RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 MEGF8Q7Z7M0 2845 aa15.15■□□□□ 0.02
SIX3-201ENST00000260653 MUSTN1Q8IVN3 82 aa15.14■□□□□ 0.01
SIX3-201ENST00000260653 IGLL5B9A064 214 aa15.14■□□□□ 0.01
SIX3-201ENST00000260653 DAND5Q8N907 189 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 UBE2WQ96B02 151 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 A0A1B0GWB2 263 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 COX7A2LO14548 114 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 TIMM17BO60830 172 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 FOXI1Q12951 378 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 SPANXDQ9BXN6 97 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 SPANXCQ9NY87 97 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 A0A0U1RRA0 63 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 C9orf118A6NHY6 69 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 CRPP02741 224 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 PRSS2P07478 247 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 MIAQ16674 131 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 H3BUT2 72 aa15.11■□□□□ 0.01
SIX3-201ENST00000260653 NPC2P61916 151 aa15.11■□□□□ 0.01
SIX3-201ENST00000260653 MEIG1Q5JSS6 88 aa15.1■□□□□ 0.01
SIX3-201ENST00000260653 LINC01561Q8N1V8 128 aa15.1■□□□□ 0.01
SIX3-201ENST00000260653 APOMO95445 188 aa15.09■□□□□ 0.01
SIX3-201ENST00000260653 LINC01556Q5JQF7 62 aa15.09■□□□□ 0.01
SIX3-201ENST00000260653 LINC00588Q9Y4M8 146 aa15.09■□□□□ 0.01
SIX3-201ENST00000260653 CIRBPQ14011 172 aaKnown RBP15.09■□□□□ 0.01
SIX3-201ENST00000260653 MALP21145 153 aa15.08■□□□□ 0.01
SIX3-201ENST00000260653 EIF4EBP3O60516 100 aaPredicted RBP15.08■□□□□ 0
SIX3-201ENST00000260653 C6orf226Q5I0X4 101 aa15.08■□□□□ 0
SIX3-201ENST00000260653 CFC1BP0CG36 223 aa15.07■□□□□ 0
SIX3-201ENST00000260653 CFC1P0CG37 223 aa15.07■□□□□ 0
SIX3-201ENST00000260653 Q8IZM0 81 aa15.07■□□□□ 0
SIX3-201ENST00000260653 SPCS1Q9Y6A9 102 aa15.07■□□□□ 0
SIX3-201ENST00000260653 NHLRC4P0CG21 123 aaPredicted RBP15.06■□□□□ 0
SIX3-201ENST00000260653 TRAV8-4A0A0B4J246 113 aa15.05■□□□□ -0
SIX3-201ENST00000260653 C2orf82Q6UX34 121 aa15.05■□□□□ -0
SIX3-201ENST00000260653 CCL18P55774 89 aa15.04■□□□□ -0
SIX3-201ENST00000260653 CCDC179H3BU77 68 aa15.04■□□□□ -0
SIX3-201ENST00000260653 MT-ATP8P03928 68 aa15.04■□□□□ -0
SIX3-201ENST00000260653 DNAH10OSP0CZ25 163 aa15.04■□□□□ -0
SIX3-201ENST00000260653 KIAA0087Q14695 138 aa15.04■□□□□ -0
SIX3-201ENST00000260653 KRTAP21-3Q3LHN1 58 aa15.04■□□□□ -0
SIX3-201ENST00000260653 A0A1W2PPM0 123 aa15.02□□□□□ -0.01
SIX3-201ENST00000260653 LINC00308Q8TCZ7 52 aa15.02□□□□□ -0.01
SIX3-201ENST00000260653 IFITM1P13164 125 aa15.01□□□□□ -0.01
SIX3-201ENST00000260653 CSMD3Q7Z407 3707 aa15.01□□□□□ -0.01
SIX3-201ENST00000260653 KRTAP26-1Q6PEX3 210 aa15□□□□□ -0.01
SIX3-201ENST00000260653 SFTA2Q6UW10 78 aa15□□□□□ -0.01
SIX3-201ENST00000260653 SOSTDC1Q6X4U4 206 aa15□□□□□ -0.01
SIX3-201ENST00000260653 LYSTQ99698 3801 aa15□□□□□ -0.01
SIX3-201ENST00000260653 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.99□□□□□ -0.01
SIX3-201ENST00000260653 PFN2P35080 140 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 MIR7-3HGQ8N6C7 128 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 CDIP1Q9H305 208 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 KLK5Q9Y337 293 aaPredicted RBP14.98□□□□□ -0.01
SIX3-201ENST00000260653 A0A0B4J2C4 111 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 IBA57-AS1B1ANH7 110 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 LINC00158P58513 81 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 PRO1854Q9UHT4 67 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 SPAG11BQ08648 103 aa14.97□□□□□ -0.01
SIX3-201ENST00000260653 LINC00526Q96FQ7 95 aa14.97□□□□□ -0.01
SIX3-201ENST00000260653 DYNC2H1Q8NCM8 4307 aaKnown RBP14.97□□□□□ -0.01
SIX3-201ENST00000260653 SEC61GP60059 68 aa14.97□□□□□ -0.01
SIX3-201ENST00000260653 FABP2P12104 132 aa14.96□□□□□ -0.01
SIX3-201ENST00000260653 C6orf223Q8N319 242 aa14.96□□□□□ -0.02
SIX3-201ENST00000260653 C1orf43Q9BWL3 253 aa14.96□□□□□ -0.02
SIX3-201ENST00000260653 CXCL5P42830 114 aa14.95□□□□□ -0.02
SIX3-201ENST00000260653 UPK3BQ9BT76 320 aa14.95□□□□□ -0.02
SIX3-201ENST00000260653 Q9HAA7 133 aa14.95□□□□□ -0.02
SIX3-201ENST00000260653 IGKV2D-24A0A075B6R9 120 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 XGP55808 180 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 TENM2Q9NT68 2774 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 TMEM126AQ9H061 195 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 APLNQ9ULZ1 77 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 COPS9Q8WXC6 57 aa14.92□□□□□ -0.02
SIX3-201ENST00000260653 F8W1H4 67 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 H7C2G1 150 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 WFDC2Q14508 124 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 C10orf25Q5T742 122 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 DNAH7Q8WXX0 4024 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 C9orf116Q5BN46 136 aaPredicted RBP14.91□□□□□ -0.02
SIX3-201ENST00000260653 UNQ6190/PRO20217Q6UXQ8 127 aa14.9□□□□□ -0.02
SIX3-201ENST00000260653 ETDBQ3ZM63 59 aa14.9□□□□□ -0.02
SIX3-201ENST00000260653 DNAH1Q9P2D7 4330 aa14.89□□□□□ -0.03
SIX3-201ENST00000260653 HIGD2BQ4VC39 106 aa14.89□□□□□ -0.03
SIX3-201ENST00000260653 C15orf56Q8N910 161 aa14.88□□□□□ -0.03
SIX3-201ENST00000260653 FAM19A5Q7Z5A7 132 aaPredicted RBP14.88□□□□□ -0.03
SIX3-201ENST00000260653 PLECQ15149 4684 aaKnown RBP14.87□□□□□ -0.03
SIX3-201ENST00000260653 FBN3Q75N90 2809 aa14.87□□□□□ -0.03
SIX3-201ENST00000260653 LOC107984156A0A0G2JMH3 177 aa14.87□□□□□ -0.03
SIX3-201ENST00000260653 ARL17AQ8IVW1 177 aa14.87□□□□□ -0.03
SIX3-201ENST00000260653 NDUFV3P56181 108 aaKnown RBP14.87□□□□□ -0.03
SIX3-201ENST00000260653 NUPR2A6NF83 97 aa14.86□□□□□ -0.03
SIX3-201ENST00000260653 NTN5Q8WTR8 489 aaPredicted RBP14.86□□□□□ -0.03
SIX3-201ENST00000260653 Q1RN00 199 aa14.86□□□□□ -0.03
SIX3-201ENST00000260653 LOC107984640A0A0U1RRK4 108 aa14.85□□□□□ -0.03
SIX3-201ENST00000260653 UBE2DNLQ8IWF7 75 aa14.85□□□□□ -0.03
SIX3-201ENST00000260653 SND1-IT1Q9HBX3 110 aa14.85□□□□□ -0.03
SIX3-201ENST00000260653 ZNF561-AS1K7EIQ3 104 aa14.84□□□□□ -0.03
SIX3-201ENST00000260653 RPL13AP40429 203 aaKnown RBP14.84□□□□□ -0.03
SIX3-201ENST00000260653 COX17Q14061 63 aa14.84□□□□□ -0.03
SIX3-201ENST00000260653 STARD9Q9P2P6 4700 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms