RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 NDUFC2O95298 119 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 COX17Q14061 63 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 NOTCH3Q9UM47 2321 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 C3orf56Q8N813 242 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 LINC00167Q96N53 147 aa10.28□□□□□ -0.76
CCT3-201ENST00000295688 C2CD3Q4AC94 2353 aa10.27□□□□□ -0.77
CCT3-201ENST00000295688 LRRK2Q5S007 2527 aa10.27□□□□□ -0.77
CCT3-201ENST00000295688 CSMD2Q7Z408 3487 aa10.27□□□□□ -0.77
CCT3-201ENST00000295688 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
CCT3-201ENST00000295688 C11orf68Q9H3H3 251 aaKnown RBP10.26□□□□□ -0.77
CCT3-201ENST00000295688 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
CCT3-201ENST00000295688 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
CCT3-201ENST00000295688 UBR5O95071 2799 aaPredicted RBP10.25□□□□□ -0.77
CCT3-201ENST00000295688 RPL18AQ02543 176 aaKnown RBP10.25□□□□□ -0.77
CCT3-201ENST00000295688 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
CCT3-201ENST00000295688 LINC00846Q9NV44 126 aa10.25□□□□□ -0.77
CCT3-201ENST00000295688 CENPEQ02224 2701 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 NCR3O14931 201 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 CCKP06307 115 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 RPS28P62857 69 aaKnown RBP10.24□□□□□ -0.77
CCT3-201ENST00000295688 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 EPG5Q9HCE0 2579 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 TMEM256-PLSCR3K7ERE1 68 aa10.24□□□□□ -0.77
CCT3-201ENST00000295688 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
CCT3-201ENST00000295688 SLPIP03973 132 aa10.23□□□□□ -0.77
CCT3-201ENST00000295688 LYRM9A8MSI8 78 aa10.22□□□□□ -0.77
CCT3-201ENST00000295688 Q8N814 137 aa10.22□□□□□ -0.77
CCT3-201ENST00000295688 IGHV4-28A0A0C4DH34 117 aa10.22□□□□□ -0.77
CCT3-201ENST00000295688 KRTAP1-1Q07627 177 aa10.21□□□□□ -0.77
CCT3-201ENST00000295688 KIAA0087Q14695 138 aa10.21□□□□□ -0.77
CCT3-201ENST00000295688 MUC7Q8TAX7 377 aa10.21□□□□□ -0.77
CCT3-201ENST00000295688 X6R8D5 127 aa10.21□□□□□ -0.77
CCT3-201ENST00000295688 IGKV3D-7A0A0C4DH55 119 aa10.21□□□□□ -0.78
CCT3-201ENST00000295688 J3KT08 172 aa10.21□□□□□ -0.78
CCT3-201ENST00000295688 HILS1P60008 231 aa10.21□□□□□ -0.78
CCT3-201ENST00000295688 UPK3BQ9BT76 320 aa10.21□□□□□ -0.78
CCT3-201ENST00000295688 NANOS2P60321 138 aaKnown RBP10.2□□□□□ -0.78
CCT3-201ENST00000295688 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
CCT3-201ENST00000295688 ITPR3Q14573 2671 aa10.2□□□□□ -0.78
CCT3-201ENST00000295688 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
CCT3-201ENST00000295688 SERP2Q8N6R1 65 aa10.19□□□□□ -0.78
CCT3-201ENST00000295688 SONP18583 2426 aaKnown RBP10.19□□□□□ -0.78
CCT3-201ENST00000295688 ATP5EP2Q5VTU8 51 aa10.19□□□□□ -0.78
CCT3-201ENST00000295688 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
CCT3-201ENST00000295688 CHCHD10Q8WYQ3 142 aaPredicted RBP10.19□□□□□ -0.78
CCT3-201ENST00000295688 JMJD1CQ15652 2540 aa10.18□□□□□ -0.78
CCT3-201ENST00000295688 LINC00482Q8N8I6 264 aa10.17□□□□□ -0.78
CCT3-201ENST00000295688 A0A096LPF7 62 aa10.16□□□□□ -0.78
CCT3-201ENST00000295688 ANGP03950 147 aaKnown RBP10.16□□□□□ -0.78
CCT3-201ENST00000295688 REG3AQ06141 175 aa10.16□□□□□ -0.78
CCT3-201ENST00000295688 TMEM258P61165 79 aa10.16□□□□□ -0.78
CCT3-201ENST00000295688 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
CCT3-201ENST00000295688 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
CCT3-201ENST00000295688 LYPD5Q6UWN5 251 aa10.15□□□□□ -0.78
CCT3-201ENST00000295688 APCP25054 2843 aa10.15□□□□□ -0.78
CCT3-201ENST00000295688 USP24Q9UPU5 2620 aa10.14□□□□□ -0.79
CCT3-201ENST00000295688 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
CCT3-201ENST00000295688 CYSTM1Q9H1C7 97 aa10.14□□□□□ -0.79
CCT3-201ENST00000295688 H3BQ85 93 aa10.13□□□□□ -0.79
CCT3-201ENST00000295688 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
CCT3-201ENST00000295688 LOC107984640A0A0U1RRK4 108 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 LINC00575Q6W349 94 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 ZFYVE26Q68DK2 2539 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 IGLV10-54A0A075B6I4 117 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 DAD1P61803 113 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 C9orf66Q5T8R8 295 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 UBL5Q9BZL1 73 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 NF1P21359 2839 aa10.12□□□□□ -0.79
CCT3-201ENST00000295688 APOC4P55056 127 aa10.11□□□□□ -0.79
CCT3-201ENST00000295688 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
CCT3-201ENST00000295688 A0A087WVE0 104 aa10.11□□□□□ -0.79
CCT3-201ENST00000295688 FAM19A5Q7Z5A7 132 aaPredicted RBP10.11□□□□□ -0.79
CCT3-201ENST00000295688 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
CCT3-201ENST00000295688 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
CCT3-201ENST00000295688 IGHV4-30-4P0DP06 118 aa10.09□□□□□ -0.79
CCT3-201ENST00000295688 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
CCT3-201ENST00000295688 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
CCT3-201ENST00000295688 KRTAP10-3P60369 221 aa10.09□□□□□ -0.79
CCT3-201ENST00000295688 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
CCT3-201ENST00000295688 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
CCT3-201ENST00000295688 LELP1Q5T871 98 aa10.08□□□□□ -0.8
CCT3-201ENST00000295688 DPH3Q96FX2 82 aa10.08□□□□□ -0.8
CCT3-201ENST00000295688 LOC110117498A0A087WWA1 95 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 MIFP14174 115 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 PDE6GP18545 87 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 DEFB135Q30KP9 77 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 C5orf47Q569G3 176 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 C6orf223Q8N319 242 aa10.07□□□□□ -0.8
CCT3-201ENST00000295688 SETD2Q9BYW2 2564 aaPredicted RBP10.06□□□□□ -0.8
CCT3-201ENST00000295688 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
CCT3-201ENST00000295688 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
CCT3-201ENST00000295688 BCE1O60756 84 aa10.05□□□□□ -0.8
CCT3-201ENST00000295688 Q6ZQT0 140 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms