RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 C15orf53Q8NAA6 179 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 C11orf72Q8NBR9 251 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 LINC01006Q8NI28 216 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 TMEM263Q8WUH6 116 aaKnown RBP4.62□□□□□ -1.67
SCARB2-224ENST00000640880 UBE2E2Q96LR5 201 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 ODF3Q96PU9 254 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 TIMM17AQ99595 171 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 DPH3P1Q9H4G8 78 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 SMAD5-AS1Q9Y6J3 95 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 F8P00451 2351 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 CSMD2Q7Z408 3487 aa4.62□□□□□ -1.67
SCARB2-224ENST00000640880 ABCA2Q9BZC7 2435 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 IGLV4-69A0A075B6H9 119 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 TRAV2A0A0B4J234 112 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 H3BMM0 161 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 M0R1W7 72 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 M0R2P5 195 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 LEPROTO15243 131 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 APELAP0DMC3 54 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 MEIG1Q5JSS6 88 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 UBE2WQ96B02 151 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 DNAJC30Q96LL9 226 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 ITPR3Q14573 2671 aa4.61□□□□□ -1.67
SCARB2-224ENST00000640880 HIVEP2P31629 2446 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 SDHAF1A6NFY7 115 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 IGIPA6NJ69 53 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 J3QQQ9 107 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 LGALS3P17931 250 aaKnown RBP4.6□□□□□ -1.67
SCARB2-224ENST00000640880 RPL18AQ02543 176 aaKnown RBP4.6□□□□□ -1.67
SCARB2-224ENST00000640880 TMEM170BQ5T4T1 132 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 VMO1Q7Z5L0 202 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 AMELXQ99217 191 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 AGPAT4-IT1Q9H0P7 198 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 VPREB3Q9UKI3 123 aa4.6□□□□□ -1.67
SCARB2-224ENST00000640880 FLNAP21333 2647 aaKnown RBP4.6□□□□□ -1.67
SCARB2-224ENST00000640880 TACC2O95359 2948 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 TRAV26-2A0A0B4J265 109 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 A0A1B0GX51 115 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 BRI3O95415 125 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 IGHV1-69P01742 117 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 CRYGDP07320 174 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 CTSGP08311 255 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 CXCL5P42830 114 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 LY6G5BQ8NDX9 201 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 LINC01587Q99440 93 aa4.59□□□□□ -1.67
SCARB2-224ENST00000640880 TRAV21A0A0B4J279 112 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 OOSP1A8MZH6 123 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 COX6CP09669 75 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
SCARB2-224ENST00000640880 EBI3Q14213 229 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 C5orf47Q569G3 176 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 SFTA2Q6UW10 78 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 LINC00477Q96M19 166 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 TNCP24821 2201 aa4.58□□□□□ -1.68
SCARB2-224ENST00000640880 TEX15Q9BXT5 2789 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 IGHV3-74A0A0B4J1X5 117 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 IGHV3OR16-9A0A0B4J2B5 98 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 TRBV6-5A0A0K0K1A5 114 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 OVOL1O14753 267 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 UQCRQO14949 82 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 NPFFO15130 113 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 TSPEAR-AS2P59090 65 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 RHOHQ15669 191 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 C2orf82Q6UX34 121 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 BRD3OSQ6XYD6 125 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 Q6ZQT7 251 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 GPHB5Q86YW7 130 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 LINC00612Q8N6U2 182 aa4.57□□□□□ -1.68
SCARB2-224ENST00000640880 OTOGQ6ZRI0 2925 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 ACANP16112 2415 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 MAST4O15021 2626 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 J3KT08 172 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 POLR2KP53803 58 aaKnown RBP4.56□□□□□ -1.68
SCARB2-224ENST00000640880 LINC00643Q86TS7 51 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 MUSTN1Q8IVN3 82 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 C3orf22Q8N5N4 141 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 Q8N6K4 173 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 RPL39LQ96EH5 51 aaKnown RBP4.56□□□□□ -1.68
SCARB2-224ENST00000640880 LINC00526Q96FQ7 95 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 TP53TG1Q9Y2A0 90 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 PHLDA3Q9Y5J5 127 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 KIF25-AS1Q9Y6Z4 181 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 AGRNO00468 2067 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 CSPG4Q6UVK1 2322 aa4.56□□□□□ -1.68
SCARB2-224ENST00000640880 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 TRBV27A0A0K0K1C4 114 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 A6NDX4 124 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 LST1O00453 97 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 TIMM17BO60830 172 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 S100A4P26447 101 aaKnown RBP4.55□□□□□ -1.68
SCARB2-224ENST00000640880 UBE2AP49459 152 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 PRB3Q04118 309 aaPredicted RBP4.55□□□□□ -1.68
SCARB2-224ENST00000640880 ZNF56Q15929 161 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 DEFB112Q30KQ8 113 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 MINOS1Q5TGZ0 78 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 SDIM1Q6ZPB5 146 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms