RNA–Protein interactions for RNA: ENST00000301810.11

ACAA1-201, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene ACAA1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-201ENST00000301810 PCP2Q8IVA1 136 aa12.52□□□□□ -0.4
ACAA1-201ENST00000301810 NDUFA1O15239 70 aa12.52□□□□□ -0.41
ACAA1-201ENST00000301810 ZNF625Q96I27 306 aaPredicted RBP12.52□□□□□ -0.41
ACAA1-201ENST00000301810 C12orf57Q99622 126 aa12.52□□□□□ -0.41
ACAA1-201ENST00000301810 EREGO14944 169 aa12.51□□□□□ -0.41
ACAA1-201ENST00000301810 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
ACAA1-201ENST00000301810 FRAS1Q86XX4 4008 aa12.5□□□□□ -0.41
ACAA1-201ENST00000301810 ZNF815PA8K554 130 aa12.5□□□□□ -0.41
ACAA1-201ENST00000301810 SLPIP03973 132 aa12.5□□□□□ -0.41
ACAA1-201ENST00000301810 SYCNQ0VAF6 134 aa12.5□□□□□ -0.41
ACAA1-201ENST00000301810 C10orf25Q5T742 122 aa12.5□□□□□ -0.41
ACAA1-201ENST00000301810 SFTA2Q6UW10 78 aa12.5□□□□□ -0.41
ACAA1-201ENST00000301810 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
ACAA1-201ENST00000301810 F8WDY8 70 aa12.49□□□□□ -0.41
ACAA1-201ENST00000301810 Q6ZRU5 148 aa12.49□□□□□ -0.41
ACAA1-201ENST00000301810 LINC00336Q6ZUF6 198 aa12.49□□□□□ -0.41
ACAA1-201ENST00000301810 CARD19Q96LW7 228 aa12.49□□□□□ -0.41
ACAA1-201ENST00000301810 C14orf144Q96I85 54 aa12.48□□□□□ -0.41
ACAA1-201ENST00000301810 COX8AP10176 69 aa12.47□□□□□ -0.41
ACAA1-201ENST00000301810 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
ACAA1-201ENST00000301810 LINC00518Q8N0U6 118 aa12.47□□□□□ -0.41
ACAA1-201ENST00000301810 TP73-AS1Q9UF72 201 aa12.47□□□□□ -0.41
ACAA1-201ENST00000301810 HERV-K104P63124 156 aa12.47□□□□□ -0.41
ACAA1-201ENST00000301810 C6orf48Q9UBA6 75 aa12.47□□□□□ -0.41
ACAA1-201ENST00000301810 DNAH17Q9UFH2 4485 aa12.46□□□□□ -0.42
ACAA1-201ENST00000301810 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.45□□□□□ -0.42
ACAA1-201ENST00000301810 TRBV30A0A0K0K1B3 111 aa12.45□□□□□ -0.42
ACAA1-201ENST00000301810 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
ACAA1-201ENST00000301810 BOD1L2Q8IYS8 172 aa12.44□□□□□ -0.42
ACAA1-201ENST00000301810 A0A0J9YXY3 114 aa12.43□□□□□ -0.42
ACAA1-201ENST00000301810 FUSP35637 526 aaKnown RBP eCLIP12.43□□□□□ -0.42
ACAA1-201ENST00000301810 MEIG1Q5JSS6 88 aa12.43□□□□□ -0.42
ACAA1-201ENST00000301810 SLC25A34Q6PIV7 304 aa12.42□□□□□ -0.42
ACAA1-201ENST00000301810 SCGB1D4Q6XE38 83 aa12.42□□□□□ -0.42
ACAA1-201ENST00000301810 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
ACAA1-201ENST00000301810 PRO1933Q9H354 126 aa12.42□□□□□ -0.42
ACAA1-201ENST00000301810 DLEU1O43261 78 aa12.41□□□□□ -0.42
ACAA1-201ENST00000301810 PFN2P35080 140 aa12.41□□□□□ -0.42
ACAA1-201ENST00000301810 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
ACAA1-201ENST00000301810 IGLV5-52A0A0A0MRZ9 124 aa12.4□□□□□ -0.42
ACAA1-201ENST00000301810 KRTAP10-2P60368 255 aa12.4□□□□□ -0.42
ACAA1-201ENST00000301810 A0A0U1RRA0 63 aa12.39□□□□□ -0.43
ACAA1-201ENST00000301810 SMIM13P0DJ93 91 aa12.39□□□□□ -0.43
ACAA1-201ENST00000301810 C9orf163Q8N9P6 203 aa12.38□□□□□ -0.43
ACAA1-201ENST00000301810 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
ACAA1-201ENST00000301810 LINC00158P58513 81 aa12.37□□□□□ -0.43
ACAA1-201ENST00000301810 LINC01620Q4KN68 170 aa12.37□□□□□ -0.43
ACAA1-201ENST00000301810 UQCR10Q9UDW1 63 aa12.37□□□□□ -0.43
ACAA1-201ENST00000301810 FAT2Q9NYQ8 4349 aa12.37□□□□□ -0.43
ACAA1-201ENST00000301810 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
ACAA1-201ENST00000301810 COX17Q14061 63 aa12.37□□□□□ -0.43
ACAA1-201ENST00000301810 NDUFC2-KCTD14E9PQ53 114 aa12.36□□□□□ -0.43
ACAA1-201ENST00000301810 RPL18AQ02543 176 aaKnown RBP12.36□□□□□ -0.43
ACAA1-201ENST00000301810 RYR3Q15413 4870 aa12.35□□□□□ -0.43
ACAA1-201ENST00000301810 LOC107984640A0A0U1RRK4 108 aa12.35□□□□□ -0.43
ACAA1-201ENST00000301810 TIMM17BO60830 172 aa12.35□□□□□ -0.43
ACAA1-201ENST00000301810 LITAFQ99732 161 aa12.35□□□□□ -0.43
ACAA1-201ENST00000301810 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
ACAA1-201ENST00000301810 A0A1B0GVY2 172 aa12.34□□□□□ -0.43
ACAA1-201ENST00000301810 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
ACAA1-201ENST00000301810 TSTD3H0UI37 97 aa12.34□□□□□ -0.43
ACAA1-201ENST00000301810 TLX1NBP0CAT3 122 aa12.34□□□□□ -0.43
ACAA1-201ENST00000301810 C2orf91Q6ZV80 131 aa12.34□□□□□ -0.43
ACAA1-201ENST00000301810 DAND5Q8N907 189 aa12.34□□□□□ -0.43
ACAA1-201ENST00000301810 ADAMTSL4-AS1Q5T5F5 129 aa12.33□□□□□ -0.44
ACAA1-201ENST00000301810 Q6ZRP5 223 aa12.33□□□□□ -0.44
ACAA1-201ENST00000301810 MIR7-3HGQ8N6C7 128 aa12.33□□□□□ -0.44
ACAA1-201ENST00000301810 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
ACAA1-201ENST00000301810 GAGE2EQ4V326 116 aa12.32□□□□□ -0.44
ACAA1-201ENST00000301810 GAGE2DQ9UEU5 116 aa12.32□□□□□ -0.44
ACAA1-201ENST00000301810 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
ACAA1-201ENST00000301810 GAGE2BQ13066 116 aa12.31□□□□□ -0.44
ACAA1-201ENST00000301810 SDIM1Q6ZPB5 146 aa12.31□□□□□ -0.44
ACAA1-201ENST00000301810 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
ACAA1-201ENST00000301810 A0A096LNI7 61 aa12.3□□□□□ -0.44
ACAA1-201ENST00000301810 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
ACAA1-201ENST00000301810 NPC2P61916 151 aa12.29□□□□□ -0.44
ACAA1-201ENST00000301810 SPANXDQ9BXN6 97 aa12.29□□□□□ -0.44
ACAA1-201ENST00000301810 SND1-IT1Q9HBX3 110 aa12.29□□□□□ -0.44
ACAA1-201ENST00000301810 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
ACAA1-201ENST00000301810 SPANXB1Q9NS25 103 aaPredicted RBP12.29□□□□□ -0.44
ACAA1-201ENST00000301810 SPANXCQ9NY87 97 aa12.29□□□□□ -0.44
ACAA1-201ENST00000301810 PKD1P98161 4303 aa12.29□□□□□ -0.44
ACAA1-201ENST00000301810 GCSHP23434 173 aa12.28□□□□□ -0.44
ACAA1-201ENST00000301810 PTTG1IPP53801 180 aa12.28□□□□□ -0.44
ACAA1-201ENST00000301810 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
ACAA1-201ENST00000301810 HECTD4Q9Y4D8 3996 aa12.27□□□□□ -0.44
ACAA1-201ENST00000301810 IGKV2-24A0A0C4DH68 120 aa12.27□□□□□ -0.44
ACAA1-201ENST00000301810 C16orf90A8MZG2 172 aa12.27□□□□□ -0.44
ACAA1-201ENST00000301810 DNAH11Q96DT5 4516 aa12.27□□□□□ -0.45
ACAA1-201ENST00000301810 CHTF8P0CG12 524 aa12.27□□□□□ -0.45
ACAA1-201ENST00000301810 HIST1H4GQ99525 98 aa12.26□□□□□ -0.45
ACAA1-201ENST00000301810 C9orf129Q5T035 196 aaKnown RBP12.25□□□□□ -0.45
ACAA1-201ENST00000301810 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
ACAA1-201ENST00000301810 Q6ZVH6 145 aa12.25□□□□□ -0.45
ACAA1-201ENST00000301810 LINC00308Q8TCZ7 52 aa12.25□□□□□ -0.45
ACAA1-201ENST00000301810 EIF4EBP3O60516 100 aaPredicted RBP12.24□□□□□ -0.45
ACAA1-201ENST00000301810 IFITM1P13164 125 aa12.22□□□□□ -0.45
ACAA1-201ENST00000301810 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
ACAA1-201ENST00000301810 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms