RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
NPC1-201ENST00000269228 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
NPC1-201ENST00000269228 A0A096LNJ9 63 aa9.7□□□□□ -0.86
NPC1-201ENST00000269228 CCDC179H3BU77 68 aa9.7□□□□□ -0.86
NPC1-201ENST00000269228 AMELXQ99217 191 aa9.7□□□□□ -0.86
NPC1-201ENST00000269228 USP24Q9UPU5 2620 aa9.7□□□□□ -0.86
NPC1-201ENST00000269228 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
NPC1-201ENST00000269228 EGFEM1PQ0D2K5 195 aa9.69□□□□□ -0.86
NPC1-201ENST00000269228 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
NPC1-201ENST00000269228 NHLRC4P0CG21 123 aaPredicted RBP9.69□□□□□ -0.86
NPC1-201ENST00000269228 XGP55808 180 aa9.69□□□□□ -0.86
NPC1-201ENST00000269228 MGAM2Q2M2H8 2515 aa9.68□□□□□ -0.86
NPC1-201ENST00000269228 SVIPQ8NHG7 77 aa9.68□□□□□ -0.86
NPC1-201ENST00000269228 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
NPC1-201ENST00000269228 C6orf223Q8N319 242 aa9.68□□□□□ -0.86
NPC1-201ENST00000269228 BPY2O14599 106 aa9.67□□□□□ -0.86
NPC1-201ENST00000269228 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
NPC1-201ENST00000269228 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
NPC1-201ENST00000269228 LINC00474Q9P2X8 69 aa9.67□□□□□ -0.86
NPC1-201ENST00000269228 TSPEAR-AS2P59090 65 aa9.67□□□□□ -0.86
NPC1-201ENST00000269228 MP68P56378 58 aa9.66□□□□□ -0.86
NPC1-201ENST00000269228 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
NPC1-201ENST00000269228 MUC7Q8TAX7 377 aa9.66□□□□□ -0.86
NPC1-201ENST00000269228 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
NPC1-201ENST00000269228 V9GYY9 64 aa9.65□□□□□ -0.86
NPC1-201ENST00000269228 LINC00643Q86TS7 51 aa9.65□□□□□ -0.86
NPC1-201ENST00000269228 FLNAP21333 2647 aaKnown RBP9.65□□□□□ -0.86
NPC1-201ENST00000269228 UQCRQO14949 82 aa9.65□□□□□ -0.87
NPC1-201ENST00000269228 CCKP06307 115 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 A0A096LNT2 108 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 M0QXV9 152 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 SBSPONQ8IVN8 264 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 ZNF292O60281 2723 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 SDIM1Q6ZPB5 146 aa9.64□□□□□ -0.87
NPC1-201ENST00000269228 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
NPC1-201ENST00000269228 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
NPC1-201ENST00000269228 SCXQ7RTU7 201 aa9.63□□□□□ -0.87
NPC1-201ENST00000269228 X6R8D5 127 aa9.63□□□□□ -0.87
NPC1-201ENST00000269228 MUC4Q99102 2169 aa9.63□□□□□ -0.87
NPC1-201ENST00000269228 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
NPC1-201ENST00000269228 A0A0C4DFX4 3053 aa9.62□□□□□ -0.87
NPC1-201ENST00000269228 LINC00315P59091 139 aa9.62□□□□□ -0.87
NPC1-201ENST00000269228 C1orf134Q5TEV5 83 aa9.62□□□□□ -0.87
NPC1-201ENST00000269228 LST1O00453 97 aa9.62□□□□□ -0.87
NPC1-201ENST00000269228 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
NPC1-201ENST00000269228 PRUNE2Q8WUY3 3088 aa9.61□□□□□ -0.87
NPC1-201ENST00000269228 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
NPC1-201ENST00000269228 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
NPC1-201ENST00000269228 C3orf22Q8N5N4 141 aa9.61□□□□□ -0.87
NPC1-201ENST00000269228 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
NPC1-201ENST00000269228 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
NPC1-201ENST00000269228 ZNF706Q9Y5V0 76 aaPredicted RBP9.61□□□□□ -0.87
NPC1-201ENST00000269228 WFDC9Q8NEX5 89 aa9.6□□□□□ -0.87
NPC1-201ENST00000269228 KLK9Q2XQG4 91 aa9.6□□□□□ -0.87
NPC1-201ENST00000269228 CHKB-CPT1BH3BT56 60 aa9.59□□□□□ -0.87
NPC1-201ENST00000269228 ESRGQ1W209 222 aa9.59□□□□□ -0.87
NPC1-201ENST00000269228 HRCT1Q6UXD1 115 aa9.59□□□□□ -0.87
NPC1-201ENST00000269228 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
NPC1-201ENST00000269228 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
NPC1-201ENST00000269228 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
NPC1-201ENST00000269228 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
NPC1-201ENST00000269228 SPINK6Q6UWN8 80 aa9.58□□□□□ -0.88
NPC1-201ENST00000269228 Q9UF83 564 aa9.58□□□□□ -0.88
NPC1-201ENST00000269228 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
NPC1-201ENST00000269228 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
NPC1-201ENST00000269228 MDFIQ99750 246 aa9.57□□□□□ -0.88
NPC1-201ENST00000269228 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
NPC1-201ENST00000269228 BPTFQ12830 3046 aa9.56□□□□□ -0.88
NPC1-201ENST00000269228 ATRQ13535 2644 aa9.56□□□□□ -0.88
NPC1-201ENST00000269228 Q6ZRU5 148 aa9.56□□□□□ -0.88
NPC1-201ENST00000269228 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.56□□□□□ -0.88
NPC1-201ENST00000269228 MAST4O15021 2626 aa9.56□□□□□ -0.88
NPC1-201ENST00000269228 IGKV4-1P06312 121 aa9.54□□□□□ -0.88
NPC1-201ENST00000269228 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
NPC1-201ENST00000269228 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
NPC1-201ENST00000269228 RPL28P46779 137 aaKnown RBP9.54□□□□□ -0.88
NPC1-201ENST00000269228 MGAQ8IWI9 3026 aa9.54□□□□□ -0.88
NPC1-201ENST00000269228 LINC01556Q5JQF7 62 aa9.53□□□□□ -0.88
NPC1-201ENST00000269228 Q8NAQ8 132 aa9.53□□□□□ -0.88
NPC1-201ENST00000269228 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
NPC1-201ENST00000269228 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
NPC1-201ENST00000269228 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.89
NPC1-201ENST00000269228 IGHV3OR16-9A0A0B4J2B5 98 aa9.51□□□□□ -0.89
NPC1-201ENST00000269228 F8WDY8 70 aa9.51□□□□□ -0.89
NPC1-201ENST00000269228 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
NPC1-201ENST00000269228 Q8N814 137 aa9.5□□□□□ -0.89
NPC1-201ENST00000269228 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
NPC1-201ENST00000269228 H3BNG1 76 aa9.49□□□□□ -0.89
NPC1-201ENST00000269228 SEC61GP60059 68 aa9.49□□□□□ -0.89
NPC1-201ENST00000269228 ATP5EP56381 51 aaPredicted RBP9.48□□□□□ -0.89
NPC1-201ENST00000269228 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
NPC1-201ENST00000269228 A0A087WYN8 130 aa9.48□□□□□ -0.89
NPC1-201ENST00000269228 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
NPC1-201ENST00000269228 Q8N3U1 123 aa9.48□□□□□ -0.89
NPC1-201ENST00000269228 C10orf25Q5T742 122 aa9.47□□□□□ -0.89
NPC1-201ENST00000269228 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
NPC1-201ENST00000269228 SPTSSBQ8NFR3 76 aa9.47□□□□□ -0.89
NPC1-201ENST00000269228 KRTAP10-3P60369 221 aa9.47□□□□□ -0.89
NPC1-201ENST00000269228 COX7CP15954 63 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms