RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 UBE2D1P51668 147 aa6.61□□□□□ -1.35
TMEM39A-201ENST00000319172 A0A1B0GX51 115 aa6.6□□□□□ -1.35
TMEM39A-201ENST00000319172 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
TMEM39A-201ENST00000319172 ASH1LQ9NR48 2969 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-201ENST00000319172 PKIGQ9Y2B9 76 aa6.6□□□□□ -1.35
TMEM39A-201ENST00000319172 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-201ENST00000319172 CELA1Q9UNI1 258 aa6.6□□□□□ -1.35
TMEM39A-201ENST00000319172 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
TMEM39A-201ENST00000319172 VPREB1P12018 145 aa6.59□□□□□ -1.35
TMEM39A-201ENST00000319172 MIAQ16674 131 aa6.59□□□□□ -1.35
TMEM39A-201ENST00000319172 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-201ENST00000319172 LELP1Q5T871 98 aa6.58□□□□□ -1.36
TMEM39A-201ENST00000319172 NBEAL1Q6ZS30 2694 aa6.58□□□□□ -1.36
TMEM39A-201ENST00000319172 UBE2AP49459 152 aa6.58□□□□□ -1.36
TMEM39A-201ENST00000319172 COX6A2Q02221 97 aa6.58□□□□□ -1.36
TMEM39A-201ENST00000319172 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
TMEM39A-201ENST00000319172 HAMPP81172 84 aa6.57□□□□□ -1.36
TMEM39A-201ENST00000319172 CARD19Q96LW7 228 aa6.57□□□□□ -1.36
TMEM39A-201ENST00000319172 NBEAL2Q6ZNJ1 2754 aa6.57□□□□□ -1.36
TMEM39A-201ENST00000319172 X6R8D5 127 aa6.57□□□□□ -1.36
TMEM39A-201ENST00000319172 F8W1H4 67 aa6.57□□□□□ -1.36
TMEM39A-201ENST00000319172 NCR3O14931 201 aa6.57□□□□□ -1.36
TMEM39A-201ENST00000319172 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 WFDC2Q14508 124 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 CXCL5P42830 114 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 C14orf177Q52M58 125 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 AMELXQ99217 191 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 CLEC2BQ92478 149 aa6.56□□□□□ -1.36
TMEM39A-201ENST00000319172 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 DSCR8Q96T75 97 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 LINC00308Q8TCZ7 52 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 XAGE1AQ9HD64 81 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 INAFM2P0DMQ5 153 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 WFDC9Q8NEX5 89 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
TMEM39A-201ENST00000319172 NF1P21359 2839 aa6.54□□□□□ -1.36
TMEM39A-201ENST00000319172 SPATA3Q8NHX4 192 aa6.54□□□□□ -1.36
TMEM39A-201ENST00000319172 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
TMEM39A-201ENST00000319172 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
TMEM39A-201ENST00000319172 NDUFC2O95298 119 aa6.54□□□□□ -1.36
TMEM39A-201ENST00000319172 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
TMEM39A-201ENST00000319172 A8MTW9 85 aa6.53□□□□□ -1.36
TMEM39A-201ENST00000319172 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-201ENST00000319172 A0A087WZ39 114 aa6.53□□□□□ -1.36
TMEM39A-201ENST00000319172 PPDPFLQ8WWR9 84 aa6.53□□□□□ -1.36
TMEM39A-201ENST00000319172 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
TMEM39A-201ENST00000319172 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 B5MCH6 92 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 LINC01620Q4KN68 170 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 A0A096LNI7 61 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 IBA57-AS1B1ANH7 110 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 BAALC-AS2P0C853 105 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 Q6Q795 121 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 ZNF575Q86XF7 245 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 WFDC10BQ8IUB3 73 aa6.52□□□□□ -1.37
TMEM39A-201ENST00000319172 TCL1BO95988 128 aa6.51□□□□□ -1.37
TMEM39A-201ENST00000319172 CSNK1G2-AS1Q8NCQ2 148 aa6.51□□□□□ -1.37
TMEM39A-201ENST00000319172 A0A0B4J2C4 111 aa6.51□□□□□ -1.37
TMEM39A-201ENST00000319172 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
TMEM39A-201ENST00000319172 SBSPONQ8IVN8 264 aa6.51□□□□□ -1.37
TMEM39A-201ENST00000319172 UFSP1Q6NVU6 142 aa6.51□□□□□ -1.37
TMEM39A-201ENST00000319172 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
TMEM39A-201ENST00000319172 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
TMEM39A-201ENST00000319172 LYPD5Q6UWN5 251 aa6.5□□□□□ -1.37
TMEM39A-201ENST00000319172 NSD1Q96L73 2696 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-201ENST00000319172 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-201ENST00000319172 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
TMEM39A-201ENST00000319172 Q8NAQ8 132 aa6.49□□□□□ -1.37
TMEM39A-201ENST00000319172 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
TMEM39A-201ENST00000319172 H0YGX0 51 aa6.49□□□□□ -1.37
TMEM39A-201ENST00000319172 UNQ6190/PRO20217Q6UXQ8 127 aa6.49□□□□□ -1.37
TMEM39A-201ENST00000319172 TRIAP1O43715 76 aa6.49□□□□□ -1.37
TMEM39A-201ENST00000319172 Q8N3U1 123 aa6.49□□□□□ -1.37
TMEM39A-201ENST00000319172 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
TMEM39A-201ENST00000319172 CYSRT1A8MQ03 144 aa6.48□□□□□ -1.37
TMEM39A-201ENST00000319172 FAM19A5Q7Z5A7 132 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-201ENST00000319172 FBN2P35556 2912 aa6.48□□□□□ -1.37
TMEM39A-201ENST00000319172 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-201ENST00000319172 KRTAP10-11P60412 298 aa6.48□□□□□ -1.37
TMEM39A-201ENST00000319172 A0A1B0GUV1 79 aa6.47□□□□□ -1.37
TMEM39A-201ENST00000319172 TIMM17BO60830 172 aa6.47□□□□□ -1.37
TMEM39A-201ENST00000319172 NUPR2A6NF83 97 aa6.47□□□□□ -1.37
TMEM39A-201ENST00000319172 Q8IZM0 81 aa6.47□□□□□ -1.37
TMEM39A-201ENST00000319172 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.37
TMEM39A-201ENST00000319172 PLAC8L1A1L4L8 177 aa6.46□□□□□ -1.38
TMEM39A-201ENST00000319172 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
TMEM39A-201ENST00000319172 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
TMEM39A-201ENST00000319172 NDUFS5O43920 106 aa6.46□□□□□ -1.38
TMEM39A-201ENST00000319172 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
TMEM39A-201ENST00000319172 FAM19A1Q7Z5A9 133 aa6.45□□□□□ -1.38
TMEM39A-201ENST00000319172 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.38
TMEM39A-201ENST00000319172 TRACP01848 142 aa6.45□□□□□ -1.38
TMEM39A-201ENST00000319172 C1orf195Q5TG92 126 aa6.45□□□□□ -1.38
TMEM39A-201ENST00000319172 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
TMEM39A-201ENST00000319172 TRBV10-2A0A0K0K1G8 114 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms