RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 CDC42SE2Q9NRR3 84 aa6.04□□□□□ -1.44
PDLIM5-201ENST00000317968 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
PDLIM5-201ENST00000317968 SPANXCQ9NY87 97 aa6.04□□□□□ -1.44
PDLIM5-201ENST00000317968 USP17L23D6RBM5 183 aa6.04□□□□□ -1.44
PDLIM5-201ENST00000317968 LOC100131303A0A0U1RQF7 123 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 J3QL48 77 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 C2orf48Q96LS8 159 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 ATRQ13535 2644 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 NREPQ16612 68 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 PCP2Q8IVA1 136 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 Q8NAQ8 132 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 Q8IZM0 81 aa6.03□□□□□ -1.44
PDLIM5-201ENST00000317968 TP73-AS1Q9UF72 201 aa6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 M0QXV9 152 aa6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 MUC4Q99102 2169 aa6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 GIG44P09565 113 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 C12orf74Q32Q52 190 aa6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 LINC01556Q5JQF7 62 aa6.02□□□□□ -1.45
PDLIM5-201ENST00000317968 H0Y9J4 135 aa6.01□□□□□ -1.45
PDLIM5-201ENST00000317968 CDPF1Q6NVV7 123 aa6.01□□□□□ -1.45
PDLIM5-201ENST00000317968 MUSTN1Q8IVN3 82 aa6.01□□□□□ -1.45
PDLIM5-201ENST00000317968 NBDYA0A0U1RRE5 68 aa6.01□□□□□ -1.45
PDLIM5-201ENST00000317968 PRM2P04554 102 aa6.01□□□□□ -1.45
PDLIM5-201ENST00000317968 KALRNO60229 2985 aa6.01□□□□□ -1.45
PDLIM5-201ENST00000317968 CDKN2A-AS1Q9UH64 79 aa6□□□□□ -1.45
PDLIM5-201ENST00000317968 C9orf118A6NHY6 69 aa6□□□□□ -1.45
PDLIM5-201ENST00000317968 TRAV23DV6A0A075B6W5 121 aa6□□□□□ -1.45
PDLIM5-201ENST00000317968 NACAE9PAV3 2078 aa6□□□□□ -1.45
PDLIM5-201ENST00000317968 BAHCC1Q9P281 2608 aa6□□□□□ -1.45
PDLIM5-201ENST00000317968 C1orf137Q5JT78 98 aa5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 Q6ZSN1 163 aa5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 DNAH14Q0VDD8 3507 aa5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 APCP25054 2843 aa5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 RBM3P98179 157 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 MP68P56378 58 aa5.99□□□□□ -1.45
PDLIM5-201ENST00000317968 LINC00242Q5T6M2 205 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 ATMQ13315 3056 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 LINC00337Q8N6G1 96 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 K7EIL1 84 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 FREM2Q5SZK8 3169 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 XAGE1AQ9HD64 81 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 CHKB-CPT1BH3BT56 60 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 UPK3BQ9BT76 320 aa5.98□□□□□ -1.45
PDLIM5-201ENST00000317968 ACYP1P07311 99 aa5.97□□□□□ -1.45
PDLIM5-201ENST00000317968 TEX15Q9BXT5 2789 aa5.97□□□□□ -1.45
PDLIM5-201ENST00000317968 IGLV5-45A0A087WSX0 123 aa5.97□□□□□ -1.45
PDLIM5-201ENST00000317968 TRBV10-2A0A0K0K1G8 114 aa5.97□□□□□ -1.45
PDLIM5-201ENST00000317968 ITPR2Q14571 2701 aa5.97□□□□□ -1.45
PDLIM5-201ENST00000317968 ZNF575Q86XF7 245 aa5.97□□□□□ -1.45
PDLIM5-201ENST00000317968 WFDC10BQ8IUB3 73 aa5.96□□□□□ -1.45
PDLIM5-201ENST00000317968 A0A0B4J2C4 111 aa5.96□□□□□ -1.45
PDLIM5-201ENST00000317968 CYSRT1A8MQ03 144 aa5.96□□□□□ -1.46
PDLIM5-201ENST00000317968 C10orf25Q5T742 122 aa5.96□□□□□ -1.46
PDLIM5-201ENST00000317968 FAM19A3Q7Z5A8 133 aa5.96□□□□□ -1.46
PDLIM5-201ENST00000317968 CELA1Q9UNI1 258 aa5.96□□□□□ -1.46
PDLIM5-201ENST00000317968 UBE2V1Q13404 147 aa5.96□□□□□ -1.46
PDLIM5-201ENST00000317968 A0A1B0GX51 115 aa5.95□□□□□ -1.46
PDLIM5-201ENST00000317968 DAND5Q8N907 189 aa5.95□□□□□ -1.46
PDLIM5-201ENST00000317968 UTP20O75691 2785 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-201ENST00000317968 PPDPFLQ8WWR9 84 aa5.95□□□□□ -1.46
PDLIM5-201ENST00000317968 BOD1L1Q8NFC6 3051 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 TM2D3Q9BRN9 247 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 IGKV2-28A0A075B6P5 120 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 IGKV2D-28P01615 120 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 NTM-AS1Q6ZSK4 140 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 HRNRQ86YZ3 2850 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 GCN1Q92616 2671 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 RTL8CO15255 209 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 KRTAP10-11P60412 298 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 A0A096LNI7 61 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 SMIM1B2RUZ4 78 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 F8W1H4 67 aa5.94□□□□□ -1.46
PDLIM5-201ENST00000317968 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 A0A1W2PPM0 123 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 PRYO14603 147 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 NDUFC2-KCTD14E9PQ53 114 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 MAST4O15021 2626 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 LINC00694P0DN24 101 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 ESRGQ1W209 222 aa5.93□□□□□ -1.46
PDLIM5-201ENST00000317968 K7EP34 96 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 Q6JHZ5 121 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 C2orf91Q6ZV80 131 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 PPDPFQ9H3Y8 114 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 NSD1Q96L73 2696 aaPredicted RBP5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 FXYD2P54710 66 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 SEC61GP60059 68 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 NAA38Q9BRA0 125 aaKnown RBP5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
PDLIM5-201ENST00000317968 COL12A1Q99715 3063 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 MAPKAPK5-AS1Q8N8E1 139 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 MRPL55Q7Z7F7 128 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 IGLV4-60A0A075B6I1 120 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
PDLIM5-201ENST00000317968 H3BMG7 143 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms