RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 TRAV8-4A0A0B4J246 113 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 A0A0J9YXV3 536 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 hDV102S1A0JD36 115 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 ZNF561-AS1K7EIQ3 104 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 K7EP13 123 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 PMVKQ15126 192 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC00173Q6ZV60 143 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 URB1-AS1Q96HZ7 61 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 TIMM21Q9BVV7 248 aa3.9□□□□□ -1.79
HNRNPU-220ENST00000639667 COX7A2LO14548 114 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 PRSS2P07478 247 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 FUSP35637 526 aaKnown RBP eCLIP3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC00526Q96FQ7 95 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 TIMM17AQ99595 171 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 MIEN1Q9BRT3 115 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 PRO1933Q9H354 126 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 APOMO95445 188 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 TNP2Q05952 138 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 Q6ZR54 194 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 USP17L23D6RBM5 183 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 CDPF1Q6NVV7 123 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 PYGO1Q9Y3Y4 419 aa3.89□□□□□ -1.79
HNRNPU-220ENST00000639667 SEC11AP67812 179 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 MRPS36P82909 103 aaKnown RBP3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 CHAC1Q9BUX1 264 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 CST9LQ9H4G1 147 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 H3BRM9 83 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 IGIPA6NJ69 53 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 DLEU1O43261 78 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 CD164L2Q6UWJ8 174 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 UQCR10Q9UDW1 63 aa3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 CSDC2Q9Y534 153 aaKnown RBP3.88□□□□□ -1.79
HNRNPU-220ENST00000639667 SPINK8P0C7L1 97 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 HERVK_113P63121 156 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 C14orf177Q52M58 125 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 TMEM238C9JI98 176 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 SPATA12Q7Z6I5 190 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 A0A096LNJ9 63 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 RTL8CO15255 209 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC00310P59036 64 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 SPAG11BQ08648 103 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC00336Q6ZUF6 198 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 PRR34Q9NV39 138 aa3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 MRPL35Q9NZE8 188 aaKnown RBP3.87□□□□□ -1.79
HNRNPU-220ENST00000639667 IGLV5-52A0A0A0MRZ9 124 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 UBE2D1P51668 147 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 CKS1BP61024 79 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 COX6A2Q02221 97 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 CAMK2N2Q96S95 79 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 A0A087WTM6 91 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 IGHV1-58A0A0C4DH39 117 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 HERVK_113P61574 105 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC00242Q5T6M2 205 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 ATOH7Q8N100 152 aa3.86□□□□□ -1.79
HNRNPU-220ENST00000639667 DPM2O94777 84 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC01620Q4KN68 170 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 STARD9Q9P2P6 4700 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 C11orf86A6NJI1 115 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 C3orf79P0CE67 100 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 WFDC2Q14508 124 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 SPATA45Q537H7 98 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 PET117Q6UWS5 81 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 AMELXQ99217 191 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 PLECQ15149 4684 aaKnown RBP3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 IGKCP01834 107 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 FOXI1Q12951 378 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 COL5A1-AS1Q5SY13 56 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
HNRNPU-220ENST00000639667 A0A0U1RRA0 63 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 LINC01546A6NGU7 62 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 C16orf90A8MZG2 172 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 F8VRH5 84 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 SYS1-DBNDD2H3BUS1 97 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 C4orf48Q5BLP8 95 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 ZNF625Q96I27 306 aaPredicted RBP3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 PAM16Q9Y3D7 125 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 NPSP0C0P6 89 aa3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 HNRNPA3P51991 378 aaKnown RBP3.84□□□□□ -1.79
HNRNPU-220ENST00000639667 IGLV4-69A0A075B6H9 119 aa3.84□□□□□ -1.8
HNRNPU-220ENST00000639667 IGKV2-24A0A0C4DH68 120 aa3.84□□□□□ -1.8
HNRNPU-220ENST00000639667 SNHG12Q9BXW3 62 aa3.84□□□□□ -1.8
HNRNPU-220ENST00000639667 RPL18AQ02543 176 aaKnown RBP3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 SYCNQ0VAF6 134 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 GAGE2BQ13066 116 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 MEIG1Q5JSS6 88 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 NDUFA1O15239 70 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 IGLC3P0DOY3 106 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 LGALS3P17931 250 aaKnown RBP3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 C2orf82Q6UX34 121 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 CARD19Q96LW7 228 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 TRAV12-1A0A0B4J245 112 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 ZNF22P17026 224 aaPredicted RBP3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 Q8N814 137 aa3.83□□□□□ -1.8
HNRNPU-220ENST00000639667 COX7B2Q8TF08 81 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms