RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PLEKHB2Q96CS7 222 aa12.47□□□□□ -0.41
PHGDH-209ENST00000641074 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.41
PHGDH-209ENST00000641074 BATFQ16520 125 aa12.46□□□□□ -0.41
PHGDH-209ENST00000641074 HIGD1BQ9P298 99 aa12.46□□□□□ -0.41
PHGDH-209ENST00000641074 STAB2Q8WWQ8 2551 aa12.46□□□□□ -0.41
PHGDH-209ENST00000641074 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-209ENST00000641074 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
PHGDH-209ENST00000641074 C15orf53Q8NAA6 179 aa12.44□□□□□ -0.42
PHGDH-209ENST00000641074 MEGF8Q7Z7M0 2845 aa12.44□□□□□ -0.42
PHGDH-209ENST00000641074 PRKDCP78527 4128 aaKnown RBP12.44□□□□□ -0.42
PHGDH-209ENST00000641074 SMIM1B2RUZ4 78 aa12.43□□□□□ -0.42
PHGDH-209ENST00000641074 SS18Q15532 418 aa12.43□□□□□ -0.42
PHGDH-209ENST00000641074 IGHV3OR16-9A0A0B4J2B5 98 aa12.43□□□□□ -0.42
PHGDH-209ENST00000641074 IGLV5-39A0A0G2JS06 123 aa12.43□□□□□ -0.42
PHGDH-209ENST00000641074 REG3AQ06141 175 aa12.43□□□□□ -0.42
PHGDH-209ENST00000641074 BVES-AS1Q5T3Y7 98 aa12.42□□□□□ -0.42
PHGDH-209ENST00000641074 IGLL5B9A064 214 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 CCL25O15444 150 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 IGHV3-33P01772 117 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 HSD52Q0P140 79 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 SCGB1D4Q6XE38 83 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 XCL1P47992 114 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 KLK12Q9UKR0 248 aa12.41□□□□□ -0.42
PHGDH-209ENST00000641074 LBHQ53QV2 105 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-209ENST00000641074 C5orf38Q86SI9 138 aa12.39□□□□□ -0.43
PHGDH-209ENST00000641074 PRR34Q9NV39 138 aa12.39□□□□□ -0.43
PHGDH-209ENST00000641074 A0A087WZ39 114 aa12.38□□□□□ -0.43
PHGDH-209ENST00000641074 ZFAND6Q6FIF0 208 aa12.38□□□□□ -0.43
PHGDH-209ENST00000641074 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
PHGDH-209ENST00000641074 NDUFA12Q9UI09 145 aa12.38□□□□□ -0.43
PHGDH-209ENST00000641074 IGLV10-54A0A075B6I4 117 aa12.38□□□□□ -0.43
PHGDH-209ENST00000641074 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
PHGDH-209ENST00000641074 CHCHD10Q8WYQ3 142 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-209ENST00000641074 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
PHGDH-209ENST00000641074 CD164L2Q6UWJ8 174 aa12.35□□□□□ -0.43
PHGDH-209ENST00000641074 HIST1H4GQ99525 98 aa12.35□□□□□ -0.43
PHGDH-209ENST00000641074 A0A0J9YXY3 114 aa12.35□□□□□ -0.43
PHGDH-209ENST00000641074 GCSHP23434 173 aa12.35□□□□□ -0.43
PHGDH-209ENST00000641074 TAL2Q16559 108 aa12.35□□□□□ -0.43
PHGDH-209ENST00000641074 NDUFA1O15239 70 aa12.34□□□□□ -0.43
PHGDH-209ENST00000641074 LINC01556Q5JQF7 62 aa12.34□□□□□ -0.43
PHGDH-209ENST00000641074 COL5A1-AS1Q5SY13 56 aa12.34□□□□□ -0.43
PHGDH-209ENST00000641074 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
PHGDH-209ENST00000641074 CEND1Q8N111 149 aa12.33□□□□□ -0.44
PHGDH-209ENST00000641074 UBE2WQ96B02 151 aa12.33□□□□□ -0.44
PHGDH-209ENST00000641074 CCL18P55774 89 aa12.33□□□□□ -0.44
PHGDH-209ENST00000641074 TM2D2Q9BX73 214 aa12.33□□□□□ -0.44
PHGDH-209ENST00000641074 CRPP02741 224 aa12.32□□□□□ -0.44
PHGDH-209ENST00000641074 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
PHGDH-209ENST00000641074 COX7B2Q8TF08 81 aa12.32□□□□□ -0.44
PHGDH-209ENST00000641074 Q9H8V8 135 aa12.32□□□□□ -0.44
PHGDH-209ENST00000641074 K7EP13 123 aa12.31□□□□□ -0.44
PHGDH-209ENST00000641074 DNAH10OSP0CZ25 163 aa12.31□□□□□ -0.44
PHGDH-209ENST00000641074 FXYD2P54710 66 aa12.31□□□□□ -0.44
PHGDH-209ENST00000641074 FOXI1Q12951 378 aa12.31□□□□□ -0.44
PHGDH-209ENST00000641074 ZNF625Q96I27 306 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-209ENST00000641074 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-209ENST00000641074 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
PHGDH-209ENST00000641074 COX7A2LO14548 114 aa12.3□□□□□ -0.44
PHGDH-209ENST00000641074 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
PHGDH-209ENST00000641074 GAGE12HA6NDE8 117 aa12.3□□□□□ -0.44
PHGDH-209ENST00000641074 DYNC2H1Q8NCM8 4307 aaKnown RBP12.29□□□□□ -0.44
PHGDH-209ENST00000641074 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
PHGDH-209ENST00000641074 LITAFQ99732 161 aa12.29□□□□□ -0.44
PHGDH-209ENST00000641074 MIAQ16674 131 aa12.28□□□□□ -0.44
PHGDH-209ENST00000641074 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
PHGDH-209ENST00000641074 TMEM238C9JI98 176 aa12.28□□□□□ -0.44
PHGDH-209ENST00000641074 PTTG1IPP53801 180 aa12.28□□□□□ -0.44
PHGDH-209ENST00000641074 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
PHGDH-209ENST00000641074 UPK3BQ9BT76 320 aa12.27□□□□□ -0.45
PHGDH-209ENST00000641074 A6NDN8 102 aa12.26□□□□□ -0.45
PHGDH-209ENST00000641074 MALP21145 153 aa12.26□□□□□ -0.45
PHGDH-209ENST00000641074 A0A1B0GV90 55 aa12.25□□□□□ -0.45
PHGDH-209ENST00000641074 HERV-K104P63124 156 aa12.25□□□□□ -0.45
PHGDH-209ENST00000641074 CSMD3Q7Z407 3707 aa12.25□□□□□ -0.45
PHGDH-209ENST00000641074 TIMM17BO60830 172 aa12.25□□□□□ -0.45
PHGDH-209ENST00000641074 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
PHGDH-209ENST00000641074 Q8IZM0 81 aa12.25□□□□□ -0.45
PHGDH-209ENST00000641074 NUPR2A6NF83 97 aa12.24□□□□□ -0.45
PHGDH-209ENST00000641074 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
PHGDH-209ENST00000641074 TAX1BP3O14907 124 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 PRSS2P07478 247 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 Q6ZVH6 145 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 DNAH7Q8WXX0 4024 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 CIRBPQ14011 172 aaKnown RBP12.23□□□□□ -0.45
PHGDH-209ENST00000641074 KIAA0087Q14695 138 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 SPANXDQ9BXN6 97 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 NHP2Q9NX24 153 aaKnown RBP12.23□□□□□ -0.45
PHGDH-209ENST00000641074 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
PHGDH-209ENST00000641074 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
PHGDH-209ENST00000641074 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-209ENST00000641074 FBN3Q75N90 2809 aa12.21□□□□□ -0.45
PHGDH-209ENST00000641074 K7ERJ3 54 aa12.21□□□□□ -0.45
PHGDH-209ENST00000641074 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.45
PHGDH-209ENST00000641074 DAND5Q8N907 189 aa12.21□□□□□ -0.45
PHGDH-209ENST00000641074 A0A0U1RRA0 63 aa12.2□□□□□ -0.46
PHGDH-209ENST00000641074 IBA57-AS1B1ANH7 110 aa12.2□□□□□ -0.46
PHGDH-209ENST00000641074 APOMO95445 188 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms