8P0C7L1 97 aa12.58□□□□□ -0.4
ME3-201ENST00000323418 IGLV5-37A0A075B6J1 123 aa12.57□□□□□ -0.4
ME3-201ENST00000323418 A0A096LNJ9 63 aa12.57□□□□□ -0.4
ME3-201ENST00000323418 PMVKQ15126 192 aa12.57□□□□□ -0.4
ME3-201ENST00000323418 LINC00167Q96N53 147 aa12.57□□□□□ -0.4
ME3-201ENST00000323418 BCE1O60756 84 aa12.56□□□□□ -0.4
ME3-201ENST00000323418 S100PP25815 95 aa12.56□□□□□ -0.4
ME3-201ENST00000323418 C10orf91Q5T1B1 145 aa12.56□□□□□ -0.4
ME3-201ENST00000323418 MRPL18Q9H0U6 180 aaKnown RBP12.56□□□□□ -0.4
ME3-201ENST00000323418 COX19Q49B96 90 aa12.55□□□□□ -0.4
ME3-201ENST00000323418 URB1-AS1Q96HZ7 61 aa12.54□□□□□ -0.4
ME3-201ENST00000323418 A0A087X002 238 aa12.53□□□□□ -0.4
ME3-201ENST00000323418 FA2HQ7L5A8 372 aa12.53□□□□□ -0.4
ME3-201ENST00000323418 KRTAP13-1Q8IUC0 172 aa12.53□□□□□ -0.4
ME3-201ENST00000323418 IGLV5-39A0A0G2JS06 123 aa12.52□□□□□ -0.41
ME3-201ENST00000323418 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
ME3-201ENST00000323418 IGLC3P0DOY3 106 aa12.52□□□□□ -0.41
ME3-201ENST00000323418 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
ME3-201ENST00000323418 FABP9Q0Z7S8 132 aa12.51□□□□□ -0.41
ME3-201ENST00000323418 COMMD7Q86VX2 200 aa12.51□□□□□ -0.41
ME3-201ENST00000323418 SMCO4Q9NRQ5 59 aa12.51□□□□□ -0.41
ME3-201ENST00000323418 RAB5BP61020 215 aa12.5□□□□□ -0.41
ME3-201ENST00000323418 GAGE10A6NGK3 116 aa12.49□□□□□ -0.41
ME3-201ENST00000323418 RHEBQ15382 184 aa12.49□□□□□ -0.41
ME3-201ENST00000323418 ZNF22P17026 224 aaPredicted RBP12.48□□□□□ -0.41
ME3-201ENST00000323418 C18orf32Q8TCD1 76 aa12.48□□□□□ -0.41
ME3-201ENST00000323418 H3BRM9 83 aa12.47□□□□□ -0.41
ME3-201ENST00000323418 SCO1O75880 301 aa12.47□□□□□ -0.41
ME3-201ENST00000323418 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
ME3-201ENST00000323418 PRR4Q16378 134 aa12.46□□□□□ -0.41
ME3-201ENST00000323418 ATP5LO75964 103 aa12.45□□□□□ -0.42
ME3-201ENST00000323418 VPREB1P12018 145 aa12.44□□□□□ -0.42
ME3-201ENST00000323418 KRTAP13-2Q52LG2 175 aa12.44□□□□□ -0.42
ME3-201ENST00000323418 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
ME3-201ENST00000323418 LINC00614P0C842 121 aa12.43□□□□□ -0.42
ME3-201ENST00000323418 CRYGAP11844 174 aa12.43□□□□□ -0.42
ME3-201ENST00000323418 Q8NDZ9 215 aa12.43□□□□□ -0.42
ME3-201ENST00000323418 ANAPC11Q9NYG5 84 aa12.43□□□□□ -0.42
ME3-201ENST00000323418 HBDP02042 147 aa12.42□□□□□ -0.42
ME3-201ENST00000323418 PFN2P35080 140 aa12.42□□□□□ -0.42
ME3-201ENST00000323418 PMCHL1Q16048 86 aa12.42□□□□□ -0.42
ME3-201ENST00000323418 SND1-IT1Q9HBX3 110 aa12.42□□□□□ -0.42
ME3-201ENST00000323418 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 TSPAN13O95857 204 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 TYMSOSQ8TAI1 123 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
ME3-201ENST00000323418 NDUFA6P56556 154 aa12.4□□□□□ -0.42
ME3-201ENST00000323418 UBE2AP49459 152 aa12.39□□□□□ -0.43
ME3-201ENST00000323418 MUC2Q02817 5179 aa12.38□□□□□ -0.43
ME3-201ENST00000323418 COX17Q14061 63 aa12.38□□□□□ -0.43
ME3-201ENST00000323418 FAM229BQ4G0N7 80 aa12.37□□□□□ -0.43
ME3-201ENST00000323418 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
ME3-201ENST00000323418 PRLHP81277 87 aa12.36□□□□□ -0.43
ME3-201ENST00000323418 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
ME3-201ENST00000323418 TMEM238C9JI98 176 aa12.35□□□□□ -0.43
ME3-201ENST00000323418 M0R378 163 aa12.35□□□□□ -0.43
ME3-201ENST00000323418 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
ME3-201ENST00000323418 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
ME3-201ENST00000323418 YPEL4Q96NS1 127 aa12.33□□□□□ -0.44
ME3-201ENST00000323418 RPL24P83731 157 aaKnown RBP12.32□□□□□ -0.44
ME3-201ENST00000323418 SFTA2Q6UW10 78 aa12.31□□□□□ -0.44
ME3-201ENST00000323418 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
ME3-201ENST00000323418 CHTOPQ9Y3Y2 248 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms