RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 TMEM238C9JI98 176 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 CCL25O15444 150 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 TIMM17BO60830 172 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 IGHV3-30-3P0DP02 117 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 RNF183Q96D59 192 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 VSIG2Q96IQ7 327 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 GEMIN7Q9H840 131 aaKnown RBP5.33□□□□□ -1.56
CASC19-227ENST00000641411 CDC42SE2Q9NRR3 84 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 PRO0255Q9UI72 69 aa5.33□□□□□ -1.56
CASC19-227ENST00000641411 JMJD1CQ15652 2540 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 TRAV26-1A0A087WT03 109 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 A0A0J9YXY3 114 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 A0A1W2PPM0 123 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 K7EP34 96 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 UBE2L6O14933 153 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 FABP2P12104 132 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■□□□□ 9.5
CASC19-227ENST00000641411 C12orf74Q32Q52 190 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 ZFAND6Q6FIF0 208 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 CEMP1Q6PRD7 247 aaPredicted RBP5.32□□□□□ -1.56
CASC19-227ENST00000641411 PPDPFQ9H3Y8 114 aa5.32□□□□□ -1.56
CASC19-227ENST00000641411 NHP2Q9NX24 153 aaKnown RBP5.32□□□□□ -1.56
CASC19-227ENST00000641411 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 H3BUT2 72 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 IGHV3-30P01768 117 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 IGHV3-30-5P0DP03 117 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 EGFEM1PQ0D2K5 195 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 AMMECR1LQ6DCA0 310 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 SH2D6Q7Z4S9 175 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 Q8NAQ8 132 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 SPANXCQ9NY87 97 aa5.31□□□□□ -1.56
CASC19-227ENST00000641411 IGHV4-28A0A0C4DH34 117 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 IGLL5B9A064 214 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 K7EP13 123 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 NDUFA1O15239 70 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 IGHV4-30-4P0DP06 118 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 RPL24P83731 157 aaKnown RBP5.3□□□□□ -1.56
CASC19-227ENST00000641411 KRTAP24-1Q3LI83 254 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 LYRM7Q5U5X0 104 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 FAM222AQ5U5X8 452 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 C10orf126Q8N4M7 172 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 NDUFA12Q9UI09 145 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 F8P00451 2351 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
CASC19-227ENST00000641411 BAHCC1Q9P281 2608 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 CUBNO60494 3623 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.29□□□□□ -1.56
CASC19-227ENST00000641411 A0A0B4J2C4 111 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 LOC100131303A0A0U1RQF7 123 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 F5H768 121 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 IFITM1P13164 125 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 DAD1P61803 113 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 DEFB135Q30KP9 77 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
CASC19-227ENST00000641411 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 LITAFQ99732 161 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
CASC19-227ENST00000641411 TRAV8-3A0A0A6YYJ7 113 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 SMIM1B2RUZ4 78 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 TRIAP1O43715 76 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 ATP5G1P05496 136 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 SPINK8P0C7L1 97 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 SPART-AS1P0CW21 52 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 HERV-K104P63124 156 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 SFTA2Q6UW10 78 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 COPS9Q8WXC6 57 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 SPCS1Q9Y6A9 102 aa5.28□□□□□ -1.56
CASC19-227ENST00000641411 H3BNG1 76 aa5.27□□□□□ -1.57
CASC19-227ENST00000641411 K7ERJ3 54 aa5.27□□□□□ -1.57
CASC19-227ENST00000641411 COX6A2Q02221 97 aa5.27□□□□□ -1.57
CASC19-227ENST00000641411 MIAQ16674 131 aa5.27□□□□□ -1.57
CASC19-227ENST00000641411 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
CASC19-227ENST00000641411 C11orf68Q9H3H3 251 aaKnown RBP5.27□□□□□ -1.57
CASC19-227ENST00000641411 TEP1Q99973 2627 aaKnown RBP5.27□□□□□ -1.57
CASC19-227ENST00000641411 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 CFC1BP0CG36 223 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 CFC1P0CG37 223 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 GAGE6Q13070 117 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 CIRBPQ14011 172 aaKnown RBP5.26□□□□□ -1.57
CASC19-227ENST00000641411 MRPL23Q16540 153 aaKnown RBP5.26□□□□□ -1.57
CASC19-227ENST00000641411 C3orf56Q8N813 242 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 ZNF625Q96I27 306 aaPredicted RBP5.26□□□□□ -1.57
CASC19-227ENST00000641411 PRO1854Q9UHT4 67 aa5.26□□□□□ -1.57
CASC19-227ENST00000641411 IGLV4-60A0A075B6I1 120 aa5.25□□□□□ -1.57
CASC19-227ENST00000641411 A0A087WZ39 114 aa5.25□□□□□ -1.57
CASC19-227ENST00000641411 IGHV3OR16-9A0A0B4J2B5 98 aa5.25□□□□□ -1.57
CASC19-227ENST00000641411 A4D1N5 150 aa5.25□□□□□ -1.57
CASC19-227ENST00000641411 TSPAN13O95857 204 aa5.25□□□□□ -1.57
CASC19-227ENST00000641411 TRBV20-1A0A075B6N2 111 aa5.24□□□□□ -1.57
CASC19-227ENST00000641411 F8W1H4 67 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms