RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
MSH3-201ENST00000265081 TEX49A0A1B0GTD5 131 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 CXCL5P42830 114 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 LELP1Q5T871 98 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 FAM218AQ96MZ4 157 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 DAD1P61803 113 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 C2orf82Q6UX34 121 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
MSH3-201ENST00000265081 NDUFC2O95298 119 aa7.6□□□□□ -1.19
MSH3-201ENST00000265081 SPART-AS1P0CW21 52 aa7.6□□□□□ -1.19
MSH3-201ENST00000265081 MRPL23Q16540 153 aaKnown RBP7.6□□□□□ -1.19
MSH3-201ENST00000265081 C5orf38Q86SI9 138 aa7.6□□□□□ -1.19
MSH3-201ENST00000265081 KLK5Q9Y337 293 aaPredicted RBP7.6□□□□□ -1.19
MSH3-201ENST00000265081 A0A096LPF7 62 aa7.59□□□□□ -1.19
MSH3-201ENST00000265081 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
MSH3-201ENST00000265081 C11orf68Q9H3H3 251 aaKnown RBP7.59□□□□□ -1.19
MSH3-201ENST00000265081 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
MSH3-201ENST00000265081 MT-ATP8P03928 68 aa7.59□□□□□ -1.19
MSH3-201ENST00000265081 HIVEP2P31629 2446 aa7.59□□□□□ -1.2
MSH3-201ENST00000265081 KRTAP10-11P60412 298 aa7.58□□□□□ -1.2
MSH3-201ENST00000265081 REG3AQ06141 175 aa7.58□□□□□ -1.2
MSH3-201ENST00000265081 LINC00269Q8N2A0 174 aa7.58□□□□□ -1.2
MSH3-201ENST00000265081 CHCHD10Q8WYQ3 142 aaPredicted RBP7.58□□□□□ -1.2
MSH3-201ENST00000265081 CRPP02741 224 aa7.58□□□□□ -1.2
MSH3-201ENST00000265081 JMJD1CQ15652 2540 aa7.58□□□□□ -1.2
MSH3-201ENST00000265081 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
MSH3-201ENST00000265081 FN1P02751 2386 aaKnown RBP7.58□□□□□ -1.2
MSH3-201ENST00000265081 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 XCL1P47992 114 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 SMIM11BQ8TCY0 68 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
MSH3-201ENST00000265081 NANOS2P60321 138 aaKnown RBP7.57□□□□□ -1.2
MSH3-201ENST00000265081 Q6Q795 121 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 Q8N3U1 123 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 CFAP161Q6P656 301 aa7.57□□□□□ -1.2
MSH3-201ENST00000265081 MTORP42345 2549 aa7.56□□□□□ -1.2
MSH3-201ENST00000265081 A0A0J9YWU9 116 aa7.56□□□□□ -1.2
MSH3-201ENST00000265081 DEFB4AO15263 64 aa7.56□□□□□ -1.2
MSH3-201ENST00000265081 LINC00158P58513 81 aa7.56□□□□□ -1.2
MSH3-201ENST00000265081 TOMM7Q9P0U1 55 aa7.56□□□□□ -1.2
MSH3-201ENST00000265081 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
MSH3-201ENST00000265081 H0YGX0 51 aa7.55□□□□□ -1.2
MSH3-201ENST00000265081 KRTAP26-1Q6PEX3 210 aa7.55□□□□□ -1.2
MSH3-201ENST00000265081 SETD2Q9BYW2 2564 aaPredicted RBP7.55□□□□□ -1.2
MSH3-201ENST00000265081 C6orf226Q5I0X4 101 aa7.55□□□□□ -1.2
MSH3-201ENST00000265081 LYPD5Q6UWN5 251 aa7.55□□□□□ -1.2
MSH3-201ENST00000265081 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
MSH3-201ENST00000265081 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
MSH3-201ENST00000265081 A0A1B0GX51 115 aa7.54□□□□□ -1.2
MSH3-201ENST00000265081 ACYP1P07311 99 aa7.53□□□□□ -1.2
MSH3-201ENST00000265081 NOTCH2Q04721 2471 aa7.53□□□□□ -1.2
MSH3-201ENST00000265081 A0A087WYN8 130 aa7.52□□□□□ -1.2
MSH3-201ENST00000265081 TEP1Q99973 2627 aaKnown RBP7.52□□□□□ -1.21
MSH3-201ENST00000265081 C2CD3Q4AC94 2353 aa7.52□□□□□ -1.21
MSH3-201ENST00000265081 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
MSH3-201ENST00000265081 Q8NDZ9 215 aa7.52□□□□□ -1.21
MSH3-201ENST00000265081 KRTAP24-1Q3LI83 254 aa7.52□□□□□ -1.21
MSH3-201ENST00000265081 CLPSL2Q6UWE3 100 aa7.51□□□□□ -1.21
MSH3-201ENST00000265081 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
MSH3-201ENST00000265081 PFN2P35080 140 aa7.51□□□□□ -1.21
MSH3-201ENST00000265081 MALP21145 153 aa7.51□□□□□ -1.21
MSH3-201ENST00000265081 TRBV7-7A0A0K0K1E9 115 aa7.5□□□□□ -1.21
MSH3-201ENST00000265081 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
MSH3-201ENST00000265081 CKS1BP61024 79 aa7.49□□□□□ -1.21
MSH3-201ENST00000265081 HECTD1Q9ULT8 2610 aa7.48□□□□□ -1.21
MSH3-201ENST00000265081 IGLV6-57P01721 117 aa7.47□□□□□ -1.21
MSH3-201ENST00000265081 C10orf25Q5T742 122 aa7.47□□□□□ -1.21
MSH3-201ENST00000265081 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
MSH3-201ENST00000265081 F8WDY8 70 aa7.46□□□□□ -1.21
MSH3-201ENST00000265081 INAFM2P0DMQ5 153 aa7.46□□□□□ -1.21
MSH3-201ENST00000265081 SMCR5Q8TEV8 140 aa7.46□□□□□ -1.21
MSH3-201ENST00000265081 TMEM126AQ9H061 195 aa7.46□□□□□ -1.21
MSH3-201ENST00000265081 IGLV10-54A0A075B6I4 117 aa7.46□□□□□ -1.22
MSH3-201ENST00000265081 SPAG11BQ08648 103 aa7.46□□□□□ -1.22
MSH3-201ENST00000265081 FBN1P35555 2871 aaKnown RBP7.46□□□□□ -1.22
MSH3-201ENST00000265081 NBEAL2Q6ZNJ1 2754 aa7.46□□□□□ -1.22
MSH3-201ENST00000265081 KPRPQ5T749 579 aaPredicted RBP7.46□□□□□ -1.22
MSH3-201ENST00000265081 A0A1B0GV72 72 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 C15orf53Q8NAA6 179 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 IMUPQ9GZP8 106 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 RETNQ9HD89 108 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 CYSRT1A8MQ03 144 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 C9orf116Q5BN46 136 aaPredicted RBP7.45□□□□□ -1.22
MSH3-201ENST00000265081 C6orf223Q8N319 242 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 Q9HAA7 133 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
MSH3-201ENST00000265081 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
MSH3-201ENST00000265081 NHLRC4P0CG21 123 aaPredicted RBP7.44□□□□□ -1.22
MSH3-201ENST00000265081 Q6ZTC4 211 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 Q8N814 137 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 C6orf48Q9UBA6 75 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 SNCGO76070 127 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 KLK12Q9UKR0 248 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 WFDC10BQ8IUB3 73 aa7.44□□□□□ -1.22
MSH3-201ENST00000265081 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
MSH3-201ENST00000265081 C2orf48Q96LS8 159 aa7.43□□□□□ -1.22
MSH3-201ENST00000265081 LECT2O14960 151 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms