RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 C3orf84H3BNL1 204 aa15.19■□□□□ 0.02
SMARCA2-227ENST00000634760 RPL28P46779 137 aaKnown RBP15.19■□□□□ 0.02
SMARCA2-227ENST00000634760 AMELXQ99217 191 aa15.19■□□□□ 0.02
SMARCA2-227ENST00000634760 BEAN1Q3B7T3 259 aa15.18■□□□□ 0.02
SMARCA2-227ENST00000634760 A0A0J9YWU9 116 aa15.18■□□□□ 0.02
SMARCA2-227ENST00000634760 PLAC8L1A1L4L8 177 aa15.18■□□□□ 0.02
SMARCA2-227ENST00000634760 COX7CP15954 63 aa15.18■□□□□ 0.02
SMARCA2-227ENST00000634760 NUPR2A6NF83 97 aa15.17■□□□□ 0.02
SMARCA2-227ENST00000634760 CPAMD8Q8IZJ3 1885 aa15.17■□□□□ 0.02
SMARCA2-227ENST00000634760 K7ERS5 55 aa15.15■□□□□ 0.02
SMARCA2-227ENST00000634760 NANOS2P60321 138 aaKnown RBP15.15■□□□□ 0.02
SMARCA2-227ENST00000634760 LRCOL1A6NCL2 159 aa15.15■□□□□ 0.02
SMARCA2-227ENST00000634760 PCNX1Q96RV3 2341 aa15.14■□□□□ 0.01
SMARCA2-227ENST00000634760 FHL2Q14192 279 aa15.14■□□□□ 0.01
SMARCA2-227ENST00000634760 C10orf25Q5T742 122 aa15.13■□□□□ 0.01
SMARCA2-227ENST00000634760 Q8N814 137 aa15.13■□□□□ 0.01
SMARCA2-227ENST00000634760 DSCAMO60469 2012 aa15.13■□□□□ 0.01
SMARCA2-227ENST00000634760 PRM2P04554 102 aa15.12■□□□□ 0.01
SMARCA2-227ENST00000634760 LINC00526Q96FQ7 95 aa15.12■□□□□ 0.01
SMARCA2-227ENST00000634760 CACNA1HO95180 2353 aa15.12■□□□□ 0.01
SMARCA2-227ENST00000634760 MPLKIPQ8TAP9 179 aa15.11■□□□□ 0.01
SMARCA2-227ENST00000634760 EDN2P20800 178 aa15.11■□□□□ 0.01
SMARCA2-227ENST00000634760 NTM-AS1Q6ZSK4 140 aa15.11■□□□□ 0.01
SMARCA2-227ENST00000634760 RPL37AP8A6NKH3 93 aa15.11■□□□□ 0.01
SMARCA2-227ENST00000634760 SPTAN1Q13813 2472 aaKnown RBP15.11■□□□□ 0.01
SMARCA2-227ENST00000634760 IGLV2-18A0A075B6J9 118 aa15.09■□□□□ 0.01
SMARCA2-227ENST00000634760 A0A1B0GUV1 79 aa15.09■□□□□ 0.01
SMARCA2-227ENST00000634760 PPDPFQ9H3Y8 114 aa15.09■□□□□ 0.01
SMARCA2-227ENST00000634760 COX6A2Q02221 97 aa15.09■□□□□ 0.01
SMARCA2-227ENST00000634760 REG3GQ6UW15 175 aa15.08■□□□□ 0.01
SMARCA2-227ENST00000634760 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.08■□□□□ 03e-6■■■■■ 28.5
SMARCA2-227ENST00000634760 M0QXV9 152 aa15.08■□□□□ 0
SMARCA2-227ENST00000634760 XGP55808 180 aa15.07■□□□□ 0
SMARCA2-227ENST00000634760 C2orf48Q96LS8 159 aa15.07■□□□□ 0
SMARCA2-227ENST00000634760 UNQ6190/PRO20217Q6UXQ8 127 aa15.06■□□□□ 0
SMARCA2-227ENST00000634760 WFDC13Q8IUB5 93 aa15.06■□□□□ 0
SMARCA2-227ENST00000634760 LINC01546A6NGU7 62 aa15.05■□□□□ 0
SMARCA2-227ENST00000634760 TRAV7A0A075B6U4 112 aa15.05■□□□□ -0
SMARCA2-227ENST00000634760 TSPEAR-AS2P59090 65 aa15.04■□□□□ -0
SMARCA2-227ENST00000634760 SPTSSBQ8NFR3 76 aa15.04■□□□□ -0
SMARCA2-227ENST00000634760 Q8N9L7 120 aa15.04■□□□□ -0
SMARCA2-227ENST00000634760 HCFC1P51610 2035 aa15.04■□□□□ -0
SMARCA2-227ENST00000634760 TRBV10-3A0A0K0K1G6 114 aa15.03■□□□□ -0
SMARCA2-227ENST00000634760 ABCA1O95477 2261 aa15.03■□□□□ -0
SMARCA2-227ENST00000634760 IGLV4-60A0A075B6I1 120 aa15.02■□□□□ -0
SMARCA2-227ENST00000634760 PRYO14603 147 aa15.02■□□□□ -0
SMARCA2-227ENST00000634760 SNURFQ9Y675 71 aa15.02■□□□□ -0
SMARCA2-227ENST00000634760 ADAMTS20P59510 1910 aa15.02□□□□□ -0.01
SMARCA2-227ENST00000634760 M0R2N4 97 aa15.02□□□□□ -0.01
SMARCA2-227ENST00000634760 OXLD1Q5BKU9 147 aa15.02□□□□□ -0.01
SMARCA2-227ENST00000634760 SVIPQ8NHG7 77 aa15.02□□□□□ -0.01
SMARCA2-227ENST00000634760 LINC00694P0DN24 101 aa15.01□□□□□ -0.01
SMARCA2-227ENST00000634760 IGLV9-49A0A0B4J1Y8 123 aa15.01□□□□□ -0.01
SMARCA2-227ENST00000634760 LY6G6CO95867 125 aa15□□□□□ -0.01
SMARCA2-227ENST00000634760 A0A096LNJ9 63 aa15□□□□□ -0.01
SMARCA2-227ENST00000634760 KRTAP10-9P60411 292 aa14.99□□□□□ -0.01
SMARCA2-227ENST00000634760 C1orf137Q5JT78 98 aa14.99□□□□□ -0.01
SMARCA2-227ENST00000634760 SPINK6Q6UWN8 80 aa14.99□□□□□ -0.01
SMARCA2-227ENST00000634760 Q8N2B8 174 aa14.99□□□□□ -0.01
SMARCA2-227ENST00000634760 HRCT1Q6UXD1 115 aa14.98□□□□□ -0.01
SMARCA2-227ENST00000634760 A0A087WYN8 130 aa14.98□□□□□ -0.01
SMARCA2-227ENST00000634760 CCDC179H3BU77 68 aa14.98□□□□□ -0.01
SMARCA2-227ENST00000634760 FAM30AQ9NZY2 134 aa14.98□□□□□ -0.01
SMARCA2-227ENST00000634760 SERP1Q9Y6X1 66 aa14.97□□□□□ -0.01
SMARCA2-227ENST00000634760 ADAMTSL4-AS1Q5T5F5 129 aa14.96□□□□□ -0.01
SMARCA2-227ENST00000634760 A0A1W2PPR1 153 aa14.96□□□□□ -0.02
SMARCA2-227ENST00000634760 RAI1Q7Z5J4 1906 aaPredicted RBP14.95□□□□□ -0.02
SMARCA2-227ENST00000634760 DOPEY2Q9Y3R5 2298 aa14.94□□□□□ -0.02
SMARCA2-227ENST00000634760 C6orf223Q8N319 242 aa14.94□□□□□ -0.02
SMARCA2-227ENST00000634760 C9orf116Q5BN46 136 aaPredicted RBP14.93□□□□□ -0.02
SMARCA2-227ENST00000634760 Q6ZSN1 163 aa14.93□□□□□ -0.02
SMARCA2-227ENST00000634760 LYPD5Q6UWN5 251 aa14.93□□□□□ -0.02
SMARCA2-227ENST00000634760 RETNQ9HD89 108 aa14.92□□□□□ -0.02
SMARCA2-227ENST00000634760 Q6ZTC4 211 aa14.92□□□□□ -0.02
SMARCA2-227ENST00000634760 ZFHX2Q9C0A1 2572 aaPredicted RBP14.92□□□□□ -0.02
SMARCA2-227ENST00000634760 SMIM26A0A096LP01 95 aa14.91□□□□□ -0.02
SMARCA2-227ENST00000634760 SMR3AQ99954 134 aa14.91□□□□□ -0.02
SMARCA2-227ENST00000634760 KIF25-AS1Q9Y6Z4 181 aa14.9□□□□□ -0.02
SMARCA2-227ENST00000634760 CACNA1GO43497 2377 aa14.9□□□□□ -0.02
SMARCA2-227ENST00000634760 HIVEP2P31629 2446 aa14.89□□□□□ -0.03
SMARCA2-227ENST00000634760 ANKHD1Q8IWZ3 2542 aaKnown RBP14.89□□□□□ -0.03
SMARCA2-227ENST00000634760 EML5Q05BV3 1969 aa14.89□□□□□ -0.03
SMARCA2-227ENST00000634760 IGLV5-52A0A0A0MRZ9 124 aa14.88□□□□□ -0.03
SMARCA2-227ENST00000634760 FAM19A4Q96LR4 140 aa14.88□□□□□ -0.03
SMARCA2-227ENST00000634760 EXPH5Q8NEV8 1989 aa14.88□□□□□ -0.03
SMARCA2-227ENST00000634760 NBASA2RRP1 2371 aa14.88□□□□□ -0.03
SMARCA2-227ENST00000634760 LINC00575Q6W349 94 aa14.88□□□□□ -0.03
SMARCA2-227ENST00000634760 MUC6Q6W4X9 2439 aa14.86□□□□□ -0.03
SMARCA2-227ENST00000634760 ESRGQ1W209 222 aa14.86□□□□□ -0.03
SMARCA2-227ENST00000634760 A6NED7 52 aa14.86□□□□□ -0.03
SMARCA2-227ENST00000634760 Q9BRP9 147 aa14.85□□□□□ -0.03
SMARCA2-227ENST00000634760 C11orf72Q8NBR9 251 aa14.85□□□□□ -0.03
SMARCA2-227ENST00000634760 CREBBPQ92793 2442 aa14.85□□□□□ -0.03
SMARCA2-227ENST00000634760 PLCE1Q9P212 2302 aa14.84□□□□□ -0.03
SMARCA2-227ENST00000634760 IGLV5-39A0A0G2JS06 123 aa14.84□□□□□ -0.03
SMARCA2-227ENST00000634760 TANC2Q9HCD6 1990 aa14.83□□□□□ -0.04
SMARCA2-227ENST00000634760 NHLRC4P0CG21 123 aaPredicted RBP14.83□□□□□ -0.04
SMARCA2-227ENST00000634760 PRR3P79522 188 aaKnown RBP14.82□□□□□ -0.04
SMARCA2-227ENST00000634760 MED13LQ71F56 2210 aa14.8□□□□□ -0.04
SMARCA2-227ENST00000634760 CELA1Q9UNI1 258 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms