RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CCKP06307 115 aa9.28□□□□□ -0.92
TRIM35-201ENST00000305364 C11orf72Q8NBR9 251 aa9.28□□□□□ -0.92
TRIM35-201ENST00000305364 NDUFC2O95298 119 aa9.27□□□□□ -0.92
TRIM35-201ENST00000305364 DAD1P61803 113 aa9.27□□□□□ -0.92
TRIM35-201ENST00000305364 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
TRIM35-201ENST00000305364 RPS28P62857 69 aaKnown RBP9.27□□□□□ -0.93
TRIM35-201ENST00000305364 APOC4P55056 127 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
TRIM35-201ENST00000305364 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 C6orf99Q4VX62 202 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 GYPEP15421 78 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 SNURFQ9Y675 71 aa9.26□□□□□ -0.93
TRIM35-201ENST00000305364 TRBV6-4A0A1B0GX49 114 aa9.25□□□□□ -0.93
TRIM35-201ENST00000305364 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
TRIM35-201ENST00000305364 TRBV6-8A0A0A6YYG3 113 aa9.25□□□□□ -0.93
TRIM35-201ENST00000305364 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
TRIM35-201ENST00000305364 C9orf129Q5T035 196 aaKnown RBP9.25□□□□□ -0.93
TRIM35-201ENST00000305364 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
TRIM35-201ENST00000305364 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
TRIM35-201ENST00000305364 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
TRIM35-201ENST00000305364 ZNF702PQ9H963 129 aa9.24□□□□□ -0.93
TRIM35-201ENST00000305364 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
TRIM35-201ENST00000305364 IGHV4-31P0DP07 118 aa9.23□□□□□ -0.93
TRIM35-201ENST00000305364 C4orf3Q8WVX3 66 aa9.23□□□□□ -0.93
TRIM35-201ENST00000305364 ODF3L2Q3SX64 289 aa9.23□□□□□ -0.93
TRIM35-201ENST00000305364 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
TRIM35-201ENST00000305364 LAMA5O15230 3695 aa9.22□□□□□ -0.93
TRIM35-201ENST00000305364 LINC01561Q8N1V8 128 aa9.22□□□□□ -0.93
TRIM35-201ENST00000305364 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
TRIM35-201ENST00000305364 ASH1LQ9NR48 2969 aaKnown RBP9.22□□□□□ -0.93
TRIM35-201ENST00000305364 LINC00959A0A1B0GUT2 108 aa9.21□□□□□ -0.93
TRIM35-201ENST00000305364 Q8N814 137 aa9.21□□□□□ -0.93
TRIM35-201ENST00000305364 DNAJC9-AS1A6NH13 148 aa9.21□□□□□ -0.94
TRIM35-201ENST00000305364 C9orf66Q5T8R8 295 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 Q6YL49 198 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 ESM1Q9NQ30 184 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 A0A087WZ39 114 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 UBE2DNLQ8IWF7 75 aa9.2□□□□□ -0.94
TRIM35-201ENST00000305364 FHL2Q14192 279 aa9.18□□□□□ -0.94
TRIM35-201ENST00000305364 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
TRIM35-201ENST00000305364 IGHV3OR16-9A0A0B4J2B5 98 aa9.18□□□□□ -0.94
TRIM35-201ENST00000305364 ITPR3Q14573 2671 aa9.18□□□□□ -0.94
TRIM35-201ENST00000305364 PKIGQ9Y2B9 76 aa9.18□□□□□ -0.94
TRIM35-201ENST00000305364 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
TRIM35-201ENST00000305364 PLA2G2AP14555 144 aa9.17□□□□□ -0.94
TRIM35-201ENST00000305364 C9orf116Q5BN46 136 aaPredicted RBP9.17□□□□□ -0.94
TRIM35-201ENST00000305364 Q6ZQY7 126 aa9.16□□□□□ -0.94
TRIM35-201ENST00000305364 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
TRIM35-201ENST00000305364 BRK1Q8WUW1 75 aa9.16□□□□□ -0.94
TRIM35-201ENST00000305364 F8WEM9 126 aa9.16□□□□□ -0.94
TRIM35-201ENST00000305364 TRAV7A0A075B6U4 112 aa9.15□□□□□ -0.94
TRIM35-201ENST00000305364 A8MTW9 85 aa9.15□□□□□ -0.94
TRIM35-201ENST00000305364 NDUFC2-KCTD14E9PQ53 114 aa9.14□□□□□ -0.95
TRIM35-201ENST00000305364 KRTAP10-9P60411 292 aa9.14□□□□□ -0.95
TRIM35-201ENST00000305364 FLNAP21333 2647 aaKnown RBP9.14□□□□□ -0.95
TRIM35-201ENST00000305364 Q8IZM0 81 aa9.14□□□□□ -0.95
TRIM35-201ENST00000305364 CHCHD10Q8WYQ3 142 aaPredicted RBP9.14□□□□□ -0.95
TRIM35-201ENST00000305364 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
TRIM35-201ENST00000305364 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
TRIM35-201ENST00000305364 DCHS2Q6V1P9 2916 aa9.13□□□□□ -0.95
TRIM35-201ENST00000305364 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
TRIM35-201ENST00000305364 MPLKIPQ8TAP9 179 aa9.13□□□□□ -0.95
TRIM35-201ENST00000305364 RMI2Q96E14 147 aa9.13□□□□□ -0.95
TRIM35-201ENST00000305364 PSCAO43653 123 aa9.12□□□□□ -0.95
TRIM35-201ENST00000305364 SPENQ96T58 3664 aaKnown RBP9.12□□□□□ -0.95
TRIM35-201ENST00000305364 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
TRIM35-201ENST00000305364 DEFB4AO15263 64 aa9.12□□□□□ -0.95
TRIM35-201ENST00000305364 PDE6GP18545 87 aa9.12□□□□□ -0.95
TRIM35-201ENST00000305364 C22orf24Q9Y442 160 aa9.12□□□□□ -0.95
TRIM35-201ENST00000305364 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
TRIM35-201ENST00000305364 REG3AQ06141 175 aa9.11□□□□□ -0.95
TRIM35-201ENST00000305364 FAM19A3Q7Z5A8 133 aa9.11□□□□□ -0.95
TRIM35-201ENST00000305364 PRO0255Q9UI72 69 aa9.11□□□□□ -0.95
TRIM35-201ENST00000305364 Q8N3U1 123 aa9.1□□□□□ -0.95
TRIM35-201ENST00000305364 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
TRIM35-201ENST00000305364 SPART-AS1P0CW21 52 aa9.1□□□□□ -0.95
TRIM35-201ENST00000305364 LINC01547P58512 204 aaPredicted RBP9.1□□□□□ -0.95
TRIM35-201ENST00000305364 SMIM26A0A096LP01 95 aa9.09□□□□□ -0.95
TRIM35-201ENST00000305364 NREPQ16612 68 aa9.09□□□□□ -0.95
TRIM35-201ENST00000305364 Q6ZVQ6 151 aa9.09□□□□□ -0.95
TRIM35-201ENST00000305364 RELNP78509 3460 aa9.09□□□□□ -0.95
TRIM35-201ENST00000305364 DEFB105AQ8NG35 78 aa9.09□□□□□ -0.95
TRIM35-201ENST00000305364 INAFM1C9JVW0 142 aa9.08□□□□□ -0.96
TRIM35-201ENST00000305364 FLNCQ14315 2725 aa9.08□□□□□ -0.96
TRIM35-201ENST00000305364 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
TRIM35-201ENST00000305364 HRNRQ86YZ3 2850 aaPredicted RBP9.08□□□□□ -0.96
TRIM35-201ENST00000305364 DEFB135Q30KP9 77 aa9.08□□□□□ -0.96
TRIM35-201ENST00000305364 SMR3AQ99954 134 aa9.08□□□□□ -0.96
TRIM35-201ENST00000305364 TRBV10-3A0A0K0K1G6 114 aa9.07□□□□□ -0.96
TRIM35-201ENST00000305364 KLK12Q9UKR0 248 aa9.07□□□□□ -0.96
TRIM35-201ENST00000305364 IGHV4-28A0A0C4DH34 117 aa9.07□□□□□ -0.96
TRIM35-201ENST00000305364 IGSF10Q6WRI0 2623 aa9.07□□□□□ -0.96
TRIM35-201ENST00000305364 COX7BP24311 80 aa9.07□□□□□ -0.96
TRIM35-201ENST00000305364 LINC00575Q6W349 94 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms