RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
CHPF2-201ENST00000035307 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
CHPF2-201ENST00000035307 REG3AQ06141 175 aa8.61□□□□□ -1.03
CHPF2-201ENST00000035307 CHCHD10Q8WYQ3 142 aaPredicted RBP8.61□□□□□ -1.03
CHPF2-201ENST00000035307 A0A0B4J2C4 111 aa8.6□□□□□ -1.03
CHPF2-201ENST00000035307 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
CHPF2-201ENST00000035307 NKAPP1Q8N9T2 125 aa8.6□□□□□ -1.03
CHPF2-201ENST00000035307 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
CHPF2-201ENST00000035307 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
CHPF2-201ENST00000035307 C9orf116Q5BN46 136 aaPredicted RBP8.6□□□□□ -1.03
CHPF2-201ENST00000035307 SS18L2Q9UHA2 77 aa8.6□□□□□ -1.03
CHPF2-201ENST00000035307 NANOS2P60321 138 aaKnown RBP8.58□□□□□ -1.04
CHPF2-201ENST00000035307 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
CHPF2-201ENST00000035307 CDC42SE2Q9NRR3 84 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 UBE2D3P61077 147 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 UBE2D2P62837 147 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 FHL3Q13643 280 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 FAM236AA0A1B0GUQ0 79 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 FAM236BA0A1B0GV22 79 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 NDUFA1O15239 70 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 C9orf153Q5TBE3 101 aa8.58□□□□□ -1.04
CHPF2-201ENST00000035307 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
CHPF2-201ENST00000035307 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
CHPF2-201ENST00000035307 XGP55808 180 aa8.57□□□□□ -1.04
CHPF2-201ENST00000035307 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
CHPF2-201ENST00000035307 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
CHPF2-201ENST00000035307 TIRAPP58753 221 aa8.56□□□□□ -1.04
CHPF2-201ENST00000035307 OVOL2Q9BRP0 275 aa8.56□□□□□ -1.04
CHPF2-201ENST00000035307 STAB2Q8WWQ8 2551 aa8.56□□□□□ -1.04
CHPF2-201ENST00000035307 A0A0J9YWU9 116 aa8.55□□□□□ -1.04
CHPF2-201ENST00000035307 RNF183Q96D59 192 aa8.55□□□□□ -1.04
CHPF2-201ENST00000035307 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
CHPF2-201ENST00000035307 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
CHPF2-201ENST00000035307 C11orf45Q8TAV5 145 aa8.55□□□□□ -1.04
CHPF2-201ENST00000035307 C11orf72Q8NBR9 251 aa8.54□□□□□ -1.04
CHPF2-201ENST00000035307 H3BT86 120 aa8.54□□□□□ -1.04
CHPF2-201ENST00000035307 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
CHPF2-201ENST00000035307 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
CHPF2-201ENST00000035307 UBL5Q9BZL1 73 aa8.53□□□□□ -1.04
CHPF2-201ENST00000035307 DEFB131BA0A096LNP1 70 aa8.53□□□□□ -1.04
CHPF2-201ENST00000035307 AMELXQ99217 191 aa8.53□□□□□ -1.04
CHPF2-201ENST00000035307 C6orf99Q4VX62 202 aa8.52□□□□□ -1.05
CHPF2-201ENST00000035307 Q6ZTC4 211 aa8.52□□□□□ -1.05
CHPF2-201ENST00000035307 DSCR8Q96T75 97 aa8.52□□□□□ -1.05
CHPF2-201ENST00000035307 CCL18P55774 89 aa8.52□□□□□ -1.05
CHPF2-201ENST00000035307 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
CHPF2-201ENST00000035307 TRBV30A0A0K0K1B3 111 aa8.52□□□□□ -1.05
CHPF2-201ENST00000035307 H7C423 109 aa8.51□□□□□ -1.05
CHPF2-201ENST00000035307 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
CHPF2-201ENST00000035307 Q8N3U1 123 aa8.51□□□□□ -1.05
CHPF2-201ENST00000035307 H0YGX0 51 aa8.51□□□□□ -1.05
CHPF2-201ENST00000035307 FHL2Q14192 279 aa8.51□□□□□ -1.05
CHPF2-201ENST00000035307 SMIM11BQ8TCY0 68 aa8.51□□□□□ -1.05
CHPF2-201ENST00000035307 BEAN1Q3B7T3 259 aa8.5□□□□□ -1.05
CHPF2-201ENST00000035307 UNQ6190/PRO20217Q6UXQ8 127 aa8.5□□□□□ -1.05
CHPF2-201ENST00000035307 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
CHPF2-201ENST00000035307 SPATA25Q9BR10 227 aa8.5□□□□□ -1.05
CHPF2-201ENST00000035307 CITED1Q99966 193 aa8.49□□□□□ -1.05
CHPF2-201ENST00000035307 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
CHPF2-201ENST00000035307 A8MTW9 85 aa8.49□□□□□ -1.05
CHPF2-201ENST00000035307 SCXQ7RTU7 201 aa8.49□□□□□ -1.05
CHPF2-201ENST00000035307 UBE2BP63146 152 aa8.48□□□□□ -1.05
CHPF2-201ENST00000035307 LYRM9A8MSI8 78 aa8.48□□□□□ -1.05
CHPF2-201ENST00000035307 LST1O00453 97 aa8.48□□□□□ -1.05
CHPF2-201ENST00000035307 KPRPQ5T749 579 aaPredicted RBP8.48□□□□□ -1.05
CHPF2-201ENST00000035307 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
CHPF2-201ENST00000035307 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
CHPF2-201ENST00000035307 KLK9Q2XQG4 91 aa8.47□□□□□ -1.05
CHPF2-201ENST00000035307 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
CHPF2-201ENST00000035307 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
CHPF2-201ENST00000035307 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
CHPF2-201ENST00000035307 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
CHPF2-201ENST00000035307 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.05
CHPF2-201ENST00000035307 A0A1B0GX51 115 aa8.46□□□□□ -1.05
CHPF2-201ENST00000035307 TRACP01848 142 aa8.46□□□□□ -1.06
CHPF2-201ENST00000035307 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
CHPF2-201ENST00000035307 M0R2N4 97 aa8.46□□□□□ -1.06
CHPF2-201ENST00000035307 MIFP14174 115 aa8.46□□□□□ -1.06
CHPF2-201ENST00000035307 A0A096LNI7 61 aa8.45□□□□□ -1.06
CHPF2-201ENST00000035307 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
CHPF2-201ENST00000035307 MDFIQ99750 246 aa8.45□□□□□ -1.06
CHPF2-201ENST00000035307 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.45□□□□□ -1.06
CHPF2-201ENST00000035307 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
CHPF2-201ENST00000035307 GHRHP01286 108 aa8.45□□□□□ -1.06
CHPF2-201ENST00000035307 TRAV23DV6A0A075B6W5 121 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 hADV29S1A0JD25 119 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 F8WEM9 126 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 GIG44P09565 113 aaPredicted RBP8.44□□□□□ -1.06
CHPF2-201ENST00000035307 SBSPONQ8IVN8 264 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 WFDC9Q8NEX5 89 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 KRTAP10-11P60412 298 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 ETDCA0A1B0GVM5 59 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 CD164L2Q6UWJ8 174 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
CHPF2-201ENST00000035307 NDUFV3P56181 108 aaKnown RBP8.43□□□□□ -1.06
CHPF2-201ENST00000035307 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
CHPF2-201ENST00000035307 A0A087WYN8 130 aa8.43□□□□□ -1.06
CHPF2-201ENST00000035307 ZNF469Q96JG9 3925 aaPredicted RBP8.43□□□□□ -1.06
CHPF2-201ENST00000035307 Q6ZQY7 126 aa8.43□□□□□ -1.06
CHPF2-201ENST00000035307 X6R8D5 127 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms