RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 UNQ6190/PRO20217Q6UXQ8 127 aa11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.99□□□□□ -0.49
CYSTM1-201ENST00000261811 LRP1BQ9NZR2 4599 aa11.98□□□□□ -0.49
CYSTM1-201ENST00000261811 ZNF22P17026 224 aaPredicted RBP11.98□□□□□ -0.49
CYSTM1-201ENST00000261811 RPL18AQ02543 176 aaKnown RBP11.98□□□□□ -0.49
CYSTM1-201ENST00000261811 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
CYSTM1-201ENST00000261811 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
CYSTM1-201ENST00000261811 MAP1LC3CQ9BXW4 147 aa11.98□□□□□ -0.49
CYSTM1-201ENST00000261811 A0A096LNI7 61 aa11.97□□□□□ -0.49
CYSTM1-201ENST00000261811 SMR3BP02814 79 aaPredicted RBP11.97□□□□□ -0.49
CYSTM1-201ENST00000261811 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
CYSTM1-201ENST00000261811 C2orf82Q6UX34 121 aa11.97□□□□□ -0.49
CYSTM1-201ENST00000261811 C11orf86A6NJI1 115 aa11.96□□□□□ -0.49
CYSTM1-201ENST00000261811 EPM2AB3EWF7 344 aa11.96□□□□□ -0.49
CYSTM1-201ENST00000261811 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
CYSTM1-201ENST00000261811 C6orf48Q9UBA6 75 aa11.96□□□□□ -0.49
CYSTM1-201ENST00000261811 TLX1NBP0CAT3 122 aa11.95□□□□□ -0.5
CYSTM1-201ENST00000261811 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
CYSTM1-201ENST00000261811 C10orf25Q5T742 122 aa11.95□□□□□ -0.5
CYSTM1-201ENST00000261811 PCLOQ9Y6V0 5065 aa11.94□□□□□ -0.5
CYSTM1-201ENST00000261811 A0A087WYN8 130 aa11.94□□□□□ -0.5
CYSTM1-201ENST00000261811 PLNP26678 52 aa11.94□□□□□ -0.5
CYSTM1-201ENST00000261811 COA6Q5JTJ3 125 aaKnown RBP11.94□□□□□ -0.5
CYSTM1-201ENST00000261811 PANO1I0J062 215 aa11.93□□□□□ -0.5
CYSTM1-201ENST00000261811 ODF1Q14990 250 aa11.93□□□□□ -0.5
CYSTM1-201ENST00000261811 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
CYSTM1-201ENST00000261811 STPG4Q8N801 248 aa11.93□□□□□ -0.5
CYSTM1-201ENST00000261811 PLA2G1BP04054 148 aaKnown RBP11.92□□□□□ -0.5
CYSTM1-201ENST00000261811 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
CYSTM1-201ENST00000261811 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
CYSTM1-201ENST00000261811 Q5VSD8 79 aa11.91□□□□□ -0.5
CYSTM1-201ENST00000261811 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
CYSTM1-201ENST00000261811 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
CYSTM1-201ENST00000261811 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
CYSTM1-201ENST00000261811 DPM2O94777 84 aa11.89□□□□□ -0.51
CYSTM1-201ENST00000261811 C7orf33Q8WU49 177 aa11.89□□□□□ -0.51
CYSTM1-201ENST00000261811 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
CYSTM1-201ENST00000261811 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
CYSTM1-201ENST00000261811 SYS1-DBNDD2H3BUS1 97 aa11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 IGKCP01834 107 aa11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 S100A6P06703 90 aa11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 HERVK_113P61574 105 aa11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 Q6ZRP5 223 aa11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 RYR1P21817 5038 aa11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 APOBP04114 4563 aaKnown RBP11.87□□□□□ -0.51
CYSTM1-201ENST00000261811 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
CYSTM1-201ENST00000261811 S100A2P29034 98 aa11.84□□□□□ -0.51
CYSTM1-201ENST00000261811 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
CYSTM1-201ENST00000261811 COX17Q14061 63 aa11.83□□□□□ -0.52
CYSTM1-201ENST00000261811 PMCHL2Q9BQD1 86 aa11.83□□□□□ -0.52
CYSTM1-201ENST00000261811 HSPG2P98160 4391 aa11.83□□□□□ -0.52
CYSTM1-201ENST00000261811 C20orf202A1L168 122 aa11.82□□□□□ -0.52
CYSTM1-201ENST00000261811 KRTDAPP60985 99 aa11.82□□□□□ -0.52
CYSTM1-201ENST00000261811 PLEKHB2Q96CS7 222 aa11.82□□□□□ -0.52
CYSTM1-201ENST00000261811 AKR1D1P51857 326 aa11.81□□□□□ -0.52
CYSTM1-201ENST00000261811 LINC00587B1AMM8 73 aa11.8□□□□□ -0.52
CYSTM1-201ENST00000261811 LEPROTO15243 131 aa11.8□□□□□ -0.52
CYSTM1-201ENST00000261811 C3orf79P0CE67 100 aa11.8□□□□□ -0.52
CYSTM1-201ENST00000261811 HERV-K104P63124 156 aa11.8□□□□□ -0.52
CYSTM1-201ENST00000261811 LINC01545Q5VT33 79 aa11.8□□□□□ -0.52
CYSTM1-201ENST00000261811 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
CYSTM1-201ENST00000261811 DNAH8Q96JB1 4490 aa11.79□□□□□ -0.52
CYSTM1-201ENST00000261811 MYMXA0A1B0GTQ4 84 aa11.79□□□□□ -0.52
CYSTM1-201ENST00000261811 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
CYSTM1-201ENST00000261811 PFN2P35080 140 aa11.79□□□□□ -0.52
CYSTM1-201ENST00000261811 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
CYSTM1-201ENST00000261811 KRTAP4-5Q9BYR2 181 aa11.78□□□□□ -0.52
CYSTM1-201ENST00000261811 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
CYSTM1-201ENST00000261811 LGALS3P17931 250 aaKnown RBP11.77□□□□□ -0.53
CYSTM1-201ENST00000261811 C9orf129Q5T035 196 aaKnown RBP11.77□□□□□ -0.53
CYSTM1-201ENST00000261811 FAM19A5Q7Z5A7 132 aaPredicted RBP11.77□□□□□ -0.53
CYSTM1-201ENST00000261811 XAGE1AQ9HD64 81 aa11.77□□□□□ -0.53
CYSTM1-201ENST00000261811 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.53
CYSTM1-201ENST00000261811 NMUP48645 174 aa11.76□□□□□ -0.53
CYSTM1-201ENST00000261811 HIST3H2BBQ8N257 126 aa11.76□□□□□ -0.53
CYSTM1-201ENST00000261811 J3QQQ9 107 aa11.75□□□□□ -0.53
CYSTM1-201ENST00000261811 LINC00158P58513 81 aa11.75□□□□□ -0.53
CYSTM1-201ENST00000261811 MEIG1Q5JSS6 88 aa11.75□□□□□ -0.53
CYSTM1-201ENST00000261811 SRRM2Q9UQ35 2752 aaKnown RBP11.75□□□□□ -0.53
CYSTM1-201ENST00000261811 FAM168BA1KXE4 195 aa11.74□□□□□ -0.53
CYSTM1-201ENST00000261811 E9PLD3 99 aa11.73□□□□□ -0.53
CYSTM1-201ENST00000261811 M0QXV9 152 aa11.73□□□□□ -0.53
CYSTM1-201ENST00000261811 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
CYSTM1-201ENST00000261811 PHF5AQ7RTV0 110 aaKnown RBP11.72□□□□□ -0.53
CYSTM1-201ENST00000261811 SNRPEP62304 92 aaKnown RBP11.71□□□□□ -0.53
CYSTM1-201ENST00000261811 HIST1H2BLQ99880 126 aa11.71□□□□□ -0.53
CYSTM1-201ENST00000261811 PLA2G2DQ9UNK4 145 aa11.71□□□□□ -0.53
CYSTM1-201ENST00000261811 ABCA13Q86UQ4 5058 aa11.71□□□□□ -0.54
CYSTM1-201ENST00000261811 UBE2BP63146 152 aa11.7□□□□□ -0.54
CYSTM1-201ENST00000261811 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
CYSTM1-201ENST00000261811 NKAPP1Q8N9T2 125 aa11.69□□□□□ -0.54
CYSTM1-201ENST00000261811 SND1-IT1Q9HBX3 110 aa11.69□□□□□ -0.54
CYSTM1-201ENST00000261811 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
CYSTM1-201ENST00000261811 PRR3P79522 188 aaKnown RBP11.68□□□□□ -0.54
CYSTM1-201ENST00000261811 C22orf24Q9Y442 160 aa11.68□□□□□ -0.54
CYSTM1-201ENST00000261811 A0A0U1RRA0 63 aa11.67□□□□□ -0.54
CYSTM1-201ENST00000261811 SMIM13P0DJ93 91 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms