RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LINC00575Q6W349 94 aa10.29□□□□□ -0.76
CUX2-201ENST00000261726 TRBV7-7A0A0K0K1E9 115 aa10.28□□□□□ -0.76
CUX2-201ENST00000261726 CRYGAP11844 174 aa10.28□□□□□ -0.76
CUX2-201ENST00000261726 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.76
CUX2-201ENST00000261726 Q6ZTC4 211 aa10.27□□□□□ -0.76
CUX2-201ENST00000261726 IGIPA6NJ69 53 aa10.27□□□□□ -0.76
CUX2-201ENST00000261726 A0A087WSZ3 146 aa10.27□□□□□ -0.77
CUX2-201ENST00000261726 MUC7Q8TAX7 377 aa10.27□□□□□ -0.77
CUX2-201ENST00000261726 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.77
CUX2-201ENST00000261726 CHD7Q9P2D1 2997 aa10.26□□□□□ -0.77
CUX2-201ENST00000261726 YPEL4Q96NS1 127 aa10.26□□□□□ -0.77
CUX2-201ENST00000261726 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
CUX2-201ENST00000261726 Q8N3U1 123 aa10.25□□□□□ -0.77
CUX2-201ENST00000261726 PRRC2AP48634 2157 aaKnown RBP10.25□□□□□ -0.77
CUX2-201ENST00000261726 CDH23Q9H251 3354 aa10.25□□□□□ -0.77
CUX2-201ENST00000261726 ODF3L2Q3SX64 289 aa10.25□□□□□ -0.77
CUX2-201ENST00000261726 CHCHD7Q9BUK0 85 aa10.25□□□□□ -0.77
CUX2-201ENST00000261726 HCG22E2RYF7 251 aa10.24□□□□□ -0.77
CUX2-201ENST00000261726 AVPP01185 164 aa10.24□□□□□ -0.77
CUX2-201ENST00000261726 OTOGLQ3ZCN5 2332 aa10.23□□□□□ -0.77
CUX2-201ENST00000261726 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
CUX2-201ENST00000261726 MUC6Q6W4X9 2439 aa10.23□□□□□ -0.77
CUX2-201ENST00000261726 LAMA2P24043 3122 aaKnown RBP10.23□□□□□ -0.77
CUX2-201ENST00000261726 C2orf48Q96LS8 159 aa10.23□□□□□ -0.77
CUX2-201ENST00000261726 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
CUX2-201ENST00000261726 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
CUX2-201ENST00000261726 A8MTW9 85 aa10.22□□□□□ -0.77
CUX2-201ENST00000261726 FHL2Q14192 279 aa10.21□□□□□ -0.77
CUX2-201ENST00000261726 ZNF580Q9UK33 172 aa10.21□□□□□ -0.77
CUX2-201ENST00000261726 ADAMTSL4-AS1Q5T5F5 129 aa10.21□□□□□ -0.77
CUX2-201ENST00000261726 HCFC1P51610 2035 aa10.21□□□□□ -0.77
CUX2-201ENST00000261726 IGKV2D-30A0A075B6S6 120 aa10.21□□□□□ -0.78
CUX2-201ENST00000261726 IGKV2-30P06310 120 aa10.21□□□□□ -0.78
CUX2-201ENST00000261726 Q9UF83 564 aa10.21□□□□□ -0.78
CUX2-201ENST00000261726 PRLHP81277 87 aa10.2□□□□□ -0.78
CUX2-201ENST00000261726 CDSNQ15517 529 aa10.2□□□□□ -0.78
CUX2-201ENST00000261726 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
CUX2-201ENST00000261726 COL5A1P20908 1838 aaPredicted RBP10.19□□□□□ -0.78
CUX2-201ENST00000261726 C7orf65Q6ZTY9 151 aa10.19□□□□□ -0.78
CUX2-201ENST00000261726 TTC28Q96AY4 2481 aa10.19□□□□□ -0.78
CUX2-201ENST00000261726 KRTAP10-9P60411 292 aa10.17□□□□□ -0.78
CUX2-201ENST00000261726 SONP18583 2426 aaKnown RBP10.17□□□□□ -0.78
CUX2-201ENST00000261726 CSPG4Q6UVK1 2322 aa10.17□□□□□ -0.78
CUX2-201ENST00000261726 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
CUX2-201ENST00000261726 DOPEY1Q5JWR5 2465 aa10.16□□□□□ -0.78
CUX2-201ENST00000261726 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
CUX2-201ENST00000261726 EXPH5Q8NEV8 1989 aa10.15□□□□□ -0.78
CUX2-201ENST00000261726 Q6ZSN1 163 aa10.15□□□□□ -0.78
CUX2-201ENST00000261726 LIMD2Q9BT23 127 aa10.15□□□□□ -0.78
CUX2-201ENST00000261726 SPG11Q96JI7 2443 aa10.15□□□□□ -0.78
CUX2-201ENST00000261726 ADAMTS20P59510 1910 aa10.14□□□□□ -0.79
CUX2-201ENST00000261726 LYPD5Q6UWN5 251 aa10.14□□□□□ -0.79
CUX2-201ENST00000261726 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
CUX2-201ENST00000261726 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
CUX2-201ENST00000261726 Q6ZRU5 148 aa10.13□□□□□ -0.79
CUX2-201ENST00000261726 C1orf64Q8NEQ6 169 aa10.13□□□□□ -0.79
CUX2-201ENST00000261726 URB1-AS1Q96HZ7 61 aa10.13□□□□□ -0.79
CUX2-201ENST00000261726 TMEM254Q8TBM7 123 aa10.13□□□□□ -0.79
CUX2-201ENST00000261726 SPACA4Q8TDM5 124 aa10.11□□□□□ -0.79
CUX2-201ENST00000261726 SMCR5Q8TEV8 140 aa10.11□□□□□ -0.79
CUX2-201ENST00000261726 RANBP2P49792 3224 aaKnown RBP10.11□□□□□ -0.79
CUX2-201ENST00000261726 RAI1Q7Z5J4 1906 aaPredicted RBP10.11□□□□□ -0.79
CUX2-201ENST00000261726 AMELXQ99217 191 aa10.1□□□□□ -0.79
CUX2-201ENST00000261726 NOTCH2Q04721 2471 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 HIVEP3Q5T1R4 2406 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 LINC00846Q9NV44 126 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 C22orf24Q9Y442 160 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 SMIM29Q86T20 159 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 CPAMD8Q8IZJ3 1885 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 A0A1B0GU69 56 aa10.09□□□□□ -0.79
CUX2-201ENST00000261726 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
CUX2-201ENST00000261726 MUC4Q99102 2169 aa10.08□□□□□ -0.8
CUX2-201ENST00000261726 LINC00310P59036 64 aa10.08□□□□□ -0.8
CUX2-201ENST00000261726 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
CUX2-201ENST00000261726 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
CUX2-201ENST00000261726 F8WDY8 70 aa10.06□□□□□ -0.8
CUX2-201ENST00000261726 ANKHD1Q8IWZ3 2542 aaKnown RBP10.06□□□□□ -0.8
CUX2-201ENST00000261726 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
CUX2-201ENST00000261726 J3QL48 77 aa10.05□□□□□ -0.8
CUX2-201ENST00000261726 WDR87Q6ZQQ6 2873 aa10.05□□□□□ -0.8
CUX2-201ENST00000261726 MOBPQ13875 183 aa10.05□□□□□ -0.8
CUX2-201ENST00000261726 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
CUX2-201ENST00000261726 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
CUX2-201ENST00000261726 SPAG11AQ6PDA7 123 aa10.04□□□□□ -0.8
CUX2-201ENST00000261726 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
CUX2-201ENST00000261726 Q8N2B8 174 aa10.03□□□□□ -0.8
CUX2-201ENST00000261726 XIRP2A4UGR9 3374 aa10.03□□□□□ -0.8
CUX2-201ENST00000261726 ACACBO00763 2458 aa10.02□□□□□ -0.81
CUX2-201ENST00000261726 AGRNO00468 2067 aa10.02□□□□□ -0.81
CUX2-201ENST00000261726 CUL9Q8IWT3 2517 aa10.01□□□□□ -0.81
CUX2-201ENST00000261726 SZT2Q5T011 3432 aa10.01□□□□□ -0.81
CUX2-201ENST00000261726 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
CUX2-201ENST00000261726 CXCL6P80162 114 aa10□□□□□ -0.81
CUX2-201ENST00000261726 MDFIQ99750 246 aa10□□□□□ -0.81
CUX2-201ENST00000261726 ACYP2P14621 99 aa9.99□□□□□ -0.81
CUX2-201ENST00000261726 FHL3Q13643 280 aa9.99□□□□□ -0.81
CUX2-201ENST00000261726 PRUNE2Q8WUY3 3088 aa9.98□□□□□ -0.81
CUX2-201ENST00000261726 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
CUX2-201ENST00000261726 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
CUX2-201ENST00000261726 A0A096LNJ9 63 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms