RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 WFDC10AQ9H1F0 79 aa14.26□□□□□ -0.13
HPS6-201ENST00000299238 TIMM17BO60830 172 aa14.26□□□□□ -0.13
HPS6-201ENST00000299238 CIRBPQ14011 172 aaKnown RBP14.26□□□□□ -0.13
HPS6-201ENST00000299238 Q9H8V8 135 aa14.25□□□□□ -0.13
HPS6-201ENST00000299238 IGLV1-51P01701 117 aa14.24□□□□□ -0.13
HPS6-201ENST00000299238 F8WDY8 70 aa14.23□□□□□ -0.13
HPS6-201ENST00000299238 FN1P02751 2386 aaKnown RBP14.23□□□□□ -0.13
HPS6-201ENST00000299238 GIG44P09565 113 aaPredicted RBP14.23□□□□□ -0.13
HPS6-201ENST00000299238 NDUFA1O15239 70 aa14.22□□□□□ -0.13
HPS6-201ENST00000299238 CMC4P56277 68 aaPredicted RBP14.22□□□□□ -0.13
HPS6-201ENST00000299238 C20orf197Q8N268 126 aa14.22□□□□□ -0.13
HPS6-201ENST00000299238 TMEM243Q9BU79 118 aa14.22□□□□□ -0.13
HPS6-201ENST00000299238 K7EQD1 137 aa14.22□□□□□ -0.13
HPS6-201ENST00000299238 NTM-AS1Q6ZSK4 140 aa14.22□□□□□ -0.13
HPS6-201ENST00000299238 FASNP49327 2511 aaKnown RBP14.22□□□□□ -0.13
HPS6-201ENST00000299238 TRBV10-1A0A0K0K1A3 114 aa14.21□□□□□ -0.13
HPS6-201ENST00000299238 RPL28P46779 137 aaKnown RBP14.21□□□□□ -0.13
HPS6-201ENST00000299238 TRAV23DV6A0A075B6W5 121 aa14.21□□□□□ -0.14
HPS6-201ENST00000299238 GHRHP01286 108 aa14.21□□□□□ -0.14
HPS6-201ENST00000299238 SMR3AQ99954 134 aa14.21□□□□□ -0.14
HPS6-201ENST00000299238 NOP10Q9NPE3 64 aaKnown RBP14.21□□□□□ -0.14
HPS6-201ENST00000299238 A0A087WYN8 130 aa14.2□□□□□ -0.14
HPS6-201ENST00000299238 RPL36AP83881 106 aaKnown RBP14.2□□□□□ -0.14
HPS6-201ENST00000299238 LINC00242Q5T6M2 205 aa14.2□□□□□ -0.14
HPS6-201ENST00000299238 RPL36ALQ969Q0 106 aaKnown RBP14.2□□□□□ -0.14
HPS6-201ENST00000299238 C19orf73Q9NVV2 129 aa14.2□□□□□ -0.14
HPS6-201ENST00000299238 NBEAL2Q6ZNJ1 2754 aa14.19□□□□□ -0.14
HPS6-201ENST00000299238 IGLV5-39A0A0G2JS06 123 aa14.19□□□□□ -0.14
HPS6-201ENST00000299238 GCN1Q92616 2671 aaKnown RBP14.18□□□□□ -0.14
HPS6-201ENST00000299238 FAM236DA0A1B0GTK5 79 aa14.18□□□□□ -0.14
HPS6-201ENST00000299238 NCR3O14931 201 aa14.18□□□□□ -0.14
HPS6-201ENST00000299238 FAM236CP0DP71 79 aa14.18□□□□□ -0.14
HPS6-201ENST00000299238 FAM19A3Q7Z5A8 133 aa14.18□□□□□ -0.14
HPS6-201ENST00000299238 PLAC8L1A1L4L8 177 aa14.17□□□□□ -0.14
HPS6-201ENST00000299238 LOC100131303A0A0U1RQF7 123 aa14.16□□□□□ -0.14
HPS6-201ENST00000299238 NDUFC2O95298 119 aa14.16□□□□□ -0.14
HPS6-201ENST00000299238 HIVEP2P31629 2446 aa14.16□□□□□ -0.14
HPS6-201ENST00000299238 C16orf74Q96GX8 76 aa14.15□□□□□ -0.14
HPS6-201ENST00000299238 FAM19A1Q7Z5A9 133 aa14.15□□□□□ -0.14
HPS6-201ENST00000299238 SMIM1B2RUZ4 78 aa14.13□□□□□ -0.15
HPS6-201ENST00000299238 CDC42SE2Q9NRR3 84 aa14.13□□□□□ -0.15
HPS6-201ENST00000299238 CSNK1G2-AS1Q8NCQ2 148 aa14.13□□□□□ -0.15
HPS6-201ENST00000299238 EPM2AB3EWF7 344 aa14.12□□□□□ -0.15
HPS6-201ENST00000299238 XCL1P47992 114 aa14.12□□□□□ -0.15
HPS6-201ENST00000299238 KRTAP10-3P60369 221 aa14.12□□□□□ -0.15
HPS6-201ENST00000299238 FP248Q71RG6 208 aaPredicted RBP14.12□□□□□ -0.15
HPS6-201ENST00000299238 TRGV2A0A075B6R0 118 aa14.12□□□□□ -0.15
HPS6-201ENST00000299238 NDUFC2-KCTD14E9PQ53 114 aa14.12□□□□□ -0.15
HPS6-201ENST00000299238 SLPIP03973 132 aa14.11□□□□□ -0.15
HPS6-201ENST00000299238 IGKV3OR2-268A0A0C4DH90 116 aa14.11□□□□□ -0.15
HPS6-201ENST00000299238 A0A0U1RQV1 116 aa14.11□□□□□ -0.15
HPS6-201ENST00000299238 LINC00337Q8N6G1 96 aa14.1□□□□□ -0.15
HPS6-201ENST00000299238 SERP1Q9Y6X1 66 aa14.1□□□□□ -0.15
HPS6-201ENST00000299238 HECTD1Q9ULT8 2610 aa14.1□□□□□ -0.15
HPS6-201ENST00000299238 VWFP04275 2813 aa14.1□□□□□ -0.15
HPS6-201ENST00000299238 H7BZZ5 65 aa14.1□□□□□ -0.15
HPS6-201ENST00000299238 OBSCN-AS1Q96MR7 158 aa14.09□□□□□ -0.15
HPS6-201ENST00000299238 ENHOQ6UWT2 76 aa14.09□□□□□ -0.15
HPS6-201ENST00000299238 LY6G6DO95868 133 aa14.08□□□□□ -0.16
HPS6-201ENST00000299238 PF4P02776 101 aa14.08□□□□□ -0.16
HPS6-201ENST00000299238 LYPD5Q6UWN5 251 aa14.08□□□□□ -0.16
HPS6-201ENST00000299238 OVOL2Q9BRP0 275 aa14.08□□□□□ -0.16
HPS6-201ENST00000299238 UBE2L6O14933 153 aa14.08□□□□□ -0.16
HPS6-201ENST00000299238 SEC61GP60059 68 aa14.07□□□□□ -0.16
HPS6-201ENST00000299238 TRBV6-4A0A1B0GX49 114 aa14.07□□□□□ -0.16
HPS6-201ENST00000299238 LINC00474Q9P2X8 69 aa14.07□□□□□ -0.16
HPS6-201ENST00000299238 LECT2O14960 151 aa14.06□□□□□ -0.16
HPS6-201ENST00000299238 LINC00482Q8N8I6 264 aa14.06□□□□□ -0.16
HPS6-201ENST00000299238 SMIM11BQ8TCY0 68 aa14.06□□□□□ -0.16
HPS6-201ENST00000299238 NOTCH2Q04721 2471 aa14.05□□□□□ -0.16
HPS6-201ENST00000299238 IGKV2-28A0A075B6P5 120 aa14.05□□□□□ -0.16
HPS6-201ENST00000299238 IGKV2D-28P01615 120 aa14.05□□□□□ -0.16
HPS6-201ENST00000299238 CRPP02741 224 aa14.05□□□□□ -0.16
HPS6-201ENST00000299238 TRGV4A0A0C4DH28 118 aa14.04□□□□□ -0.16
HPS6-201ENST00000299238 MIR7-3HGQ8N6C7 128 aa14.04□□□□□ -0.16
HPS6-201ENST00000299238 BRK1Q8WUW1 75 aa14.03□□□□□ -0.16
HPS6-201ENST00000299238 SS18Q15532 418 aa14.03□□□□□ -0.16
HPS6-201ENST00000299238 SNURFQ9Y675 71 aa14.03□□□□□ -0.16
HPS6-201ENST00000299238 OTOGQ6ZRI0 2925 aa14.03□□□□□ -0.16
HPS6-201ENST00000299238 TOMM7Q9P0U1 55 aa14.02□□□□□ -0.16
HPS6-201ENST00000299238 COPS9Q8WXC6 57 aa14.01□□□□□ -0.17
HPS6-201ENST00000299238 IGLV4-60A0A075B6I1 120 aa14.01□□□□□ -0.17
HPS6-201ENST00000299238 TRAV13-2A0A0B4J235 113 aa14□□□□□ -0.17
HPS6-201ENST00000299238 RMI2Q96E14 147 aa13.99□□□□□ -0.17
HPS6-201ENST00000299238 V9GYY9 64 aa13.99□□□□□ -0.17
HPS6-201ENST00000299238 CCKP06307 115 aa13.98□□□□□ -0.17
HPS6-201ENST00000299238 DEFB130BP0DP73 79 aa13.98□□□□□ -0.17
HPS6-201ENST00000299238 DEFB130AP0DP74 79 aa13.98□□□□□ -0.17
HPS6-201ENST00000299238 INAFM1C9JVW0 142 aa13.98□□□□□ -0.17
HPS6-201ENST00000299238 SMIM26A0A096LP01 95 aa13.97□□□□□ -0.17
HPS6-201ENST00000299238 C1orf195Q5TG92 126 aa13.97□□□□□ -0.17
HPS6-201ENST00000299238 SND1-IT1Q9HBX3 110 aa13.97□□□□□ -0.17
HPS6-201ENST00000299238 NSD1Q96L73 2696 aaPredicted RBP13.97□□□□□ -0.17
HPS6-201ENST00000299238 TRBV6-8A0A0A6YYG3 113 aa13.97□□□□□ -0.17
HPS6-201ENST00000299238 SPATA3Q8NHX4 192 aa13.96□□□□□ -0.17
HPS6-201ENST00000299238 F8WEM9 126 aa13.94□□□□□ -0.18
HPS6-201ENST00000299238 COX7B2Q8TF08 81 aa13.93□□□□□ -0.18
HPS6-201ENST00000299238 TENM1Q9UKZ4 2725 aa13.92□□□□□ -0.18
HPS6-201ENST00000299238 IGHV3OR16-9A0A0B4J2B5 98 aa13.92□□□□□ -0.18
HPS6-201ENST00000299238 LINC00612Q8N6U2 182 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms