RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ITPR3Q14573 2671 aa5.9□□□□□ -1.46
PTPN3-201ENST00000262539 IGLV5-45A0A087WSX0 123 aa5.9□□□□□ -1.46
PTPN3-201ENST00000262539 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.46
PTPN3-201ENST00000262539 TMEM223A0PJW6 202 aa5.9□□□□□ -1.46
PTPN3-201ENST00000262539 TNRC18O15417 2968 aaPredicted RBP5.9□□□□□ -1.46
PTPN3-201ENST00000262539 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.47
PTPN3-201ENST00000262539 PDE6GP18545 87 aa5.9□□□□□ -1.47
PTPN3-201ENST00000262539 TRAV23DV6A0A075B6W5 121 aa5.9□□□□□ -1.47
PTPN3-201ENST00000262539 IBA57-AS1B1ANH7 110 aa5.9□□□□□ -1.47
PTPN3-201ENST00000262539 C3orf84H3BNL1 204 aa5.89□□□□□ -1.47
PTPN3-201ENST00000262539 ATOX1O00244 68 aa5.89□□□□□ -1.47
PTPN3-201ENST00000262539 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
PTPN3-201ENST00000262539 SLPIP03973 132 aa5.89□□□□□ -1.47
PTPN3-201ENST00000262539 RPL28P46779 137 aaKnown RBP5.89□□□□□ -1.47
PTPN3-201ENST00000262539 FAM19A3Q7Z5A8 133 aa5.89□□□□□ -1.47
PTPN3-201ENST00000262539 LELP1Q5T871 98 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 Q6Q795 121 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 C10orf25Q5T742 122 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 AGRNO00468 2067 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
PTPN3-201ENST00000262539 C1orf137Q5JT78 98 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 H3BT86 120 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 LINC01556Q5JQF7 62 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 WFDC13Q8IUB5 93 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 DHRS4-AS1Q9P1J3 65 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 M0QXV9 152 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 C2orf91Q6ZV80 131 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 CDC42SE2Q9NRR3 84 aa5.87□□□□□ -1.47
PTPN3-201ENST00000262539 DSPP15924 2871 aaKnown RBP5.87□□□□□ -1.47
PTPN3-201ENST00000262539 TAX1BP3O14907 124 aa5.86□□□□□ -1.47
PTPN3-201ENST00000262539 SPANXCQ9NY87 97 aa5.86□□□□□ -1.47
PTPN3-201ENST00000262539 NACAE9PAV3 2078 aa5.86□□□□□ -1.47
PTPN3-201ENST00000262539 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
PTPN3-201ENST00000262539 M0R378 163 aa5.85□□□□□ -1.47
PTPN3-201ENST00000262539 CD164L2Q6UWJ8 174 aa5.85□□□□□ -1.47
PTPN3-201ENST00000262539 USP34Q70CQ2 3546 aa5.85□□□□□ -1.47
PTPN3-201ENST00000262539 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
PTPN3-201ENST00000262539 FHL2Q14192 279 aa5.85□□□□□ -1.47
PTPN3-201ENST00000262539 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
PTPN3-201ENST00000262539 CCKP06307 115 aa5.84□□□□□ -1.47
PTPN3-201ENST00000262539 RBX1P62877 108 aa5.84□□□□□ -1.47
PTPN3-201ENST00000262539 XGP55808 180 aa5.84□□□□□ -1.47
PTPN3-201ENST00000262539 Q8IZM0 81 aa5.84□□□□□ -1.47
PTPN3-201ENST00000262539 CDKN2A-AS1Q9UH64 79 aa5.84□□□□□ -1.47
PTPN3-201ENST00000262539 LINC00242Q5T6M2 205 aa5.84□□□□□ -1.47
PTPN3-201ENST00000262539 COX17Q14061 63 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 FXYD2P54710 66 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 GAS8-AS1O95177 125 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 CSNK1G2-AS1Q8NCQ2 148 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 J3QL48 77 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 EDN2P20800 178 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 TTTY13Q9BZ97 58 aa5.83□□□□□ -1.48
PTPN3-201ENST00000262539 ESRGQ1W209 222 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 SERP2Q8N6R1 65 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 Q8N9L7 120 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 NHLRC4P0CG21 123 aaPredicted RBP5.82□□□□□ -1.48
PTPN3-201ENST00000262539 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 TRBV30A0A0K0K1B3 111 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 TRIOO75962 3097 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 C6orf99Q4VX62 202 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 REG3GQ6UW15 175 aa5.82□□□□□ -1.48
PTPN3-201ENST00000262539 B5MCH6 92 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 ZNF575Q86XF7 245 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 IGHV6-1A0A0B4J1U7 121 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 FAM229AH3BQW9 127 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 TEN1Q86WV5 123 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 MGAQ8IWI9 3026 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 PRM2P04554 102 aa5.81□□□□□ -1.48
PTPN3-201ENST00000262539 SDIM1Q6ZPB5 146 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 SBSPONQ8IVN8 264 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 C6orf223Q8N319 242 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 FAM30AQ9NZY2 134 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 LINC00959A0A1B0GUT2 108 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 G3V4G9 280 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 SMIM1B2RUZ4 78 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 MKI67P46013 3256 aaKnown RBP5.8□□□□□ -1.48
PTPN3-201ENST00000262539 Q6ZTC4 211 aa5.8□□□□□ -1.48
PTPN3-201ENST00000262539 EGFEM1PQ0D2K5 195 aa5.79□□□□□ -1.48
PTPN3-201ENST00000262539 LST1O00453 97 aa5.79□□□□□ -1.48
PTPN3-201ENST00000262539 SPINK1P00995 79 aa5.79□□□□□ -1.48
PTPN3-201ENST00000262539 STAB1Q9NY15 2570 aa5.79□□□□□ -1.48
PTPN3-201ENST00000262539 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
PTPN3-201ENST00000262539 GCN1Q92616 2671 aaKnown RBP5.78□□□□□ -1.48
PTPN3-201ENST00000262539 IGHV3OR16-9A0A0B4J2B5 98 aa5.78□□□□□ -1.48
PTPN3-201ENST00000262539 C2orf48Q96LS8 159 aa5.78□□□□□ -1.48
PTPN3-201ENST00000262539 GIG44P09565 113 aaPredicted RBP5.78□□□□□ -1.48
PTPN3-201ENST00000262539 MAPKAPK5-AS1Q8N8E1 139 aa5.77□□□□□ -1.49
PTPN3-201ENST00000262539 PRR4Q16378 134 aa5.77□□□□□ -1.49
PTPN3-201ENST00000262539 LIMD2Q9BT23 127 aa5.77□□□□□ -1.49
PTPN3-201ENST00000262539 J3KT08 172 aa5.77□□□□□ -1.49
PTPN3-201ENST00000262539 MRPL55Q7Z7F7 128 aaKnown RBP5.76□□□□□ -1.49
PTPN3-201ENST00000262539 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 WFDC2Q14508 124 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 Q6ZQY7 126 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 C5orf42Q9H799 3197 aa5.76□□□□□ -1.49
PTPN3-201ENST00000262539 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms