RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 MUC7Q8TAX7 377 aa13.21□□□□□ -0.29
UBXN2A-201ENST00000309033 A0A087WVE0 104 aa13.21□□□□□ -0.29
UBXN2A-201ENST00000309033 REG3GQ6UW15 175 aa13.21□□□□□ -0.29
UBXN2A-201ENST00000309033 BEAN1Q3B7T3 259 aa13.21□□□□□ -0.3
UBXN2A-201ENST00000309033 MYO18BQ8IUG5 2567 aa13.2□□□□□ -0.3
UBXN2A-201ENST00000309033 FAM240AA0A1B0GVK7 77 aa13.19□□□□□ -0.3
UBXN2A-201ENST00000309033 C1orf137Q5JT78 98 aa13.18□□□□□ -0.3
UBXN2A-201ENST00000309033 NDUFC1O43677 76 aa13.18□□□□□ -0.3
UBXN2A-201ENST00000309033 CSDC2Q9Y534 153 aaKnown RBP13.18□□□□□ -0.3
UBXN2A-201ENST00000309033 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
UBXN2A-201ENST00000309033 A8MTW9 85 aa13.16□□□□□ -0.3
UBXN2A-201ENST00000309033 LYPD5Q6UWN5 251 aa13.15□□□□□ -0.3
UBXN2A-201ENST00000309033 Q8N9L7 120 aa13.15□□□□□ -0.3
UBXN2A-201ENST00000309033 CIRBP-AS1Q8TBR5 109 aa13.15□□□□□ -0.3
UBXN2A-201ENST00000309033 ATP5EP56381 51 aaPredicted RBP13.14□□□□□ -0.31
UBXN2A-201ENST00000309033 ESRGQ1W209 222 aa13.13□□□□□ -0.31
UBXN2A-201ENST00000309033 PRR15LQ9BU68 103 aa13.12□□□□□ -0.31
UBXN2A-201ENST00000309033 IGLV5-52A0A0A0MRZ9 124 aa13.12□□□□□ -0.31
UBXN2A-201ENST00000309033 MRPL55Q7Z7F7 128 aaKnown RBP13.1□□□□□ -0.31
UBXN2A-201ENST00000309033 A0A1B0GUV1 79 aa13.1□□□□□ -0.31
UBXN2A-201ENST00000309033 A6NED7 52 aa13.09□□□□□ -0.31
UBXN2A-201ENST00000309033 DEFB116Q30KQ4 102 aa13.09□□□□□ -0.31
UBXN2A-201ENST00000309033 KIF25-AS1Q9Y6Z4 181 aa13.09□□□□□ -0.31
UBXN2A-201ENST00000309033 LINC01556Q5JQF7 62 aa13.09□□□□□ -0.31
UBXN2A-201ENST00000309033 RETNLBQ9BQ08 111 aa13.09□□□□□ -0.31
UBXN2A-201ENST00000309033 IGHV6-1A0A0B4J1U7 121 aa13.08□□□□□ -0.32
UBXN2A-201ENST00000309033 Q6Q795 121 aa13.08□□□□□ -0.32
UBXN2A-201ENST00000309033 V9GYY9 64 aa13.08□□□□□ -0.32
UBXN2A-201ENST00000309033 TLN1Q9Y490 2541 aaKnown RBP13.08□□□□□ -0.32
UBXN2A-201ENST00000309033 Q9BRP9 147 aa13.08□□□□□ -0.32
UBXN2A-201ENST00000309033 Q6ZRU5 148 aa13.08□□□□□ -0.32
UBXN2A-201ENST00000309033 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
UBXN2A-201ENST00000309033 LINC00575Q6W349 94 aa13.07□□□□□ -0.32
UBXN2A-201ENST00000309033 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
UBXN2A-201ENST00000309033 LINC00208Q96KT6 92 aa13.07□□□□□ -0.32
UBXN2A-201ENST00000309033 K7ERS5 55 aa13.06□□□□□ -0.32
UBXN2A-201ENST00000309033 AGRNO00468 2067 aa13.05□□□□□ -0.32
UBXN2A-201ENST00000309033 TRAV7A0A075B6U4 112 aa13.05□□□□□ -0.32
UBXN2A-201ENST00000309033 PIEZO1Q92508 2521 aa13.05□□□□□ -0.32
UBXN2A-201ENST00000309033 LINC00337Q8N6G1 96 aa13.05□□□□□ -0.32
UBXN2A-201ENST00000309033 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
UBXN2A-201ENST00000309033 MYO9AB2RTY4 2548 aa13.04□□□□□ -0.32
UBXN2A-201ENST00000309033 Q8N3U1 123 aa13.03□□□□□ -0.32
UBXN2A-201ENST00000309033 CENPFP49454 3210 aa13.02□□□□□ -0.32
UBXN2A-201ENST00000309033 SERP1Q9Y6X1 66 aa13.02□□□□□ -0.33
UBXN2A-201ENST00000309033 A0A087WSZ3 146 aa13.02□□□□□ -0.33
UBXN2A-201ENST00000309033 C2orf48Q96LS8 159 aa13.02□□□□□ -0.33
UBXN2A-201ENST00000309033 PRLHP81277 87 aa13.01□□□□□ -0.33
UBXN2A-201ENST00000309033 SOSTDC1Q6X4U4 206 aa13.01□□□□□ -0.33
UBXN2A-201ENST00000309033 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
UBXN2A-201ENST00000309033 Q6ZVQ6 151 aa12.99□□□□□ -0.33
UBXN2A-201ENST00000309033 PRYO14603 147 aa12.99□□□□□ -0.33
UBXN2A-201ENST00000309033 Q8N2B8 174 aa12.98□□□□□ -0.33
UBXN2A-201ENST00000309033 LINC00846Q9NV44 126 aa12.98□□□□□ -0.33
UBXN2A-201ENST00000309033 LINC00315P59091 139 aa12.98□□□□□ -0.33
UBXN2A-201ENST00000309033 PCOTHQ58A44 107 aa12.98□□□□□ -0.33
UBXN2A-201ENST00000309033 FHL3Q13643 280 aa12.97□□□□□ -0.33
UBXN2A-201ENST00000309033 FAM19A4Q96LR4 140 aa12.97□□□□□ -0.33
UBXN2A-201ENST00000309033 LINC01546A6NGU7 62 aa12.96□□□□□ -0.33
UBXN2A-201ENST00000309033 C1orf134Q5TEV5 83 aa12.96□□□□□ -0.33
UBXN2A-201ENST00000309033 LINC01561Q8N1V8 128 aa12.95□□□□□ -0.34
UBXN2A-201ENST00000309033 F8WDY8 70 aa12.94□□□□□ -0.34
UBXN2A-201ENST00000309033 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
UBXN2A-201ENST00000309033 IGLV5-39A0A0G2JS06 123 aa12.94□□□□□ -0.34
UBXN2A-201ENST00000309033 Q9UF83 564 aa12.94□□□□□ -0.34
UBXN2A-201ENST00000309033 SMIM26A0A096LP01 95 aa12.92□□□□□ -0.34
UBXN2A-201ENST00000309033 TRBV7-6A0A0J9YX20 115 aa12.91□□□□□ -0.34
UBXN2A-201ENST00000309033 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
UBXN2A-201ENST00000309033 IGHV3OR16-9A0A0B4J2B5 98 aa12.9□□□□□ -0.34
UBXN2A-201ENST00000309033 COL4A2P08572 1712 aa12.9□□□□□ -0.34
UBXN2A-201ENST00000309033 PTPRBP23467 1997 aa12.9□□□□□ -0.35
UBXN2A-201ENST00000309033 SMCR5Q8TEV8 140 aa12.89□□□□□ -0.35
UBXN2A-201ENST00000309033 JMJD1CQ15652 2540 aa12.89□□□□□ -0.35
UBXN2A-201ENST00000309033 H0Y9P7 68 aa12.88□□□□□ -0.35
UBXN2A-201ENST00000309033 TRBV7-7A0A0K0K1E9 115 aa12.87□□□□□ -0.35
UBXN2A-201ENST00000309033 KIAA0087Q14695 138 aa12.87□□□□□ -0.35
UBXN2A-201ENST00000309033 X6R8D5 127 aa12.86□□□□□ -0.35
UBXN2A-201ENST00000309033 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
UBXN2A-201ENST00000309033 SPINK1P00995 79 aa12.86□□□□□ -0.35
UBXN2A-201ENST00000309033 CDIP1Q9H305 208 aa12.86□□□□□ -0.35
UBXN2A-201ENST00000309033 HCG22E2RYF7 251 aa12.85□□□□□ -0.35
UBXN2A-201ENST00000309033 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
UBXN2A-201ENST00000309033 DOPEY1Q5JWR5 2465 aa12.84□□□□□ -0.35
UBXN2A-201ENST00000309033 COL27A1Q8IZC6 1860 aaPredicted RBP12.84□□□□□ -0.35
UBXN2A-201ENST00000309033 MDFIQ99750 246 aa12.83□□□□□ -0.36
UBXN2A-201ENST00000309033 PSPHP1O15172 72 aa12.83□□□□□ -0.36
UBXN2A-201ENST00000309033 TMEM254Q8TBM7 123 aa12.82□□□□□ -0.36
UBXN2A-201ENST00000309033 FAM218AQ96MZ4 157 aa12.82□□□□□ -0.36
UBXN2A-201ENST00000309033 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
UBXN2A-201ENST00000309033 SPATA3Q8NHX4 192 aa12.81□□□□□ -0.36
UBXN2A-201ENST00000309033 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
UBXN2A-201ENST00000309033 CEP295Q9C0D2 2601 aa12.8□□□□□ -0.36
UBXN2A-201ENST00000309033 SMCPP49901 116 aaPredicted RBP12.8□□□□□ -0.36
UBXN2A-201ENST00000309033 C1orf195Q5TG92 126 aa12.8□□□□□ -0.36
UBXN2A-201ENST00000309033 ANKRD11Q6UB99 2663 aaPredicted RBP12.78□□□□□ -0.36
UBXN2A-201ENST00000309033 SMIM29Q86T20 159 aa12.78□□□□□ -0.36
UBXN2A-201ENST00000309033 USP9XQ93008 2570 aaPredicted RBP12.78□□□□□ -0.36
UBXN2A-201ENST00000309033 LRRK2Q5S007 2527 aa12.77□□□□□ -0.36
UBXN2A-201ENST00000309033 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.37
UBXN2A-201ENST00000309033 FN1P02751 2386 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms