RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PRLHP81277 87 aa9.42□□□□□ -0.9
COL1A1-201ENST00000225964 Q6ZSN1 163 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 ATRXP46100 2492 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 A0A087WSZ3 146 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 H0Y9P7 68 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 LINC00575Q6W349 94 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 PTPRSQ13332 1948 aa9.41□□□□□ -0.9
COL1A1-201ENST00000225964 FHL3Q13643 280 aa9.4□□□□□ -0.9
COL1A1-201ENST00000225964 TRAV7A0A075B6U4 112 aa9.4□□□□□ -0.91
COL1A1-201ENST00000225964 CNFNQ9BYD5 112 aa9.4□□□□□ -0.91
COL1A1-201ENST00000225964 Q6ZRU5 148 aa9.39□□□□□ -0.91
COL1A1-201ENST00000225964 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
COL1A1-201ENST00000225964 MDFIQ99750 246 aa9.39□□□□□ -0.91
COL1A1-201ENST00000225964 ARHGAP32A7KAX9 2087 aa9.39□□□□□ -0.91
COL1A1-201ENST00000225964 HCG22E2RYF7 251 aa9.38□□□□□ -0.91
COL1A1-201ENST00000225964 XGP55808 180 aa9.38□□□□□ -0.91
COL1A1-201ENST00000225964 TSPEAR-AS2P59090 65 aa9.38□□□□□ -0.91
COL1A1-201ENST00000225964 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
COL1A1-201ENST00000225964 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
COL1A1-201ENST00000225964 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
COL1A1-201ENST00000225964 A8MTW9 85 aa9.36□□□□□ -0.91
COL1A1-201ENST00000225964 C7orf65Q6ZTY9 151 aa9.36□□□□□ -0.91
COL1A1-201ENST00000225964 SMCR5Q8TEV8 140 aa9.36□□□□□ -0.91
COL1A1-201ENST00000225964 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
COL1A1-201ENST00000225964 A0A087WVE0 104 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 A0A1W2PPR1 153 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 CUL9Q8IWT3 2517 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 SPACA4Q8TDM5 124 aa9.35□□□□□ -0.91
COL1A1-201ENST00000225964 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
COL1A1-201ENST00000225964 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
COL1A1-201ENST00000225964 TRBV7-7A0A0K0K1E9 115 aa9.34□□□□□ -0.91
COL1A1-201ENST00000225964 AMELXQ99217 191 aa9.33□□□□□ -0.92
COL1A1-201ENST00000225964 CRYGAP11844 174 aa9.33□□□□□ -0.92
COL1A1-201ENST00000225964 TET2Q6N021 2002 aaPredicted RBP9.33□□□□□ -0.92
COL1A1-201ENST00000225964 PRRC2AP48634 2157 aaKnown RBP9.33□□□□□ -0.92
COL1A1-201ENST00000225964 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
COL1A1-201ENST00000225964 Q8N3U1 123 aa9.31□□□□□ -0.92
COL1A1-201ENST00000225964 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
COL1A1-201ENST00000225964 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
COL1A1-201ENST00000225964 PLXNB1O43157 2135 aa9.3□□□□□ -0.92
COL1A1-201ENST00000225964 SORL1Q92673 2214 aa9.3□□□□□ -0.92
COL1A1-201ENST00000225964 AGRNO00468 2067 aa9.3□□□□□ -0.92
COL1A1-201ENST00000225964 MOBPQ13875 183 aa9.3□□□□□ -0.92
COL1A1-201ENST00000225964 PSPHP1O15172 72 aa9.29□□□□□ -0.92
COL1A1-201ENST00000225964 Q8N2B8 174 aa9.29□□□□□ -0.92
COL1A1-201ENST00000225964 LINC01561Q8N1V8 128 aa9.29□□□□□ -0.92
COL1A1-201ENST00000225964 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
COL1A1-201ENST00000225964 SONP18583 2426 aaKnown RBP9.28□□□□□ -0.92
COL1A1-201ENST00000225964 URB1-AS1Q96HZ7 61 aa9.28□□□□□ -0.92
COL1A1-201ENST00000225964 TTC28Q96AY4 2481 aa9.26□□□□□ -0.93
COL1A1-201ENST00000225964 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
COL1A1-201ENST00000225964 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
COL1A1-201ENST00000225964 Q9UF83 564 aa9.24□□□□□ -0.93
COL1A1-201ENST00000225964 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
COL1A1-201ENST00000225964 MUC4Q99102 2169 aa9.24□□□□□ -0.93
COL1A1-201ENST00000225964 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
COL1A1-201ENST00000225964 C16orf90A8MZG2 172 aa9.23□□□□□ -0.93
COL1A1-201ENST00000225964 RTL8CO15255 209 aa9.23□□□□□ -0.93
COL1A1-201ENST00000225964 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
COL1A1-201ENST00000225964 PHF5AQ7RTV0 110 aaKnown RBP9.22□□□□□ -0.93
COL1A1-201ENST00000225964 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.94
COL1A1-201ENST00000225964 LINC00167Q96N53 147 aa9.21□□□□□ -0.94
COL1A1-201ENST00000225964 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
COL1A1-201ENST00000225964 LINC00310P59036 64 aa9.19□□□□□ -0.94
COL1A1-201ENST00000225964 LINC00315P59091 139 aa9.19□□□□□ -0.94
COL1A1-201ENST00000225964 J3QL48 77 aa9.18□□□□□ -0.94
COL1A1-201ENST00000225964 COX8CQ7Z4L0 72 aa9.18□□□□□ -0.94
COL1A1-201ENST00000225964 C11orf72Q8NBR9 251 aa9.18□□□□□ -0.94
COL1A1-201ENST00000225964 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
COL1A1-201ENST00000225964 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
COL1A1-201ENST00000225964 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
COL1A1-201ENST00000225964 A0A1B0GU69 56 aa9.17□□□□□ -0.94
COL1A1-201ENST00000225964 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
COL1A1-201ENST00000225964 ACACBO00763 2458 aa9.17□□□□□ -0.94
COL1A1-201ENST00000225964 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
COL1A1-201ENST00000225964 LINC00313P59037 77 aa9.15□□□□□ -0.94
COL1A1-201ENST00000225964 CXCL6P80162 114 aa9.15□□□□□ -0.94
COL1A1-201ENST00000225964 CSPG4Q6UVK1 2322 aa9.15□□□□□ -0.94
COL1A1-201ENST00000225964 KIF25-AS1Q9Y6Z4 181 aa9.15□□□□□ -0.94
COL1A1-201ENST00000225964 ANKHD1Q8IWZ3 2542 aaKnown RBP9.14□□□□□ -0.95
COL1A1-201ENST00000225964 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
COL1A1-201ENST00000225964 ACYP2P14621 99 aa9.14□□□□□ -0.95
COL1A1-201ENST00000225964 SPATA3Q8NHX4 192 aa9.14□□□□□ -0.95
COL1A1-201ENST00000225964 Q6ZRP5 223 aa9.14□□□□□ -0.95
COL1A1-201ENST00000225964 SPG11Q96JI7 2443 aa9.13□□□□□ -0.95
COL1A1-201ENST00000225964 A0A096LNJ9 63 aa9.13□□□□□ -0.95
COL1A1-201ENST00000225964 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
COL1A1-201ENST00000225964 C10orf142B7Z368 130 aa9.12□□□□□ -0.95
COL1A1-201ENST00000225964 Q8NBF4 154 aa9.12□□□□□ -0.95
COL1A1-201ENST00000225964 Q96NJ1 140 aa9.12□□□□□ -0.95
COL1A1-201ENST00000225964 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
COL1A1-201ENST00000225964 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
COL1A1-201ENST00000225964 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
COL1A1-201ENST00000225964 CCDC168Q8NDH2 2452 aa9.1□□□□□ -0.95
COL1A1-201ENST00000225964 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
COL1A1-201ENST00000225964 COL4A2P08572 1712 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms