RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 ARFGEF1Q9Y6D6 1849 aa2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 MDC1Q14676 2089 aaKnown RBP2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 CTXND1A0A1B0GTU2 59 aa2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 M0R3E3 92 aa2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 FXYD1O00168 92 aa2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 MGPP08493 103 aa2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 PDCD11Q14690 1871 aaKnown RBP2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 FN1P02751 2386 aaKnown RBP2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 FREM1Q5H8C1 2179 aa2.66□□□□□ -1.98
RNU6-538P-201ENST00000622329 PCDH15Q96QU1 1955 aa2.65□□□□□ -1.98
RNU6-538P-201ENST00000622329 COX8AP10176 69 aa2.65□□□□□ -1.99
RNU6-538P-201ENST00000622329 LAMA4Q16363 1823 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 TRGV2A0A075B6R0 118 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 A0A087WXM4 84 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 SFTA3P0C7M3 94 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 GCHFRP30047 84 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 ZNF137PP52743 207 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 PROK2Q9HC23 129 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 LINC00846Q9NV44 126 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 UBE2D4Q9Y2X8 147 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 GBF1Q92538 1859 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 DOCK10Q96BY6 2186 aa2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 TARBP1Q13395 1621 aaKnown RBP2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 PRRC2BQ5JSZ5 2229 aaKnown RBP2.64□□□□□ -1.99
RNU6-538P-201ENST00000622329 HCRTO43612 131 aa2.63□□□□□ -1.99
RNU6-538P-201ENST00000622329 ATP5EP2Q5VTU8 51 aa2.63□□□□□ -1.99
RNU6-538P-201ENST00000622329 RGPD1P0DJD0 1748 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 ARFGEF2Q9Y6D5 1785 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 PREX2Q70Z35 1606 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 A0A087WVE0 104 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 IFI27P40305 119 aaPredicted RBP2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 CAV3P56539 151 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 SMIM4Q8WVI0 70 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 Q96NJ1 140 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 ASXL1Q8IXJ9 1541 aa2.62□□□□□ -1.99
RNU6-538P-201ENST00000622329 LOC285556D6RIA3 1793 aa2.61□□□□□ -1.99
RNU6-538P-201ENST00000622329 COX17Q14061 63 aa2.61□□□□□ -1.99
RNU6-538P-201ENST00000622329 Q6ZQY7 126 aa2.61□□□□□ -1.99
RNU6-538P-201ENST00000622329 FDCSPQ8NFU4 85 aa2.61□□□□□ -1.99
RNU6-538P-201ENST00000622329 SCN7AQ01118 1682 aa2.6□□□□□ -1.99
RNU6-538P-201ENST00000622329 TRGV1A0A0A0MS02 117 aa2.6□□□□□ -1.99
RNU6-538P-201ENST00000622329 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
RNU6-538P-201ENST00000622329 SIPA1L3O60292 1781 aaPredicted RBP2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 TNRC6BQ9UPQ9 1833 aaKnown RBP2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 TIAM1Q13009 1591 aa2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 TRAV1-2A0A0B4J238 106 aa2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 PRB2P02812 416 aaPredicted RBP2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 SMIM5Q71RC9 77 aa2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 CCL19Q99731 98 aa2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 PLAC8Q9NZF1 115 aa2.59□□□□□ -1.99
RNU6-538P-201ENST00000622329 C1orf167Q5SNV9 1468 aa2.58□□□□□ -2
RNU6-538P-201ENST00000622329 LMTK2Q8IWU2 1503 aa2.58□□□□□ -2
RNU6-538P-201ENST00000622329 PP632Q6XCG6 107 aa2.58□□□□□ -2
RNU6-538P-201ENST00000622329 TET1Q8NFU7 2136 aa2.58□□□□□ -2
RNU6-538P-201ENST00000622329 COL5A1P20908 1838 aaPredicted RBP2.58□□□□□ -2
RNU6-538P-201ENST00000622329 NKTRP30414 1462 aaKnown RBP2.58□□□□□ -2
RNU6-538P-201ENST00000622329 PHRF1Q9P1Y6 1649 aaKnown RBP2.57□□□□□ -2
RNU6-538P-201ENST00000622329 ITSN1Q15811 1721 aa2.57□□□□□ -2
RNU6-538P-201ENST00000622329 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
RNU6-538P-201ENST00000622329 C3orf79P0CE67 100 aa2.57□□□□□ -2
RNU6-538P-201ENST00000622329 HILPDAQ9Y5L2 63 aa2.57□□□□□ -2
RNU6-538P-201ENST00000622329 MYO7BQ6PIF6 2116 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 TRBV7-4A0A0J9YYF1 115 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 ACYP2P14621 99 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 C10orf99Q6UWK7 81 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 UNQ6190/PRO20217Q6UXQ8 127 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 OBSCN-AS1Q96MR7 158 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 URB2Q14146 1524 aaKnown RBP2.56□□□□□ -2
RNU6-538P-201ENST00000622329 ZMYM4Q5VZL5 1548 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 CCDC180Q9P1Z9 1646 aa2.56□□□□□ -2
RNU6-538P-201ENST00000622329 A0A1B0GUT8 65 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 H3BVH4 76 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 ATP7BP35670 1465 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 DEFB107AQ8IZN7 70 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 TMEM263Q8WUH6 116 aaKnown RBP2.55□□□□□ -2
RNU6-538P-201ENST00000622329 LINC00472Q9H8W2 130 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 CD163L1Q9NR16 1453 aa2.55□□□□□ -2
RNU6-538P-201ENST00000622329 H0Y9P7 68 aa2.54□□□□□ -2
RNU6-538P-201ENST00000622329 J3QRE1 110 aa2.54□□□□□ -2
RNU6-538P-201ENST00000622329 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
RNU6-538P-201ENST00000622329 ZCCHC13Q8WW36 166 aaKnown RBP2.54□□□□□ -2
RNU6-538P-201ENST00000622329 ICE1Q9Y2F5 2266 aa2.54□□□□□ -2
RNU6-538P-201ENST00000622329 RAPGEF6Q8TEU7 1601 aa2.53□□□□□ -2
RNU6-538P-201ENST00000622329 PLXNC1O60486 1568 aa2.53□□□□□ -2
RNU6-538P-201ENST00000622329 ABCA9Q8IUA7 1624 aa2.53□□□□□ -2
RNU6-538P-201ENST00000622329 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
RNU6-538P-201ENST00000622329 GNG13Q9P2W3 67 aa2.52□□□□□ -2.01
RNU6-538P-201ENST00000622329 SHPRHQ149N8 1683 aa2.52□□□□□ -2.01
RNU6-538P-201ENST00000622329 CEP170BQ9Y4F5 1589 aaPredicted RBP2.52□□□□□ -2.01
RNU6-538P-201ENST00000622329 NUP188Q5SRE5 1749 aa2.51□□□□□ -2.01
RNU6-538P-201ENST00000622329 CRYBG1Q9Y4K1 1723 aa2.51□□□□□ -2.01
RNU6-538P-201ENST00000622329 ZNF236Q9UL36 1845 aa2.51□□□□□ -2.01
RNU6-538P-201ENST00000622329 IFT172Q9UG01 1749 aa2.51□□□□□ -2.01
RNU6-538P-201ENST00000622329 ZFHX3Q15911 3703 aa2.51□□□□□ -2.01
RNU6-538P-201ENST00000622329 CDC42BPGQ6DT37 1551 aa2.5□□□□□ -2.01
RNU6-538P-201ENST00000622329 TRBV30A0A0K0K1B3 111 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms