RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 HECTD1Q9ULT8 2610 aa11.49□□□□□ -0.57
PCNP-201ENST00000265260 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
PCNP-201ENST00000265260 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
PCNP-201ENST00000265260 C11orf44Q8N8P7 122 aa11.48□□□□□ -0.57
PCNP-201ENST00000265260 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
PCNP-201ENST00000265260 C6orf226Q5I0X4 101 aa11.47□□□□□ -0.57
PCNP-201ENST00000265260 LINC01547P58512 204 aaPredicted RBP11.47□□□□□ -0.57
PCNP-201ENST00000265260 DEFB114Q30KQ6 69 aa11.47□□□□□ -0.57
PCNP-201ENST00000265260 ZNF702PQ9H963 129 aa11.47□□□□□ -0.57
PCNP-201ENST00000265260 DEFB136Q30KP8 78 aa11.46□□□□□ -0.57
PCNP-201ENST00000265260 C18orf65Q6ZTR6 163 aa11.46□□□□□ -0.57
PCNP-201ENST00000265260 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.46□□□□□ -0.582e-6■■□□□ 12.2
PCNP-201ENST00000265260 B4DSR2 109 aa11.45□□□□□ -0.58
PCNP-201ENST00000265260 J3QLI3 93 aa11.45□□□□□ -0.58
PCNP-201ENST00000265260 NDUFC1O43677 76 aa11.45□□□□□ -0.58
PCNP-201ENST00000265260 RBM3P98179 157 aaKnown RBP11.45□□□□□ -0.58
PCNP-201ENST00000265260 Q8IZM0 81 aa11.45□□□□□ -0.58
PCNP-201ENST00000265260 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
PCNP-201ENST00000265260 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
PCNP-201ENST00000265260 TRAV10A0A0B4J240 114 aa11.44□□□□□ -0.58
PCNP-201ENST00000265260 LOC100131303A0A0U1RQF7 123 aa11.44□□□□□ -0.58
PCNP-201ENST00000265260 LINC00959A0A1B0GUT2 108 aa11.44□□□□□ -0.58
PCNP-201ENST00000265260 C19orf84I3L1E1 186 aa11.44□□□□□ -0.58
PCNP-201ENST00000265260 C6orf223Q8N319 242 aa11.44□□□□□ -0.58
PCNP-201ENST00000265260 FLNBO75369 2602 aaKnown RBP11.44□□□□□ -0.58
PCNP-201ENST00000265260 ZNF561-AS1K7EIQ3 104 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 CXCL6P80162 114 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 ODF3L2Q3SX64 289 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 CRYBG3Q68DQ2 2970 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 RMI2Q96E14 147 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 F8WEM9 126 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 ATP5EP56381 51 aaPredicted RBP11.43□□□□□ -0.58
PCNP-201ENST00000265260 LINC00575Q6W349 94 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 Q6ZVQ6 151 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 STHQ8IWL8 128 aa11.43□□□□□ -0.58
PCNP-201ENST00000265260 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
PCNP-201ENST00000265260 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
PCNP-201ENST00000265260 AKAP6Q13023 2319 aa11.42□□□□□ -0.58
PCNP-201ENST00000265260 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
PCNP-201ENST00000265260 SNURFQ9Y675 71 aa11.42□□□□□ -0.58
PCNP-201ENST00000265260 CCL19Q99731 98 aa11.41□□□□□ -0.58
PCNP-201ENST00000265260 CSMD2Q7Z408 3487 aa11.4□□□□□ -0.58
PCNP-201ENST00000265260 C11orf68Q9H3H3 251 aaKnown RBP11.4□□□□□ -0.58
PCNP-201ENST00000265260 SETXQ7Z333 2677 aaKnown RBP11.4□□□□□ -0.59
PCNP-201ENST00000265260 PTPN13Q12923 2485 aa11.4□□□□□ -0.59
PCNP-201ENST00000265260 PDE6GP18545 87 aa11.4□□□□□ -0.59
PCNP-201ENST00000265260 COX17Q14061 63 aa11.4□□□□□ -0.59
PCNP-201ENST00000265260 C9orf66Q5T8R8 295 aa11.4□□□□□ -0.59
PCNP-201ENST00000265260 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.59
PCNP-201ENST00000265260 TRBV7-6A0A0J9YX20 115 aa11.39□□□□□ -0.59
PCNP-201ENST00000265260 PLAC8L1A1L4L8 177 aa11.39□□□□□ -0.59
PCNP-201ENST00000265260 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
PCNP-201ENST00000265260 C4orf3Q8WVX3 66 aa11.39□□□□□ -0.59
PCNP-201ENST00000265260 CENPEQ02224 2701 aa11.39□□□□□ -0.59
PCNP-201ENST00000265260 M0R2N4 97 aa11.38□□□□□ -0.59
PCNP-201ENST00000265260 HAMPP81172 84 aa11.38□□□□□ -0.59
PCNP-201ENST00000265260 RNASE1P07998 156 aaKnown RBP11.38□□□□□ -0.59
PCNP-201ENST00000265260 DOPEY1Q5JWR5 2465 aa11.38□□□□□ -0.59
PCNP-201ENST00000265260 TRBV7-4A0A0J9YYF1 115 aa11.37□□□□□ -0.59
PCNP-201ENST00000265260 TRGV2A0A075B6R0 118 aa11.37□□□□□ -0.59
PCNP-201ENST00000265260 F8WDY8 70 aa11.37□□□□□ -0.59
PCNP-201ENST00000265260 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
PCNP-201ENST00000265260 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
PCNP-201ENST00000265260 H3BQ85 93 aa11.36□□□□□ -0.59
PCNP-201ENST00000265260 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
PCNP-201ENST00000265260 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
PCNP-201ENST00000265260 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
PCNP-201ENST00000265260 Q6YL49 198 aa11.35□□□□□ -0.59
PCNP-201ENST00000265260 Q8N3U1 123 aa11.35□□□□□ -0.59
PCNP-201ENST00000265260 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
PCNP-201ENST00000265260 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
PCNP-201ENST00000265260 LINC00474Q9P2X8 69 aa11.34□□□□□ -0.59
PCNP-201ENST00000265260 IGHV4-28A0A0C4DH34 117 aa11.34□□□□□ -0.59
PCNP-201ENST00000265260 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
PCNP-201ENST00000265260 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
PCNP-201ENST00000265260 MIFP14174 115 aa11.33□□□□□ -0.6
PCNP-201ENST00000265260 WFDC11Q8NEX6 87 aa11.33□□□□□ -0.6
PCNP-201ENST00000265260 TM2D3Q9BRN9 247 aa11.33□□□□□ -0.6
PCNP-201ENST00000265260 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
PCNP-201ENST00000265260 LINC01356Q8N9X3 169 aa11.32□□□□□ -0.6
PCNP-201ENST00000265260 Q8NDZ9 215 aa11.31□□□□□ -0.6
PCNP-201ENST00000265260 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
PCNP-201ENST00000265260 PKIGQ9Y2B9 76 aa11.3□□□□□ -0.6
PCNP-201ENST00000265260 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
PCNP-201ENST00000265260 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
PCNP-201ENST00000265260 FBN2P35556 2912 aa11.29□□□□□ -0.6
PCNP-201ENST00000265260 KHDC1LQ5JSQ8 128 aa11.29□□□□□ -0.6
PCNP-201ENST00000265260 CYSRT1A8MQ03 144 aa11.29□□□□□ -0.6
PCNP-201ENST00000265260 FSHBP01225 129 aa11.29□□□□□ -0.6
PCNP-201ENST00000265260 DSCR9P59020 149 aa11.29□□□□□ -0.6
PCNP-201ENST00000265260 SPATA3Q8NHX4 192 aa11.29□□□□□ -0.6
PCNP-201ENST00000265260 NREPQ16612 68 aa11.28□□□□□ -0.6
PCNP-201ENST00000265260 TMEM254Q8TBM7 123 aa11.27□□□□□ -0.61
PCNP-201ENST00000265260 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
PCNP-201ENST00000265260 Q6ZQY7 126 aa11.26□□□□□ -0.61
PCNP-201ENST00000265260 CD164L2Q6UWJ8 174 aa11.25□□□□□ -0.61
PCNP-201ENST00000265260 NOTCH2Q04721 2471 aa11.25□□□□□ -0.61
PCNP-201ENST00000265260 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
PCNP-201ENST00000265260 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
PCNP-201ENST00000265260 BRK1Q8WUW1 75 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms