RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.72
SNRPD3-201ENST00000215829 PSCAO43653 123 aa10.52□□□□□ -0.72
SNRPD3-201ENST00000215829 LINC00526Q96FQ7 95 aa10.52□□□□□ -0.72
SNRPD3-201ENST00000215829 KMT2AQ03164 3969 aa10.52□□□□□ -0.72
SNRPD3-201ENST00000215829 USP17L23D6RBM5 183 aa10.52□□□□□ -0.73
SNRPD3-201ENST00000215829 LINC00587B1AMM8 73 aa10.51□□□□□ -0.73
SNRPD3-201ENST00000215829 TIMM17BO60830 172 aa10.51□□□□□ -0.73
SNRPD3-201ENST00000215829 Q6ZRN7 208 aaPredicted RBP10.51□□□□□ -0.73
SNRPD3-201ENST00000215829 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
SNRPD3-201ENST00000215829 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
SNRPD3-201ENST00000215829 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
SNRPD3-201ENST00000215829 LITAFQ99732 161 aa10.5□□□□□ -0.73
SNRPD3-201ENST00000215829 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
SNRPD3-201ENST00000215829 TMEM238C9JI98 176 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 MEIG1Q5JSS6 88 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 UNQ6190/PRO20217Q6UXQ8 127 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 DNAH10Q8IVF4 4471 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 F8WDY8 70 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 HSD52Q0P140 79 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 TAL2Q16559 108 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 HIST1H4GQ99525 98 aa10.49□□□□□ -0.73
SNRPD3-201ENST00000215829 LECT2O14960 151 aa10.48□□□□□ -0.73
SNRPD3-201ENST00000215829 C10orf25Q5T742 122 aa10.48□□□□□ -0.73
SNRPD3-201ENST00000215829 CAMK2N2Q96S95 79 aa10.48□□□□□ -0.73
SNRPD3-201ENST00000215829 SMIM13P0DJ93 91 aa10.47□□□□□ -0.73
SNRPD3-201ENST00000215829 ERG28Q9UKR5 140 aa10.47□□□□□ -0.73
SNRPD3-201ENST00000215829 DNAH6Q9C0G6 4158 aa10.47□□□□□ -0.73
SNRPD3-201ENST00000215829 SPANXDQ9BXN6 97 aa10.47□□□□□ -0.73
SNRPD3-201ENST00000215829 SPANXCQ9NY87 97 aa10.47□□□□□ -0.73
SNRPD3-201ENST00000215829 A0A0U1RRA0 63 aa10.46□□□□□ -0.74
SNRPD3-201ENST00000215829 WFDC2Q14508 124 aa10.46□□□□□ -0.74
SNRPD3-201ENST00000215829 Q6ZVH6 145 aa10.46□□□□□ -0.74
SNRPD3-201ENST00000215829 PFN2P35080 140 aa10.45□□□□□ -0.74
SNRPD3-201ENST00000215829 HINT1P49773 126 aaPredicted RBP10.45□□□□□ -0.74
SNRPD3-201ENST00000215829 C1orf134Q5TEV5 83 aa10.45□□□□□ -0.74
SNRPD3-201ENST00000215829 CEND1Q8N111 149 aa10.45□□□□□ -0.74
SNRPD3-201ENST00000215829 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 LRCOL1A6NCL2 159 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 LINC00158P58513 81 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 COX17Q14061 63 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 Q6ZRU5 148 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 C6orf48Q9UBA6 75 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 M0R143 59 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 GCSHP23434 173 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 SYCNQ0VAF6 134 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 DAND5Q8N907 189 aa10.44□□□□□ -0.74
SNRPD3-201ENST00000215829 SLPIP03973 132 aa10.43□□□□□ -0.74
SNRPD3-201ENST00000215829 C14orf177Q52M58 125 aa10.43□□□□□ -0.74
SNRPD3-201ENST00000215829 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
SNRPD3-201ENST00000215829 IFITM1P13164 125 aa10.42□□□□□ -0.74
SNRPD3-201ENST00000215829 MIR7-3HGQ8N6C7 128 aa10.42□□□□□ -0.74
SNRPD3-201ENST00000215829 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
SNRPD3-201ENST00000215829 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
SNRPD3-201ENST00000215829 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
SNRPD3-201ENST00000215829 DNAH2Q9P225 4427 aa10.4□□□□□ -0.74
SNRPD3-201ENST00000215829 FXYD2P54710 66 aa10.4□□□□□ -0.74
SNRPD3-201ENST00000215829 BATFQ16520 125 aa10.4□□□□□ -0.74
SNRPD3-201ENST00000215829 LINC00308Q8TCZ7 52 aa10.4□□□□□ -0.74
SNRPD3-201ENST00000215829 LCE6AA0A183 80 aa10.39□□□□□ -0.75
SNRPD3-201ENST00000215829 NPC2P61916 151 aa10.39□□□□□ -0.75
SNRPD3-201ENST00000215829 RNF151Q2KHN1 245 aa10.39□□□□□ -0.75
SNRPD3-201ENST00000215829 HYDINQ4G0P3 5121 aa10.39□□□□□ -0.75
SNRPD3-201ENST00000215829 COPS9Q8WXC6 57 aa10.39□□□□□ -0.75
SNRPD3-201ENST00000215829 EREGO14944 169 aa10.38□□□□□ -0.75
SNRPD3-201ENST00000215829 EIF4EBP3O60516 100 aaPredicted RBP10.38□□□□□ -0.75
SNRPD3-201ENST00000215829 CNBPP62633 177 aaKnown RBP10.38□□□□□ -0.75
SNRPD3-201ENST00000215829 RPL24P83731 157 aaKnown RBP10.38□□□□□ -0.75
SNRPD3-201ENST00000215829 A0A087WTM6 91 aa10.37□□□□□ -0.75
SNRPD3-201ENST00000215829 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
SNRPD3-201ENST00000215829 PPDPFQ9H3Y8 114 aa10.37□□□□□ -0.75
SNRPD3-201ENST00000215829 Q8N814 137 aa10.37□□□□□ -0.75
SNRPD3-201ENST00000215829 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
SNRPD3-201ENST00000215829 A6NJY4 79 aa10.36□□□□□ -0.75
SNRPD3-201ENST00000215829 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
SNRPD3-201ENST00000215829 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
SNRPD3-201ENST00000215829 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
SNRPD3-201ENST00000215829 A4D1N5 150 aa10.35□□□□□ -0.75
SNRPD3-201ENST00000215829 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
SNRPD3-201ENST00000215829 SACSQ9NZJ4 4579 aa10.35□□□□□ -0.75
SNRPD3-201ENST00000215829 LOC107984156A0A0G2JMH3 177 aa10.34□□□□□ -0.75
SNRPD3-201ENST00000215829 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
SNRPD3-201ENST00000215829 ARL17AQ8IVW1 177 aa10.34□□□□□ -0.75
SNRPD3-201ENST00000215829 A6NDN8 102 aa10.34□□□□□ -0.75
SNRPD3-201ENST00000215829 RTL8CO15255 209 aa10.33□□□□□ -0.76
SNRPD3-201ENST00000215829 Q6ZRP5 223 aa10.33□□□□□ -0.76
SNRPD3-201ENST00000215829 NHP2Q9NX24 153 aaKnown RBP10.33□□□□□ -0.76
SNRPD3-201ENST00000215829 DNAH17Q9UFH2 4485 aa10.31□□□□□ -0.76
SNRPD3-201ENST00000215829 A0A1B0GWB2 263 aa10.31□□□□□ -0.76
SNRPD3-201ENST00000215829 CFC1BP0CG36 223 aa10.31□□□□□ -0.76
SNRPD3-201ENST00000215829 CFC1P0CG37 223 aa10.31□□□□□ -0.76
SNRPD3-201ENST00000215829 TNP2Q05952 138 aa10.31□□□□□ -0.76
SNRPD3-201ENST00000215829 COL5A1-AS1Q5SY13 56 aa10.31□□□□□ -0.76
SNRPD3-201ENST00000215829 KMT2CQ8NEZ4 4911 aaKnown RBP10.3□□□□□ -0.76
SNRPD3-201ENST00000215829 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
SNRPD3-201ENST00000215829 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
SNRPD3-201ENST00000215829 FRAS1Q86XX4 4008 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms