RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 NDUFA12Q9UI09 145 aa17.07■□□□□ 0.32
TOMM40-201ENST00000252487 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.07■□□□□ 0.32
TOMM40-201ENST00000252487 ZNF625Q96I27 306 aaPredicted RBP17.07■□□□□ 0.32
TOMM40-201ENST00000252487 SLPIP03973 132 aa17.06■□□□□ 0.32
TOMM40-201ENST00000252487 UNQ6190/PRO20217Q6UXQ8 127 aa17.06■□□□□ 0.32
TOMM40-201ENST00000252487 ZNF815PA8K554 130 aa17.05■□□□□ 0.32
TOMM40-201ENST00000252487 CKS1BP61024 79 aa17.05■□□□□ 0.32
TOMM40-201ENST00000252487 PRO1933Q9H354 126 aa17.04■□□□□ 0.32
TOMM40-201ENST00000252487 FAT2Q9NYQ8 4349 aa17.04■□□□□ 0.32
TOMM40-201ENST00000252487 FUSP35637 526 aaKnown RBP eCLIP17.04■□□□□ 0.32
TOMM40-201ENST00000252487 CAMK2N2Q96S95 79 aa17.04■□□□□ 0.32
TOMM40-201ENST00000252487 NDUFA1O15239 70 aa17.03■□□□□ 0.32
TOMM40-201ENST00000252487 Q6ZRU5 148 aa17.03■□□□□ 0.32
TOMM40-201ENST00000252487 COX8AP10176 69 aa17.02■□□□□ 0.32
TOMM40-201ENST00000252487 Q8N814 137 aa17.01■□□□□ 0.31
TOMM40-201ENST00000252487 RYR3Q15413 4870 aa17.01■□□□□ 0.31
TOMM40-201ENST00000252487 MYMXA0A1B0GTQ4 84 aa17.01■□□□□ 0.31
TOMM40-201ENST00000252487 C9orf116Q5BN46 136 aaPredicted RBP17.01■□□□□ 0.31
TOMM40-201ENST00000252487 C2orf48Q96LS8 159 aa17■□□□□ 0.31
TOMM40-201ENST00000252487 C14orf177Q52M58 125 aa16.99■□□□□ 0.31
TOMM40-201ENST00000252487 CXCL5P42830 114 aa16.99■□□□□ 0.31
TOMM40-201ENST00000252487 SYCNQ0VAF6 134 aa16.99■□□□□ 0.31
TOMM40-201ENST00000252487 C6orf48Q9UBA6 75 aa16.99■□□□□ 0.31
TOMM40-201ENST00000252487 BOD1L2Q8IYS8 172 aa16.98■□□□□ 0.31
TOMM40-201ENST00000252487 HECTD4Q9Y4D8 3996 aa16.98■□□□□ 0.31
TOMM40-201ENST00000252487 CARD19Q96LW7 228 aa16.96■□□□□ 0.31
TOMM40-201ENST00000252487 A0A0J9YXY3 114 aa16.96■□□□□ 0.3
TOMM40-201ENST00000252487 A0A0U1RRA0 63 aa16.96■□□□□ 0.3
TOMM40-201ENST00000252487 DNAH11Q96DT5 4516 aa16.95■□□□□ 0.3
TOMM40-201ENST00000252487 SLC25A34Q6PIV7 304 aa16.95■□□□□ 0.3
TOMM40-201ENST00000252487 SCGB1D4Q6XE38 83 aa16.93■□□□□ 0.3
TOMM40-201ENST00000252487 PFN2P35080 140 aa16.92■□□□□ 0.3
TOMM40-201ENST00000252487 CNBPP62633 177 aaKnown RBP16.92■□□□□ 0.3
TOMM40-201ENST00000252487 LINC01620Q4KN68 170 aa16.92■□□□□ 0.3
TOMM40-201ENST00000252487 MEIG1Q5JSS6 88 aa16.92■□□□□ 0.3
TOMM40-201ENST00000252487 SMIM13P0DJ93 91 aa16.91■□□□□ 0.3
TOMM40-201ENST00000252487 HERV-K104P63124 156 aa16.91■□□□□ 0.3
TOMM40-201ENST00000252487 ERG28Q9UKR5 140 aa16.9■□□□□ 0.3
TOMM40-201ENST00000252487 EREGO14944 169 aa16.9■□□□□ 0.3
TOMM40-201ENST00000252487 DLEU1O43261 78 aa16.9■□□□□ 0.3
TOMM40-201ENST00000252487 PKD1P98161 4303 aa16.89■□□□□ 0.29
TOMM40-201ENST00000252487 TRBV30A0A0K0K1B3 111 aa16.89■□□□□ 0.29
TOMM40-201ENST00000252487 F8WDY8 70 aa16.89■□□□□ 0.29
TOMM40-201ENST00000252487 KRTAP10-2P60368 255 aa16.89■□□□□ 0.29
TOMM40-201ENST00000252487 SFTA2Q6UW10 78 aa16.89■□□□□ 0.29
TOMM40-201ENST00000252487 DAND5Q8N907 189 aa16.89■□□□□ 0.29
TOMM40-201ENST00000252487 UQCR10Q9UDW1 63 aa16.88■□□□□ 0.29
TOMM40-201ENST00000252487 C2orf91Q6ZV80 131 aa16.87■□□□□ 0.29
TOMM40-201ENST00000252487 ADAMTSL4-AS1Q5T5F5 129 aa16.87■□□□□ 0.29
TOMM40-201ENST00000252487 LITAFQ99732 161 aa16.87■□□□□ 0.29
TOMM40-201ENST00000252487 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.86■□□□□ 0.29
TOMM40-201ENST00000252487 LINC00158P58513 81 aa16.86■□□□□ 0.29
TOMM40-201ENST00000252487 LINC00336Q6ZUF6 198 aa16.85■□□□□ 0.29
TOMM40-201ENST00000252487 MIEN1Q9BRT3 115 aa16.84■□□□□ 0.29
TOMM40-201ENST00000252487 TSTD3H0UI37 97 aa16.83■□□□□ 0.28
TOMM40-201ENST00000252487 IGLV5-52A0A0A0MRZ9 124 aa16.82■□□□□ 0.28
TOMM40-201ENST00000252487 NPC2P61916 151 aa16.82■□□□□ 0.28
TOMM40-201ENST00000252487 RNF151Q2KHN1 245 aa16.82■□□□□ 0.28
TOMM40-201ENST00000252487 RPL18AQ02543 176 aaKnown RBP16.81■□□□□ 0.28
TOMM40-201ENST00000252487 MIR7-3HGQ8N6C7 128 aa16.81■□□□□ 0.28
TOMM40-201ENST00000252487 C9orf163Q8N9P6 203 aa16.81■□□□□ 0.28
TOMM40-201ENST00000252487 DNAH5Q8TE73 4624 aa16.8■□□□□ 0.28
TOMM40-201ENST00000252487 Q6ZRP5 223 aa16.8■□□□□ 0.28
TOMM40-201ENST00000252487 GAGE2EQ4V326 116 aa16.79■□□□□ 0.28
TOMM40-201ENST00000252487 GAGE2DQ9UEU5 116 aa16.79■□□□□ 0.28
TOMM40-201ENST00000252487 TIMM17BO60830 172 aa16.79■□□□□ 0.28
TOMM40-201ENST00000252487 CIRBPQ14011 172 aaKnown RBP16.79■□□□□ 0.28
TOMM40-201ENST00000252487 TMEM238C9JI98 176 aa16.78■□□□□ 0.28
TOMM40-201ENST00000252487 NDUFC2-KCTD14E9PQ53 114 aa16.78■□□□□ 0.28
TOMM40-201ENST00000252487 EIF4EBP3O60516 100 aaPredicted RBP16.78■□□□□ 0.28
TOMM40-201ENST00000252487 HNRNPA3P51991 378 aaKnown RBP16.78■□□□□ 0.28
TOMM40-201ENST00000252487 COX17Q14061 63 aa16.77■□□□□ 0.28
TOMM40-201ENST00000252487 XAGE1AQ9HD64 81 aa16.77■□□□□ 0.28
TOMM40-201ENST00000252487 HIGD1BQ9P298 99 aa16.77■□□□□ 0.28
TOMM40-201ENST00000252487 GAGE2BQ13066 116 aa16.76■□□□□ 0.27
TOMM40-201ENST00000252487 LOC107984640A0A0U1RRK4 108 aa16.76■□□□□ 0.27
TOMM40-201ENST00000252487 A0A1B0GVY2 172 aa16.75■□□□□ 0.27
TOMM40-201ENST00000252487 LINC00587B1AMM8 73 aa16.75■□□□□ 0.27
TOMM40-201ENST00000252487 SND1-IT1Q9HBX3 110 aa16.75■□□□□ 0.27
TOMM40-201ENST00000252487 TLX1NBP0CAT3 122 aa16.74■□□□□ 0.27
TOMM40-201ENST00000252487 PKHD1P08F94 4074 aa16.74■□□□□ 0.27
TOMM40-201ENST00000252487 A0A096LNI7 61 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 SRSF9Q13242 221 aaKnown RBP eCLIP16.73■□□□□ 0.27
TOMM40-201ENST00000252487 SOSTDC1Q6X4U4 206 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 SDIM1Q6ZPB5 146 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 IGKV2-24A0A0C4DH68 120 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 CHTF8P0CG12 524 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 HIST1H4GQ99525 98 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 SPANXDQ9BXN6 97 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 SPANXB1Q9NS25 103 aaPredicted RBP16.73■□□□□ 0.27
TOMM40-201ENST00000252487 SPANXCQ9NY87 97 aa16.73■□□□□ 0.27
TOMM40-201ENST00000252487 PGPEP1Q9NXJ5 209 aa16.7■□□□□ 0.26
TOMM40-201ENST00000252487 PCP4L1A6NKN8 68 aa16.7■□□□□ 0.26
TOMM40-201ENST00000252487 DDTP30046 118 aa16.7■□□□□ 0.26
TOMM40-201ENST00000252487 C9orf129Q5T035 196 aaKnown RBP16.7■□□□□ 0.26
TOMM40-201ENST00000252487 LINC00308Q8TCZ7 52 aa16.7■□□□□ 0.26
TOMM40-201ENST00000252487 PTTG1IPP53801 180 aa16.69■□□□□ 0.26
TOMM40-201ENST00000252487 CTAG1AP78358 180 aa16.69■□□□□ 0.26
TOMM40-201ENST00000252487 MUSTN1Q8IVN3 82 aa16.69■□□□□ 0.26
TOMM40-201ENST00000252487 PANO1I0J062 215 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms