RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 IGHV4-30-4P0DP06 118 aa10.17□□□□□ -0.78
CLK4-201ENST00000316308 HERV-K104P63124 156 aa10.16□□□□□ -0.78
CLK4-201ENST00000316308 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
CLK4-201ENST00000316308 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.78
CLK4-201ENST00000316308 CCL18P55774 89 aa10.15□□□□□ -0.78
CLK4-201ENST00000316308 DAD1P61803 113 aa10.15□□□□□ -0.78
CLK4-201ENST00000316308 COX6CP09669 75 aa10.15□□□□□ -0.79
CLK4-201ENST00000316308 RETNQ9HD89 108 aa10.15□□□□□ -0.79
CLK4-201ENST00000316308 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
CLK4-201ENST00000316308 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
CLK4-201ENST00000316308 LYRM9A8MSI8 78 aa10.13□□□□□ -0.79
CLK4-201ENST00000316308 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
CLK4-201ENST00000316308 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
CLK4-201ENST00000316308 COL6A5A8TX70 2615 aa10.13□□□□□ -0.79
CLK4-201ENST00000316308 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
CLK4-201ENST00000316308 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
CLK4-201ENST00000316308 C9orf116Q5BN46 136 aaPredicted RBP10.12□□□□□ -0.79
CLK4-201ENST00000316308 ANGP03950 147 aaKnown RBP10.12□□□□□ -0.79
CLK4-201ENST00000316308 APOC4P55056 127 aa10.12□□□□□ -0.79
CLK4-201ENST00000316308 COX7A2LO14548 114 aa10.11□□□□□ -0.79
CLK4-201ENST00000316308 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
CLK4-201ENST00000316308 Q9HAA7 133 aa10.11□□□□□ -0.79
CLK4-201ENST00000316308 NBEAL1Q6ZS30 2694 aa10.11□□□□□ -0.79
CLK4-201ENST00000316308 WFDC9Q8NEX5 89 aa10.1□□□□□ -0.79
CLK4-201ENST00000316308 SS18Q15532 418 aa10.1□□□□□ -0.79
CLK4-201ENST00000316308 UBE2WQ96B02 151 aa10.1□□□□□ -0.79
CLK4-201ENST00000316308 M0QXV9 152 aa10.09□□□□□ -0.79
CLK4-201ENST00000316308 CHCHD10Q8WYQ3 142 aaPredicted RBP10.09□□□□□ -0.79
CLK4-201ENST00000316308 ATP5G1P05496 136 aa10.09□□□□□ -0.79
CLK4-201ENST00000316308 REG3AQ06141 175 aa10.09□□□□□ -0.79
CLK4-201ENST00000316308 C22orf24Q9Y442 160 aa10.09□□□□□ -0.79
CLK4-201ENST00000316308 KIAA0087Q14695 138 aa10.08□□□□□ -0.8
CLK4-201ENST00000316308 SMIM11BQ8TCY0 68 aa10.08□□□□□ -0.8
CLK4-201ENST00000316308 C6orf223Q8N319 242 aa10.07□□□□□ -0.8
CLK4-201ENST00000316308 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
CLK4-201ENST00000316308 CRPP02741 224 aa10.07□□□□□ -0.8
CLK4-201ENST00000316308 Q8NDZ9 215 aa10.07□□□□□ -0.8
CLK4-201ENST00000316308 LINC01600Q96MT4 127 aa10.07□□□□□ -0.8
CLK4-201ENST00000316308 A0A087WYN8 130 aa10.06□□□□□ -0.8
CLK4-201ENST00000316308 MIFP14174 115 aa10.06□□□□□ -0.8
CLK4-201ENST00000316308 H3BT86 120 aa10.06□□□□□ -0.8
CLK4-201ENST00000316308 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
CLK4-201ENST00000316308 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
CLK4-201ENST00000316308 C10orf25Q5T742 122 aa10.05□□□□□ -0.8
CLK4-201ENST00000316308 KRTAP24-1Q3LI83 254 aa10.04□□□□□ -0.8
CLK4-201ENST00000316308 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
CLK4-201ENST00000316308 DNAH3Q8TD57 4116 aa10.04□□□□□ -0.8
CLK4-201ENST00000316308 CD164L2Q6UWJ8 174 aa10.04□□□□□ -0.8
CLK4-201ENST00000316308 Q8IZM0 81 aa10.04□□□□□ -0.8
CLK4-201ENST00000316308 OR13C6PQ8NH95 151 aa10.04□□□□□ -0.8
CLK4-201ENST00000316308 RPL28P46779 137 aaKnown RBP10.03□□□□□ -0.8
CLK4-201ENST00000316308 COPS9Q8WXC6 57 aa10.03□□□□□ -0.8
CLK4-201ENST00000316308 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
CLK4-201ENST00000316308 CKS1BP61024 79 aa10.02□□□□□ -0.81
CLK4-201ENST00000316308 WIPF1O43516 503 aa10.01□□□□□ -0.81
CLK4-201ENST00000316308 BAALC-AS2P0C853 105 aa10.01□□□□□ -0.81
CLK4-201ENST00000316308 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
CLK4-201ENST00000316308 TTC32Q5I0X7 151 aa10.01□□□□□ -0.81
CLK4-201ENST00000316308 SLPIP03973 132 aa10.01□□□□□ -0.81
CLK4-201ENST00000316308 MALP21145 153 aa10.01□□□□□ -0.81
CLK4-201ENST00000316308 A0A1B0GV72 72 aa10□□□□□ -0.81
CLK4-201ENST00000316308 ENHOQ6UWT2 76 aa10□□□□□ -0.81
CLK4-201ENST00000316308 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
CLK4-201ENST00000316308 Q6ZTC4 211 aa10□□□□□ -0.81
CLK4-201ENST00000316308 NANOS2P60321 138 aaKnown RBP9.99□□□□□ -0.81
CLK4-201ENST00000316308 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
CLK4-201ENST00000316308 WFDC10BQ8IUB3 73 aa9.99□□□□□ -0.81
CLK4-201ENST00000316308 SCGB1A1P11684 91 aa9.99□□□□□ -0.81
CLK4-201ENST00000316308 PRB2P02812 416 aaPredicted RBP9.98□□□□□ -0.81
CLK4-201ENST00000316308 LELP1Q5T871 98 aa9.98□□□□□ -0.81
CLK4-201ENST00000316308 LYSTQ99698 3801 aa9.98□□□□□ -0.81
CLK4-201ENST00000316308 TRACP01848 142 aa9.98□□□□□ -0.81
CLK4-201ENST00000316308 C15orf53Q8NAA6 179 aa9.98□□□□□ -0.81
CLK4-201ENST00000316308 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
CLK4-201ENST00000316308 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
CLK4-201ENST00000316308 LECT2O14960 151 aa9.97□□□□□ -0.81
CLK4-201ENST00000316308 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
CLK4-201ENST00000316308 CYSRT1A8MQ03 144 aa9.96□□□□□ -0.81
CLK4-201ENST00000316308 DEFB121Q5J5C9 76 aa9.96□□□□□ -0.81
CLK4-201ENST00000316308 NCR3O14931 201 aa9.96□□□□□ -0.82
CLK4-201ENST00000316308 MGAM2Q2M2H8 2515 aa9.96□□□□□ -0.82
CLK4-201ENST00000316308 KPRPQ5T749 579 aaPredicted RBP9.95□□□□□ -0.82
CLK4-201ENST00000316308 SMCR5Q8TEV8 140 aa9.95□□□□□ -0.82
CLK4-201ENST00000316308 PRR34Q9NV39 138 aa9.94□□□□□ -0.82
CLK4-201ENST00000316308 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CLK4-201ENST00000316308 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
CLK4-201ENST00000316308 A0A0J9YWU9 116 aa9.93□□□□□ -0.82
CLK4-201ENST00000316308 SNCGO76070 127 aa9.92□□□□□ -0.82
CLK4-201ENST00000316308 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
CLK4-201ENST00000316308 ESRGQ1W209 222 aa9.91□□□□□ -0.82
CLK4-201ENST00000316308 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
CLK4-201ENST00000316308 C3orf56Q8N813 242 aa9.91□□□□□ -0.82
CLK4-201ENST00000316308 XAGE1AQ9HD64 81 aa9.9□□□□□ -0.82
CLK4-201ENST00000316308 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
CLK4-201ENST00000316308 DNAL4O96015 105 aa9.89□□□□□ -0.83
CLK4-201ENST00000316308 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
CLK4-201ENST00000316308 COL7A1Q02388 2944 aa9.89□□□□□ -0.83
CLK4-201ENST00000316308 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
CLK4-201ENST00000316308 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
CLK4-201ENST00000316308 GAGE2EQ4V326 116 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms