RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 UPK3BQ9BT76 320 aa11.07□□□□□ -0.64
UBAP1-201ENST00000297661 C14orf132Q9NPU4 83 aa11.07□□□□□ -0.64
UBAP1-201ENST00000297661 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
UBAP1-201ENST00000297661 TENM1Q9UKZ4 2725 aa11.06□□□□□ -0.64
UBAP1-201ENST00000297661 DNAJC9-AS1A6NH13 148 aa11.06□□□□□ -0.64
UBAP1-201ENST00000297661 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
UBAP1-201ENST00000297661 LINC00846Q9NV44 126 aa11.05□□□□□ -0.64
UBAP1-201ENST00000297661 SMIM1B2RUZ4 78 aa11.04□□□□□ -0.64
UBAP1-201ENST00000297661 Q6JHZ5 121 aa11.04□□□□□ -0.64
UBAP1-201ENST00000297661 NBEAL2Q6ZNJ1 2754 aa11.04□□□□□ -0.64
UBAP1-201ENST00000297661 STAB1Q9NY15 2570 aa11.04□□□□□ -0.64
UBAP1-201ENST00000297661 CCL24O00175 119 aa11.04□□□□□ -0.64
UBAP1-201ENST00000297661 RPL28P46779 137 aaKnown RBP11.03□□□□□ -0.64
UBAP1-201ENST00000297661 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
UBAP1-201ENST00000297661 LINC01561Q8N1V8 128 aa11.03□□□□□ -0.64
UBAP1-201ENST00000297661 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
UBAP1-201ENST00000297661 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
UBAP1-201ENST00000297661 NTM-AS1Q6ZSK4 140 aa11.02□□□□□ -0.64
UBAP1-201ENST00000297661 A0A087WYN8 130 aa11.01□□□□□ -0.65
UBAP1-201ENST00000297661 CRPP02741 224 aa11.01□□□□□ -0.65
UBAP1-201ENST00000297661 RPL35AP18077 110 aaKnown RBP11.01□□□□□ -0.65
UBAP1-201ENST00000297661 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
UBAP1-201ENST00000297661 LOC100131303A0A0U1RQF7 123 aa11.01□□□□□ -0.65
UBAP1-201ENST00000297661 LINC00337Q8N6G1 96 aa11□□□□□ -0.65
UBAP1-201ENST00000297661 PF4P02776 101 aa11□□□□□ -0.65
UBAP1-201ENST00000297661 HILS1P60008 231 aa11□□□□□ -0.65
UBAP1-201ENST00000297661 HRCT1Q6UXD1 115 aa11□□□□□ -0.65
UBAP1-201ENST00000297661 IGKV3OR2-268A0A0C4DH90 116 aa10.99□□□□□ -0.65
UBAP1-201ENST00000297661 K7EQD1 137 aa10.99□□□□□ -0.65
UBAP1-201ENST00000297661 Q5XG85 94 aa10.99□□□□□ -0.65
UBAP1-201ENST00000297661 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
UBAP1-201ENST00000297661 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
UBAP1-201ENST00000297661 OVOL2Q9BRP0 275 aa10.98□□□□□ -0.65
UBAP1-201ENST00000297661 OBSCN-AS1Q96MR7 158 aa10.98□□□□□ -0.65
UBAP1-201ENST00000297661 IGKV2-28A0A075B6P5 120 aa10.97□□□□□ -0.65
UBAP1-201ENST00000297661 IGKV2D-28P01615 120 aa10.97□□□□□ -0.65
UBAP1-201ENST00000297661 GIG44P09565 113 aaPredicted RBP10.97□□□□□ -0.65
UBAP1-201ENST00000297661 IL17DQ8TAD2 202 aa10.97□□□□□ -0.65
UBAP1-201ENST00000297661 SMIM11BQ8TCY0 68 aa10.97□□□□□ -0.65
UBAP1-201ENST00000297661 F5H768 121 aa10.96□□□□□ -0.65
UBAP1-201ENST00000297661 NCR3O14931 201 aa10.96□□□□□ -0.65
UBAP1-201ENST00000297661 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.66
UBAP1-201ENST00000297661 FHL2Q14192 279 aa10.95□□□□□ -0.66
UBAP1-201ENST00000297661 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
UBAP1-201ENST00000297661 FAM19A3Q7Z5A8 133 aa10.95□□□□□ -0.66
UBAP1-201ENST00000297661 MIR7-3HGQ8N6C7 128 aa10.95□□□□□ -0.66
UBAP1-201ENST00000297661 TRRAPQ9Y4A5 3859 aa10.94□□□□□ -0.66
UBAP1-201ENST00000297661 LECT2O14960 151 aa10.94□□□□□ -0.66
UBAP1-201ENST00000297661 KRTAP24-1Q3LI83 254 aa10.94□□□□□ -0.66
UBAP1-201ENST00000297661 VWFP04275 2813 aa10.94□□□□□ -0.66
UBAP1-201ENST00000297661 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
UBAP1-201ENST00000297661 CDC42SE2Q9NRR3 84 aa10.93□□□□□ -0.66
UBAP1-201ENST00000297661 H0YGX0 51 aa10.93□□□□□ -0.66
UBAP1-201ENST00000297661 UBE2L6O14933 153 aa10.92□□□□□ -0.66
UBAP1-201ENST00000297661 PLAC8L1A1L4L8 177 aa10.92□□□□□ -0.66
UBAP1-201ENST00000297661 SLPIP03973 132 aa10.92□□□□□ -0.66
UBAP1-201ENST00000297661 RNASE1P07998 156 aaKnown RBP10.92□□□□□ -0.66
UBAP1-201ENST00000297661 TMEM86BQ8N661 226 aa10.92□□□□□ -0.66
UBAP1-201ENST00000297661 GHRHP01286 108 aa10.91□□□□□ -0.66
UBAP1-201ENST00000297661 TOMM7Q9P0U1 55 aa10.9□□□□□ -0.66
UBAP1-201ENST00000297661 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
UBAP1-201ENST00000297661 WFDC9Q8NEX5 89 aa10.9□□□□□ -0.66
UBAP1-201ENST00000297661 MDFIQ99750 246 aa10.9□□□□□ -0.66
UBAP1-201ENST00000297661 TMEM243Q9BU79 118 aa10.89□□□□□ -0.67
UBAP1-201ENST00000297661 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
UBAP1-201ENST00000297661 TRAV23DV6A0A075B6W5 121 aa10.88□□□□□ -0.67
UBAP1-201ENST00000297661 LINC00158P58513 81 aa10.88□□□□□ -0.67
UBAP1-201ENST00000297661 IGLV4-60A0A075B6I1 120 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 NDUFC2O95298 119 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 CCKP06307 115 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 CCL18P55774 89 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 SS18Q15532 418 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 COX7B2Q8TF08 81 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 C19orf73Q9NVV2 129 aa10.87□□□□□ -0.67
UBAP1-201ENST00000297661 DEFB130BP0DP73 79 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 DEFB130AP0DP74 79 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 ORMDL1Q9P0S3 153 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 FAM19A1Q7Z5A9 133 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 C20orf197Q8N268 126 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 C16orf74Q96GX8 76 aa10.86□□□□□ -0.67
UBAP1-201ENST00000297661 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
UBAP1-201ENST00000297661 IGLV1-51P01701 117 aa10.84□□□□□ -0.67
UBAP1-201ENST00000297661 CSNK1G2-AS1Q8NCQ2 148 aa10.84□□□□□ -0.67
UBAP1-201ENST00000297661 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
UBAP1-201ENST00000297661 ENHOQ6UWT2 76 aa10.84□□□□□ -0.67
UBAP1-201ENST00000297661 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
UBAP1-201ENST00000297661 KRTAP10-3P60369 221 aa10.83□□□□□ -0.68
UBAP1-201ENST00000297661 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
UBAP1-201ENST00000297661 PAX4O43316 350 aa10.83□□□□□ -0.68
UBAP1-201ENST00000297661 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
UBAP1-201ENST00000297661 A0A096LPF7 62 aa10.82□□□□□ -0.68
UBAP1-201ENST00000297661 PFN2P35080 140 aa10.82□□□□□ -0.68
UBAP1-201ENST00000297661 ATP5EP2Q5VTU8 51 aa10.82□□□□□ -0.68
UBAP1-201ENST00000297661 XCL1P47992 114 aa10.81□□□□□ -0.68
UBAP1-201ENST00000297661 DNHD1Q96M86 4753 aa10.81□□□□□ -0.68
UBAP1-201ENST00000297661 CLPSL2Q6UWE3 100 aa10.81□□□□□ -0.68
UBAP1-201ENST00000297661 PKD1L1Q8TDX9 2849 aa10.81□□□□□ -0.68
UBAP1-201ENST00000297661 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
UBAP1-201ENST00000297661 TRBV6-8A0A0A6YYG3 113 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms