RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SPACA4Q8TDM5 124 aa12.5□□□□□ -0.41
CACNA1A-253ENST00000637927 IGLV4-3A0A075B6K6 122 aa12.5□□□□□ -0.41
CACNA1A-253ENST00000637927 MRPS12O15235 138 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-253ENST00000637927 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
CACNA1A-253ENST00000637927 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
CACNA1A-253ENST00000637927 FAM19A3Q7Z5A8 133 aa12.49□□□□□ -0.41
CACNA1A-253ENST00000637927 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-253ENST00000637927 ALPK3Q96L96 1907 aa12.49□□□□□ -0.41
CACNA1A-253ENST00000637927 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
CACNA1A-253ENST00000637927 RBX1P62877 108 aa12.48□□□□□ -0.41
CACNA1A-253ENST00000637927 PRR14LQ5THK1 2151 aa12.48□□□□□ -0.41
CACNA1A-253ENST00000637927 C1orf195Q5TG92 126 aa12.47□□□□□ -0.41
CACNA1A-253ENST00000637927 REG3GQ6UW15 175 aa12.47□□□□□ -0.41
CACNA1A-253ENST00000637927 RAI1Q7Z5J4 1906 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-253ENST00000637927 K7EQG2 157 aa12.47□□□□□ -0.41
CACNA1A-253ENST00000637927 M0R378 163 aa12.46□□□□□ -0.41
CACNA1A-253ENST00000637927 PDE6GP18545 87 aa12.46□□□□□ -0.41
CACNA1A-253ENST00000637927 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.42
CACNA1A-253ENST00000637927 ZNF702PQ9H963 129 aa12.45□□□□□ -0.42
CACNA1A-253ENST00000637927 LST1O00453 97 aa12.45□□□□□ -0.42
CACNA1A-253ENST00000637927 A8MTW9 85 aa12.45□□□□□ -0.42
CACNA1A-253ENST00000637927 CRIP1P50238 77 aa12.44□□□□□ -0.42
CACNA1A-253ENST00000637927 LINC00959A0A1B0GUT2 108 aa12.44□□□□□ -0.42
CACNA1A-253ENST00000637927 CCDC179H3BU77 68 aa12.44□□□□□ -0.42
CACNA1A-253ENST00000637927 C2orf48Q96LS8 159 aa12.44□□□□□ -0.42
CACNA1A-253ENST00000637927 RPL28P46779 137 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-253ENST00000637927 C1orf134Q5TEV5 83 aa12.43□□□□□ -0.42
CACNA1A-253ENST00000637927 DHRS4-AS1Q9P1J3 65 aa12.43□□□□□ -0.42
CACNA1A-253ENST00000637927 HIGD1BQ9P298 99 aa12.43□□□□□ -0.42
CACNA1A-253ENST00000637927 PLXNB1O43157 2135 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 ZNF22P17026 224 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 Q9BRP9 147 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 FBXL19-AS1Q494R0 122 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 Q6ZPA2 131 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 CDSNQ15517 529 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 UNQ6190/PRO20217Q6UXQ8 127 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 COX6A2Q02221 97 aa12.42□□□□□ -0.42
CACNA1A-253ENST00000637927 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-253ENST00000637927 RNASE3P12724 160 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-253ENST00000637927 SPINT4Q6UDR6 99 aa12.41□□□□□ -0.42
CACNA1A-253ENST00000637927 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
CACNA1A-253ENST00000637927 NOTCH2Q04721 2471 aa12.41□□□□□ -0.42
CACNA1A-253ENST00000637927 SMIM9A6NGZ8 99 aa12.41□□□□□ -0.42
CACNA1A-253ENST00000637927 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
CACNA1A-253ENST00000637927 Q6ZTC4 211 aa12.4□□□□□ -0.42
CACNA1A-253ENST00000637927 M0QY20 66 aa12.39□□□□□ -0.43
CACNA1A-253ENST00000637927 UQCRQO14949 82 aa12.38□□□□□ -0.43
CACNA1A-253ENST00000637927 PRR9Q5T870 116 aa12.38□□□□□ -0.43
CACNA1A-253ENST00000637927 IBA57-AS1B1ANH7 110 aa12.38□□□□□ -0.43
CACNA1A-253ENST00000637927 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
CACNA1A-253ENST00000637927 U3KQK5 164 aa12.37□□□□□ -0.43
CACNA1A-253ENST00000637927 SONP18583 2426 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-253ENST00000637927 LTBP2Q14767 1821 aa12.37□□□□□ -0.43
CACNA1A-253ENST00000637927 A0A087WVE0 104 aa12.37□□□□□ -0.43
CACNA1A-253ENST00000637927 C11orf71Q6IPW1 123 aa12.37□□□□□ -0.43
CACNA1A-253ENST00000637927 LELP1Q5T871 98 aa12.36□□□□□ -0.43
CACNA1A-253ENST00000637927 H0Y9P7 68 aa12.36□□□□□ -0.43
CACNA1A-253ENST00000637927 CD164L2Q6UWJ8 174 aa12.36□□□□□ -0.43
CACNA1A-253ENST00000637927 TRBV30A0A0K0K1B3 111 aa12.36□□□□□ -0.43
CACNA1A-253ENST00000637927 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
CACNA1A-253ENST00000637927 TECTAO75443 2155 aa12.35□□□□□ -0.43
CACNA1A-253ENST00000637927 LINC00474Q9P2X8 69 aa12.35□□□□□ -0.43
CACNA1A-253ENST00000637927 KRTAP10-9P60411 292 aa12.35□□□□□ -0.43
CACNA1A-253ENST00000637927 MBD6Q96DN6 1003 aa12.35□□□□□ -0.43
CACNA1A-253ENST00000637927 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-253ENST00000637927 MUC6Q6W4X9 2439 aa12.34□□□□□ -0.43
CACNA1A-253ENST00000637927 J3QL48 77 aa12.33□□□□□ -0.44
CACNA1A-253ENST00000637927 GAS8-AS1O95177 125 aa12.33□□□□□ -0.44
CACNA1A-253ENST00000637927 ODF3Q96PU9 254 aa12.33□□□□□ -0.44
CACNA1A-253ENST00000637927 TRBV10-3A0A0K0K1G6 114 aa12.33□□□□□ -0.44
CACNA1A-253ENST00000637927 C11orf1Q9H5F2 150 aa12.33□□□□□ -0.44
CACNA1A-253ENST00000637927 A0A087WSZ3 146 aa12.32□□□□□ -0.44
CACNA1A-253ENST00000637927 A0A087WYN8 130 aa12.32□□□□□ -0.44
CACNA1A-253ENST00000637927 H7C423 109 aa12.32□□□□□ -0.44
CACNA1A-253ENST00000637927 OTOGLQ3ZCN5 2332 aa12.31□□□□□ -0.44
CACNA1A-253ENST00000637927 TSHBP01222 138 aa12.31□□□□□ -0.44
CACNA1A-253ENST00000637927 TRBV6-4A0A1B0GX49 114 aa12.3□□□□□ -0.44
CACNA1A-253ENST00000637927 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
CACNA1A-253ENST00000637927 PTPN13Q12923 2485 aa12.3□□□□□ -0.44
CACNA1A-253ENST00000637927 ZNF295-AS1Q8N0V1 137 aa12.29□□□□□ -0.44
CACNA1A-253ENST00000637927 LINC00575Q6W349 94 aa12.29□□□□□ -0.44
CACNA1A-253ENST00000637927 HIVEP2P31629 2446 aa12.29□□□□□ -0.44
CACNA1A-253ENST00000637927 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
CACNA1A-253ENST00000637927 AVPP01185 164 aa12.28□□□□□ -0.44
CACNA1A-253ENST00000637927 SPG11Q96JI7 2443 aa12.28□□□□□ -0.44
CACNA1A-253ENST00000637927 P0C879 139 aa12.28□□□□□ -0.44
CACNA1A-253ENST00000637927 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.44
CACNA1A-253ENST00000637927 AGRNO00468 2067 aa12.27□□□□□ -0.45
CACNA1A-253ENST00000637927 C11orf21Q9P2W6 132 aa12.26□□□□□ -0.45
CACNA1A-253ENST00000637927 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
CACNA1A-253ENST00000637927 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
CACNA1A-253ENST00000637927 CRIP3Q6Q6R5 217 aa12.25□□□□□ -0.45
CACNA1A-253ENST00000637927 EML5Q05BV3 1969 aa12.25□□□□□ -0.45
CACNA1A-253ENST00000637927 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-253ENST00000637927 MOBPQ13875 183 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms